prot_Ecto-sp13_S_contig15713.4213.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15713.4213.1
Unique Nameprot_Ecto-sp13_S_contig15713.4213.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length318
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15713.4213.1 vs. uniprot
Match: D8LFL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL5_ECTSI)

HSP 1 Score: 443 bits (1140), Expect = 1.870e-153
Identity = 296/315 (93.97%), Postives = 301/315 (95.56%), Query Frame = 0 
Query:    1 DSSFVENAAGKGGSGGGIWVEDGAKAVLARTEFVNNTAASSYTHKGAGGGIAVSASASLTMSDGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQATTXXXXXXXXXXXXXXXXXXXAFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFASPSFTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPPTFVNCTFTSNIAGSGGVPADGNALGRGRRQGHGIGGALAAIASSPLLTGCSFWNNSAVAVFPSSGE 315
            DSSFV NAAGKGGSGGGIWVEDGAKAVLART+FVNNTAASSYTHKGAGGG+AVSASASLTMS+GCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQAT    XXXXXXXXXXXXXX  AFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFA P FTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ETPPPTFVNC FTSNIAGSGGVP DGNALGRG RQGHGIGGALAAIASSPLL+GCSFWNNSAVAVFPSS +
Sbjct:   60 DSSFVANAAGKGGSGGGIWVEDGAKAVLARTKFVNNTAASSYTHKGAGGGVAVSASASLTMSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQATAAVAXXXXXXXXXXXXXX--AFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFAFPRFTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ETPPPTFVNCKFTSNIAGSGGVPTDGNALGRGFRQGHGIGGALAAIASSPLLSGCSFWNNSAVAVFPSSSD 371
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15713.4213.1 vs. uniprot
Match: D7FTH4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH4_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 4.800e-138
Identity = 295/312 (94.55%), Postives = 299/312 (95.83%), Query Frame = 0 
Query:    1 DSSFVENAAGKGGSGGGIWVEDGAKAVLARTEFVNNTAASSYTHKGAGGGIAVSASASLTMSDGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQATTXXXXXXXXXXXXXXXXXXXAFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFASPSFTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPPTFVNCTFTSNIAGSGGVPADGNALGRGRRQGHGIGGALAAIASSPLLTGCSFWNNSAVAVFPS 312
            DSSFV NAAGKGGSGGGIWVEDGAKAVLART+FVNNTAASSYTHKGAGGG+AVSASASLTMS+GCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQAT    XXXXXXXXXXXXXX  AFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFA P FTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ETPPPTFVNC FTSNIAGSGGVP DGNALGRG RQGHGIGGALAAIASSPLL+GCSFWNNSAVAVFPS
Sbjct:  455 DSSFVANAAGKGGSGGGIWVEDGAKAVLARTKFVNNTAASSYTHKGAGGGVAVSASASLTMSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQATAAVAXXXXXXXXXXXXXX--AFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFAFPRFTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ETPPPTFVNCKFTSNIAGSGGVPTDGNALGRGFRQGHGIGGALAAIASSPLLSGCSFWNNSAVAVFPS 763
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15713.4213.1 vs. uniprot
Match: A0A6H5K5Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q8_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.250e-82
Identity = 212/256 (82.81%), Postives = 220/256 (85.94%), Query Frame = 0 
Query:   61 MSDGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQATTXXXXXXXXXXXXXXXXXXXAFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFASPSFTGCNFTGNAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ETPPPTFVNCTFTSN-IAGSGGVPADGNALGRGRRQGHGIGGALAAIASSPLLTGCSFWNNSAVAVFPS 312
            MS+GCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAI+LSGVS+RRNRCETGALDAGCSGGAVSLTGRGPQATT    XXXXXXXXXXX     FDDCLFE NEARGAATNNVYSGAGQGGAAAIRFA P FTGCNFTGN AEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ETPPPTFV+  F+   + G  G+P            GHGIGGALAAIASSPLL+GCSFWNNSAVAVFPS
Sbjct:    1 MSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAISLSGVSMRRNRCETGALDAGCSGGAVSLTGRGPQATTAVAGXXXXXXXXXXXA---TFDDCLFERNEARGAATNNVYSGAGQGGAAAIRFAFPRFTGCNFTGNVAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPPTFVSVGFSRRAVVGRSGIP------------GHGIGGALAAIASSPLLSGCSFWNNSAVAVFPS 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15713.4213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFL5_ECTSI1.870e-15393.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTH4_ECTSI4.800e-13894.55Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K5Q8_9PHAE1.250e-8282.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 5..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15713contigEcto-sp13_S_contig15713:1437..3953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15713.4213.1mRNA_Ecto-sp13_S_contig15713.4213.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15713 1437..3953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15713.4213.1 ID=prot_Ecto-sp13_S_contig15713.4213.1|Name=mRNA_Ecto-sp13_S_contig15713.4213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp
DSSFVENAAGKGGSGGGIWVEDGAKAVLARTEFVNNTAASSYTHKGAGGG
IAVSASASLTMSDGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAIT
LSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQATTAAAAGDEDNNNNDN
DSGGAAFDDCLFEGNEARGAATNNVYSGAGQGGAAAIRFASPSFTGCNFT
GNAAEGGGGAAPATGGAVLLFLSRGGGSSAAAAAAAAATSDGGMETPPPT
FVNCTFTSNIAGSGGVPADGNALGRGRRQGHGIGGALAAIASSPLLTGCS
FWNNSAVAVFPSSGEDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence