mRNA_Ecto-sp13_S_contig1570.4208.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: D8LRP2_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP2_ECTSI) HSP 1 Score: 971 bits (2509), Expect = 0.000e+0 Identity = 560/578 (96.89%), Postives = 566/578 (97.92%), Query Frame = 3
Query: 510 TELETKIRGLHNREKHSSADLDITREELKSIGKHQEAAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA 2243
TELETKIRGL NREKHSSADLDITREELKSIGKHQEAAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQL+DMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALE+LRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXX HSEENSSMEGGARSSGASGMSLXX GTQGSSTAHFSQA NASV+EDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRR +++ AYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRF DMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA
Sbjct: 721 TELETKIRGLANREKHSSADLDITREELKSIGKHQEAAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLKDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKMEELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEQLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXX---HSEENSSMEGGARSSGASGMSLXXXXGTQGSSTAHFSQAQNASVKEDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRYDTFMQAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA 1295
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A4D9CMM9_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMM9_9STRA) HSP 1 Score: 377 bits (967), Expect = 8.510e-109 Identity = 254/592 (42.91%), Postives = 369/592 (62.33%), Query Frame = 3
Query: 465 AFQGTPEPIPQGMTKTELETKIRGLHN-REKHSSADLDIT--REELKSIGKHQEAAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKL-KKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLE 2228
A + + I +G +K L K L+ R + ++ D + + +K + +AAE KV A VS + + ++ +++AVE+++FA F K++ +IR +EE +L+ M+E + L+ HR KL AQL +E RDF+ PL K K+ A + E++ + L ++E+ + EA EA AK + + V+ R V R I+ +I EESALE++RA++H +LQ+ARV++V LP++ XXXXXXXXXXXXXX SE S M+ + G++ + SG G ++ H SQ+ +R+DR++ ++D S L KK + AK LE Y ++ ELQ ++ +M PNMRA+E++ ++S R+K +G +E +K+ A + ++ ++Q R ++ + VSD L +IYKDLT+SSKHPLGG A+LSLD+ +EPYLGGV +NAMPPMKRF DMEQLSGGEKTVAAL LLFAIHS+RPAPFFV+DE+DAALDN+NV+KVC+YI+ RSG+FQ +VISLKDMFYE A+ALVG+CRD A+N SRTLTLDL+
Sbjct: 700 ALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKATGKVQTAQDALSARVSTRQKEMEEVRTRMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPML------------------DNAEDXXXXXXXXXXXXXXXSEAGSGMK---KLRGSTSTASSSFSGG-GEASTHPSQSQAPRIRKDRKELDKIDFSSLPKKEKVAKARDELETTRKRYHDRIAELQGEVEKMQPNMRALEKYEEMSRRVKEAGDEYEAAKKAAQESNALYSHLRQDRYEKFMDCFGHVSDALTSIYKDLTKSSKHPLGGQAYLSLDDSDEPYLGGVAYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIHSYRPAPFFVLDEVDAALDNVNVRKVCHYIKQRSGEFQCLVISLKDMFYENANALVGVCRDKASNGSRTLTLDLD 1269
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A7S2RI11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI11_9STRA) HSP 1 Score: 369 bits (948), Expect = 2.710e-108 Identity = 235/575 (40.87%), Postives = 330/575 (57.39%), Query Frame = 3
