mRNA_Ecto-sp13_S_contig1569.4204.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1569.4204.1
Unique Name	mRNA_Ecto-sp13_S_contig1569.4204.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A6H5L845_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L845_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 5.020e-185
Identity = 246/265 (92.83%), Postives = 253/265 (95.47%), Query Frame = 1

Query:  124 MDRRHSSCLCFTCHSQSPHLAARQRNTHSNQWMSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEFRNRLAPFLAQSIGNMRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDQDG 918
            M  RHSSCLCF C+SQ  +LAARQRNTH NQWMSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSG QAGFLRAER PRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPIA+PVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEE+IEMNWRSWDTD+NGTLDTAEFRNRLAPFLAQSIGNMRQRI  QLPDL +QPAEWFK+WDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPD DG
Sbjct:    1 MHGRHSSCLCFACNSQPTYLAARQRNTHRNQWMSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGHQAGFLRAERLPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPIADPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEVIEMNWRSWDTDSNGTLDTAEFRNRLAPFLAQSIGNMRQRIIRQLPDLMNQPAEWFKHWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDGDG 265

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: D7FYD8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD8_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 2.410e-64
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  220 MSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQ 516
            MSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAER PRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPI +PVRWFHVVDRDQ
Sbjct:    1 MSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERLPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPITDPVRWFHVVDRDQ 99

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: D7FYD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD7_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.010e-44
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 1

Query:  703 MRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDQDG 918
            MRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPD+DG
Sbjct:    1 MRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDEDG 72

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A0G4H6Z1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H6Z1_9ALVE)

HSP 1 Score: 141 bits (355), Expect = 2.950e-35
Identity = 89/271 (32.84%), Postives = 130/271 (47.97%), Query Frame = 1

Query:  133 RHSSCLCFTCHSQSPHLAARQRNTHSNQWMSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTII---PRKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEF---RNRLAPFLAQSIGNMRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFA---AIWSIIDPDQDG 918
            RHS     T    +  L    R T +   M + D      Y EC +CF+ L  +  +V+                 RR C+H   + C   +     + CP+CRRDF  TLDVPDP  +P  WF VVD D NG +++ E+++ LK   PV+   LE  ++  WR WD D +G +   E    +  L  ++   +   R R  P  PD++ + + WF+YWDE+ +GSL++ E+ RA IKT      RD   + G  A   A+W   DPD  G
Sbjct:  141 RHSIATDHTHQLPATGLGIPPRITSTTSTMRSCDANEE--YAECPICFDELYKEPQAVLTWRG-------------RRCCQHVFHKRCVGDMRRARQKHCPLCRRDFDDTLDVPDPTKDPRGWFRVVDLDGNGKLDRKEVIEVLKAALPVDWKKLEARLDNLWRQWDLDGSGFISEREMLDPQRGLLVWVRNHMDVRRNRGPP--PDIRREKSGWFRYWDENSNGSLDKEEVCRAFIKTFN--LSRDSEKVAGVRALLDALWVEFDPDGSG 392

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A4S2X8_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S2X8_OSTLU)

HSP 1 Score: 134 bits (338), Expect = 2.370e-33
Identity = 82/258 (31.78%), Postives = 128/258 (49.61%), Query Frame = 1

Query:  190 RQRNTHSNQWMSTMD--------LEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTI---IPRKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEF--RNRLAPFLAQSIGNMRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKT--IPEFTGRDEGWLGGTFAAIWSIIDPDQDG 918
            R R +  + W  T D        L ++  + EC  CFE LC +  +V VD SG             R C+HFL + CA  +   I   CP+CR  F S   VP P  +   WF + D D NG ++K +++  ++   PV+   +++ +   W  WD +++G L  A+    + L  F+++     R R    +P + D+ A WFK+WDED+SG+LE+ E+VRALIKT  I +     +  +     +IW + D D  G
Sbjct:   58 RSRRSTDDVWCGTSDDEGSARGGLHVSEDHQECGACFEPLCKERTAVFVDESGA------------RTCKHFLHERCARAVCEHIGSVCPICRTAFASARGVPFPTEDANEWFRLCDVDGNGKLDKEQVLTVIRAQIPVDWRKIDKDLGSLWARWDPESSGALGKAQLVGADGLLEFVSKKYPP-RLREYKHVPHVTDKRA-WFKFWDEDDSGTLEKDEVVRALIKTFGIKDDVAHIQD-VRSMVESIWCVFDLDDSG 300