Query: 513 ELETKIRGLHNREKHSSADLDITREELKSIGKHQEAAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELED----QHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 2225
EL+T+I L ++E+ + D +T+E+++ + K +A + + + E+ + +S E ++ +LQ+K+D E+ V F + +G +D++ FEE ++E R +L++ ++KLEAQL +E +R FD + K K+ K L D QH + + + ++E + + A K+ E E KA + R ER +K+I +EE +E+LR LH VL +ARVEQ+ LP G + + S S AS L S TAH +D S+L +H+ A D + V S + ++ L I M PNM+A ERF DVS R KAS + F+Q++++A A FN+VKQ+R ++++ +N V+ L TIY+DLT+ HPLGGNA+LSLD+ EEP+LGG+K+NAMPP+KRF DMEQLSGGEKTVAAL LLFAIHSFRPAPFFVMDE+DAALDN+NV KVCNYI+ RS DFQ IVISLKDMFY AD+LVGICRD T+SSRTLTLDL
Sbjct: 473 ELQTRITHLTSKEQFALKDQSVTQEKIRGLKKQLDALKKQKGETQREVSRLKPVLSEREGAIGTLQSKIDRSEHAVLQAFSEELGITDLQQFEERYQRSVKEAAAGRRRLREQKAKLEAQLEYEEARSFDQSVRKAQGKVEKTSKRLGDAKDTQHRLKASVKDLRDQLQQSESSLHEVNRAVKD----KEVEAKALQAERTAAAAERGARAKKITAEEIRIEQLRGSLHSVLHKARVEQIELPWTTG---------------------------------TPRDDASQSSTSSRAPSSASNSQLESQQALLDSQTAH-----------------RIDFSQLTRHKDAMDDKQRAAVTSEFEAEIAVLDTAIASMQPNMKATERFEDVSVRHKASTEEFDQARESARDAASLFNDVKQKRHDAFMACFNHVAHELQTIYQDLTKDPNHPLGGNAYLSLDDSEEPFLGGIKYNAMPPLKRFRDMEQLSGGEKTVAALALLFAIHSFRPAPFFVMDEVDAALDNVNVSKVCNYIRHRSQDFQCIVISLKDMFYAHADSLVGICRDVGTDSSRTLTLDL 993
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A6H5L4W0_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W0_9PHAE) HSP 1 Score: 342 bits (877), Expect = 6.370e-108 Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 3
Query: 1590 MQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLK 2138
MQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQ R +++ AYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRF DMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLK
Sbjct: 1 MQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQLRYDTFMQAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLK 183
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A7S3YCQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCQ0_HETAK) HSP 1 Score: 336 bits (862), Expect = 3.280e-103 Identity = 190/384 (49.48%), Postives = 252/384 (65.62%), Query Frame = 3
Query: 1074 EVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 2225
E++ ++K KE+ I ++ SEE L++LR+KLH VLQ+ARV+QV L GG E ++ M+ S + S Q + T S A ++D +L +D S+LK HR K + LEE++ Y ++M +QA+ +M PNM+A E+F +++DRLK SG+ F +K NA + L FN++K++R +++ +N + D LN+ Y+DLT+SSKHPLGG A+L+LD+PEEPYL GVKFNAMPPMKRF DMEQLSGGE+TVA+L LLF++HSFRPAPFFVMDEIDAALDNINVKKVCNYI+ RSGD QSIVISLKDMFYE+AD+LVG+CRD AT SR+LTLDL
Sbjct: 2 ELRVLQQEKEKASKEKAKIGRKAASEEIQLDRLRSKLHDVLQQARVDQVDLSGTTKKRTRGGEEK---------------------------ENDDDMMQIKLPESQMTMASETEADTLQVTQTTDNSDA----QQQDDGASLMIDFSRLKNHRNIKSNEHLEEILQKYVEEMSAIQAECEKMQPNMKAFEKFDNLTDRLKDSGKDFSNAKDNAQASALAFNKIKEKRHTAFMQCFNHIKDTLNSTYRDLTKSSKHPLGGTAYLTLDDPEEPYLAGVKFNAMPPMKRFRDMEQLSGGERTVASLALLFSVHSFRPAPFFVMDEIDAALDNINVKKVCNYIKRRSGDCQSIVISLKDMFYERADSLVGVCRDRATMGSRSLTLDL 354
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: K8Z3L9_NANGC (Regulator of chromosome condensation-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3L9_NANGC) HSP 1 Score: 343 bits (879), Expect = 5.900e-103 Identity = 213/505 (42.18%), Postives = 300/505 (59.41%), Query Frame = 3
Query: 717 VDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKL-KKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLE 2228
++AVE+++FA F K++ +IR +EE +L+ M+E + L+ HR KL AQL +E RDF+ PL K K+ A + E+ + L ++E+ + EA EA AK + + V+ R V R I+ +I EESALE++RA++H +LQ+ARV++V LP++ ++EE X S+AG+ +D S L KK + AK LE Y ++ +LQ ++ +M PNMRA+E++ ++S R+K +G +E +K+ A + ++ ++Q R ++ + VSD L +IYKDLT+SSKHPLGG A+LSLD+ +EPYLGGV +NAMPPMKRF DMEQLSGGEKTVAAL LLFAIHS+RPAPFFV+DE+DAALDN+NV+KVC+YI+ RSG+FQ +VISLKDMFYE A ALVG+CRD A+N SRTLTLDL+
Sbjct: 97 MEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIRTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPML------------------------------------DNTEEGE-----------------XXXXXXXXXXXXXSEAGSG-----------IDFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKEAGDEYEAAKKAAQESNALYSHLRQDRYEKFMDCFGHVSDALTSIYKDLTKSSKHPLGGQAYLSLDDSDEPYLGGVAYNAMPPMKRFRDMEQLSGGEKTVAALALLFAIHSYRPAPFFVLDEVDAALDNVNVRKVCHYIKQRSGEFQCLVISLKDMFYENATALVGVCRDKASNGSRTLTLDLD 537
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A835ZAW7_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW7_9STRA) HSP 1 Score: 363 bits (931), Expect = 6.500e-103 Identity = 263/589 (44.65%), Postives = 353/589 (59.93%), Query Frame = 3
Query: 510 TELETKIRGLHNREKHSSADLDITREELKSIGKHQE--AAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREK----------------------SIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRS--GDFQSIVISLKDMFYEKADALVGICRDHATN 2198
+EL T+++GL NR+ +S AD+ + ++L S+ K ++ A+++ ++ A ++A +S LE + L++K+ E+ +FA FLK VG S +R FEEG + ++ + R++L QHR+KLEAQL +ER RDF PLDK+T K A+R + K +L E+E+ ++M +E KE A E EV+A S RQK KER I K+ +EE+ALE+LRA+LH VLQ A VE+V LP+ A G XXXXXXXXXXXXXXXXXXXX + ++ Q S HFSQA + +V++D+E VDL +LKKHR A L+E ++LK SG +FE +K + A KF+++K RR + A+N ++ L IYK+LTRSSKHPLGG A LSLD+ EEPY GG+KF+AMPP KR DM+QLSGGE+TVAAL LLFAIHS+RPAPFFVMDEIDAALDNINVKKVC++I+ R+ G FQSIVISLKDMFYE+++ALVGICRD +TN
Sbjct: 805 SELRTRLQGLRNRQSYSKADMQVCDDKLSSLNKQEKLITAQVEASR-KASTKAKDA-LSSLEKGVAKLESKLQKAEDAIFADFLKEVGVSSVRDFEEGPMRAVRGLTRERLRLTQHRAKLEAQLEYERGRDFQKPLDKITAKAAAKRAAAVEAEKKGADLKEKEERPRLSMKHIDGACTLVARMYAQTLMRKAEELDGVVKERKEAAGAKEKEVRAVQSERQKRAKERASIGKKTTAEETALERLRARLHEVLQRAAVEEVDLPMKDQPEDADGDRSTXXXXXXXXXXXXXXXXXXXXRQLSADTSQS-----------------------QQESGPHFSQAESRTVQKDKEATARVDLDQLKKHRRVSSAHELQE---------------------------------EKLKESGASFEAAKGRSKTAAQKFDDIKDRRRDLFEDAFNHIAKELVVIYKELTRSSKHPLGGQASLSLDDQEEPYNGGIKFSAMPPGKRLRDMDQLSGGERTVAALALLFAIHSYRPAPFFVMDEIDAALDNINVKKVCHFIESRAAQGAFQSIVISLKDMFYERSEALVGICRDASTN 1335