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A7J6NT57_PEROL (RING-type domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NT57_PEROL)

HSP 1 Score: 130 bits (328), Expect = 2.390e-30
Identity = 76/221 (34.39%), Postives = 110/221 (49.77%), Query Frame = 1

Query:  235 LEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIP--------------RKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEF---RNRLAPFLAQSIGNMRQR---ITPQ-LPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTI 834
            L +A  Y EC+VC+  L                G LR++   +R C H+   EC   ++               R+CP+CR  F     +PD   +P  WF + D D  GS++K E++ AL  + PVE   L E IE NW  WD DN+G++   EF   R  L  +L ++   ++     I P  +PDL   P EWF +WD + +GSLER EIVRA+++T 
Sbjct:  140 LSLAERYNECAVCYFELYRL-----------PVGILRSQS--KRACSHYFHTECIKRLVAKNAHEARNAGHAAVRECPICRAKFSDIKTLPDVFKDPRAWFQLCDIDCGGSLDKEEVLGALGAVLPVERDKLAEAIEENWVVWDPDNDGSITLTEFVEPRRGLREYLLRNFNVIKTENLNIRPDDIPDLDSHPLEWFNFWDGNGNGSLERSEIVRAIVRTF 347

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A7S0VT66_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VT66_9CRYP)

HSP 1 Score: 126 bits (317), Expect = 2.590e-30
Identity = 73/232 (31.47%), Postives = 114/232 (49.14%), Query Frame = 1

Query:  244 AAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECA-----PTIIPRKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEFRNRLAPFLAQSIGNMRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKT--IPEFTGRDEGWLGGTFAAIWSIIDPDQDG 918
            A  Y EC VCF+ +  + A V  D  G            +R C HFL   CA       +  R+CPVCR +F    +VP    +P  WF +VD + +G + + E+V+ LK   P++   LE  +   W++WD +++  +   E  +     LA    N  ++    +PD++     WF+Y+D D+SG+LE+ E+VRALIKT  + E   R    +     A+W + D D  G
Sbjct:  105 ALEYAECVVCFDDMYKEQAGVFCDARG------------KRTCAHFLHHRCALEVRSSNVGGRRCPVCRAEFQDVSEVPGIDDDPNEWFKIVDLNGDGRLSQREVVEVLKAQLPIDYRRLEAELPELWKTWDVNHDNIITRTELLDPRRGLLAYVKQNFPRQDQADIPDIRTDKQGWFRYFDYDQSGTLEQGEVVRALIKTFRLSEDHSRINS-MREIVNAVWGVFDFDNSG 323

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A7J6M912_PEROL (RING-type domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M912_PEROL)

HSP 1 Score: 129 bits (325), Expect = 3.180e-30
Identity = 75/221 (33.94%), Postives = 110/221 (49.77%), Query Frame = 1

Query:  235 LEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIP--------------RKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEF---RNRLAPFLAQSIGNMRQR---ITPQ-LPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTI 834
            L +A  Y EC+VC+  L                G LR++   +R C H+   EC   ++               R+CP+CR  F     +PD   +P  WF + D D  G+++K E++ AL  + PVE   L E IE NW  WD DN+G++   EF   R  L  +L ++   ++     I P  +PDL   P EWF +WD + +GSLER EIVRA+++T 
Sbjct:  123 LSLAERYNECAVCYFELYRL-----------PVGILRSQS--KRACSHYFHTECIKRLVAKNAHEARNAGHAAVRECPICRAKFSDIKTLPDVFKDPRAWFQLCDIDCGGTLDKEEVLGALGAVLPVERDKLAEAIEENWVVWDPDNDGSITLTEFVEPRRGLREYLLRNFNVIKTENLNIRPDDIPDLDSHPLEWFNFWDGNGNGSLERSEIVRAIVRTF 330

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A7J6LQN2_PERCH (RING-type domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LQN2_PERCH)

HSP 1 Score: 123 bits (308), Expect = 1.230e-27
Identity = 72/221 (32.58%), Postives = 105/221 (47.51%), Query Frame = 1