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A7S1Y3B1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y3B1_9STRA) HSP 1 Score: 344 bits (883), Expect = 1.730e-99 Identity = 235/578 (40.66%), Postives = 319/578 (55.19%), Query Frame = 3
Query: 513 ELETKIRGLHNREKHSSADLDITREELKSIGKHQEAAEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVV-SGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRS-GDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGE 2240
EL + + L NR + S +DL+ T +LK A + ++ +L + E D++ + + V E+E PF ++ G D++++EE + +E K + + +H +KLE Q +E +RDF + + ++I R+ L+ K EL E+ + +EA + ER ISK I EESALE+LR+KLH LQ+ARVE+V LP TLA H EE + + L +GT HFSQ+ +A V ++R A +D SKL + + E + + Q+ +L A I M+PNM+A E F V+ +LK S F+++K +A A F +VK RA + A+ + + L TIY D+T+SSKHPLGGNA+LSLD+ EEPY GG+KFNAMPPMKRF DMEQLSGGEKTVAAL LLFAIHSFRPAPFFVMDE+DAALDN+N++KVCNYI+ RS DFQ IVISLKDMFYE+++ LVGICRD TNSSRTLTLDL E
Sbjct: 276 ELRSSLGNLRNRNRFSKSDLEFTTSKLKEKETLVTAKDKRLRQLKPQLKKVEKDITGXXXXVEAAAKAVKDAEDEHLGPFREATGLRDLKAYEEAVGKSREEHAKKKQSVVEHITKLEQQKNYEANRDFQANITRTEKRIATRKTNLKAAKKKEKELKEQVDAARAVLEEAXXXXXXXXXXXXXXXXXXXXXQVVFSEAQAERKKISKAITEEESALERLRSKLHETLQKARVEEVDLP-----TLA------------------QSPAGRTRSSQATHQEEEXXXXEMTSTQAGTSSQLSQETGT-----VHFSQSDDARVIKERRAANRIDFSKLSNALKQRVSDREERKMRKDFEDQIAKLTADIGGMSPNMKAEEAFDAVTGKLKESSTDFDKAKSDARKAAAAFQKVKNNRARRFNDAFQHIDEALKTIYTDMTKSSKHPLGGNAYLSLDDTEEPYKGGMKFNAMPPMKRFRDMEQLSGGEKTVAALSLLFAIHSFRPAPFFVMDEVDAALDNVNLRKVCNYIRQRSESDFQCIVISLKDMFYERSEGLVGICRDVGTNSSRTLTLDLSKFRE 825
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: K0R031_THAOC (SMC_N domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R031_THAOC) HSP 1 Score: 322 bits (825), Expect = 2.260e-95 Identity = 207/536 (38.62%), Postives = 309/536 (57.65%), Query Frame = 3
Query: 621 AEIDRAKVNAELGEREADVSRLEASLLSLQNKVDAVENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGARSSGASGMSLXXVSGTQGSSTAHFSQAGNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVVSG-YRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 2225
A +++ + AE G ++A E + KV VE+E FAPF + G D+R+++E + ++ K R +++H +KL A+ +E +DF+ LDK +K ++L + +L + + A + + + V I+K + +EE L LR+KLH LQ+ARV++V LP++ S+++ + +G S SG SL + + + + HFSQ + +R DR++A VD S + + + +Q EE + + ++ +L +I + PNM+A + F ++++++K+ F+ +K+ A KFN+V++ RA + +A+ + L IY D+T+SSKHPLGGNA+LSLD+ +EPYL G+KFNAMPPMKRF DMEQLSGGEKTVAAL LLFAIHSFRPAPFF+MDE+DAALDN+NV KVCNYIQ RS DFQ IVISLKDMFYE++++LVGICRD ++NSSRT+TLDL
Sbjct: 11 ANLEKKQAEAEEGVKDASEEAEER-----RQKVRDVEDEHFAPFREETGIKDLRAYDEAIGKAREDFVKQRTDVREHLAKLTAKKKYEDDKDFEAKLDKAQKKKEKTEEDLAEAIETEEKLSSKVAEVKXXXXXXXXXXKLAMDAEKEKDEVVXXXXXXXXXXXXXXXKITKSMNNEEGDLAVLRSKLHETLQKARVDEVELPML--------------------------------DEDDVPSDDDDTDKGSESRSRFSG-SLSQSNTQESAFSTHFSQRESNKIRLDRKEASRVDFSNMDEDLKTRRSQAEEEKLQKKFESKISKLNQEIEGIAPNMKAADAFNEITEKVKSGMDEFDTAKETGRNATDKFNKVRKARASKFNTAFKKIDAALKVIYTDMTKSSKHPLGGNAYLSLDDTDEPYLSGMKFNAMPPMKRFRDMEQLSGGEKTVAALSLLFAIHSFRPAPFFIMDEVDAALDNVNVLKVCNYIQQRSSDFQCIVISLKDMFYERSESLVGICRDVSSNSSRTMTLDL 508