Query:  235 LEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIPR--------------KCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEF---RNRLAPFLAQSIGNMRQ---RITPQ-LPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTI 834
            L IA  + ECSVC+  L                G LR +   RR C H+   EC   ++ +              +CP+C   F     +PD   +P  WF + D D  G++++ E++ AL  + PV    L   IE NW  WD DN+G +   EF   R  L  +L ++  N++     + P  +PDL   P  WF +WD + +GSLER E+VRA+IKT 
Sbjct:  142 LSIAERFNECSVCYFELFRL-----------PVGILRLQS--RRACPHYFHTECIKRLVAKNASDARAAGYPSAQECPICGARFSEIKTLPDVFKDPRAWFQLCDIDSGGTLDQEEVLGALGAVLPVARDKLAVAIEDNWEVWDPDNDGVITLTEFVEPRRGLRQYLLRNFNNIKSDSVNLRPSDIPDLDSHPMAWFDFWDGNRNGSLERSEVVRAIIKTF 349

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BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Match: A0A7J6MPS5_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MPS5_PERCH)

HSP 1 Score: 114 bits (284), Expect = 7.080e-26
Identity = 73/246 (29.67%), Postives = 117/246 (47.56%), Query Frame = 1

Query:  244 AAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIP---RKCPVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEIIEMNWRSWDTDNNGTLDTAEFRNRLAPF-LAQSIGNMRQRITPQL-------PDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFA----------AIWSIIDPDQDG 918
            A  + EC++C++ L  K  + +   +G            RRVC H+   +C   ++    R+CP+CR  + S L +PD   +P  WF  VD + +G ++K E++  LK   P+    LE+  +  +R WD   +G +   ++R  + P  L   + +  +R T  L       P+L++  + WFKYWDED +G L+R E+ RALIKT         GW   +            A+W   D D DG
Sbjct:   60 AEEHAECAICYDTLPGKANAPVCVLTGSDG---------RRVCPHYFHVDCVKYMLSAGQRQCPLCRTPYRSYLTIPDIDMDPQGWFKAVDLNGDGKLDKQEVMFVLKSTLPINHQRLEKDFDKLFRRWDVSGDGYI---QYRELMGPGGLVSFVRSNFRRNTKDLSQGMSGMPNLRENKSAWFKYWDEDGNGVLDREEVTRALIKTF--------GWQRDSLDQNSTARMVIDALWCDFDTDGDG 285

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1569.4204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L845_9PHAE	5.020e-185	92.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYD8_ECTSI	2.410e-64	96.97	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
D7FYD7_ECTSI	1.010e-44	98.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A0G4H6Z1_9ALVE	2.950e-35	32.84	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A4S2X8_OSTLU	2.370e-33	31.78	Uncharacterized protein n=2 Tax=Ostreococcus sp. '...	[more]
A0A7J6NT57_PEROL	2.390e-30	34.39	RING-type domain-containing protein n=1 Tax=Perkin...	[more]
A0A7S0VT66_9CRYP	2.590e-30	31.47	Hypothetical protein n=1 Tax=Hemiselmis tepida Tax...	[more]
A0A7J6M912_PEROL	3.180e-30	33.94	RING-type domain-containing protein n=1 Tax=Perkin...	[more]
A0A7J6LQN2_PERCH	1.230e-27	32.58	RING-type domain-containing protein n=1 Tax=Perkin...	[more]
A0A7J6MPS5_PERCH	7.080e-26	29.67	Uncharacterized protein n=1 Tax=Perkinsus chesapea...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1569	contig	Ecto-sp13_S_contig1569:11046..16342 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	156.8
Seed ortholog evalue	1.4e-35
Seed eggNOG ortholog	296587.XP_002502215.1
Model size	919
Hectar predicted targeting category	other localisation
Exons	5
EggNOG OGs	2BZS4@1,2S2K6@2759
Cds size	795
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1569.4204.1	prot_Ecto-sp13_S_contig1569.4204.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1569 11046..16219 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462830.1718767-CDS-Ecto-sp13_S_contig1569:11045..11186	1681462830.1718767-CDS-Ecto-sp13_S_contig1569:11045..11186	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1569 11046..11186 -
1681462830.1819887-CDS-Ecto-sp13_S_contig1569:11702..11833	1681462830.1819887-CDS-Ecto-sp13_S_contig1569:11702..11833	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1569 11703..11833 -
1681462830.1924195-CDS-Ecto-sp13_S_contig1569:12