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Match: A0A7S4K6L1_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6L1_9STRA) HSP 1 Score: 338 bits (868), Expect = 7.580e-95 Identity = 225/528 (42.61%), Postives = 304/528 (57.58%), Query Frame = 3
Query: 684 LEASLLSLQNKVDAV---ENEVFAPFLKSVGASDIRSFEEGQLEDMQEQYKARMKLQQHRSKLEAQLAHERSRDFDGPLDKLTRKINARRKELEDQHVKM*ELVEREKSIMEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEESALEKLRAKLHGVLQEARVEQVALPLVGGGTLAGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEENSSMEGGA-----RSSGASGMSLXXVSGTQGSST--AHFSQAGNASVREDREKALEVDLS----KLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDVSDRLKASGQTFEQSKQNAAGAVLKFNEVKQRRALSYLSAYNLVSDNLNTIYKDLTRSSKHPLGGNAFLSLDNPEEPYLGGVKFNAMPPMKRFCDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 2225
+EA+ + + AV E E F PF + G SD R+++E + +E K R +++H +KL ++ +E +RDF+GP+ K +++ R+ +LE E + V+ + E+ + K I +EESALE+LR KLH LQ+ARVE+V LP++ + GE S + SS GG RS G SG ST AHFSQ +A V+ DR +A +VD + +L++ +D + L++ + ++ +L I M+PN+RA + F ++RLK S F ++K A A FN++K+ RA + A+N V D L TIY D+T+SSKHPLGGNA+LSLD+ EEP+ GG+KFNAMPPMKRF DMEQLSGGEKTVAAL LLFAIHS+RPAPFFVMDE+DAALDN+NV KVCNYI+ RS DFQ IVISLKDMFYE++ +LVGICRD TNSSRTLTLDL
Sbjct: 803 VEATSAKVDEYIRAVKDAEEEHFGPFREETGLSDFRAYDEAMGKAREEYMKKRRSVREHLAKLTSKKEYEDNRDFEGPIAKAEKRLEERKAKLEKAEENETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAVVQDRQKDHGDALAEQQRVRKAINTEESALERLRGKLHESLQKARVEEVELPII-----SSSGEPSTLTS----------------------SSQPSSGSGGPAPDEIRSEGMSGSGSGGTQSMSQMSTVSAHFSQRDDARVQRDRREAGKVDFAQLSGRLQQRVSDRDEKKLKKE---FEDKISKLAGDIASMSPNLRAGDAFETCTERLKESNDEFTKAKSQARKAAHAFNKIKKERAARFNDAFNHVDDALKTIYTDMTKSSKHPLGGNAYLSLDDAEEPFRGGIKFNAMPPMKRFRDMEQLSGGEKTVAALALLFAIHSYRPAPFFVMDEVDAALDNVNVLKVCNYIRQRSDDFQCIVISLKDMFYERSRSLVGICRDVGTNSSRTLTLDL 1300 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1570.4208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1570.4208.1 >prot_Ecto-sp13_S_contig1570.4208.1 ID=prot_Ecto-sp13_S_contig1570.4208.1|Name=mRNA_Ecto-sp13_S_contig1570.4208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=414bp MEAEDEAAKEHLAAKEVARRHEGEVKAAHSGRQKLVKERDGISKRIMSEEback to top mRNA from alignment at Ecto-sp13_S_contig1570:3724..16080- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1570.4208.1 ID=mRNA_Ecto-sp13_S_contig1570.4208.1|Name=mRNA_Ecto-sp13_S_contig1570.4208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1570:3724..16080- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1570:3724..16080- >mRNA_Ecto-sp13_S_contig1570.4208.1 ID=mRNA_Ecto-sp13_S_contig1570.4208.1|Name=mRNA_Ecto-sp13_S_contig1570.4208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1242bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1570:3724..16080- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |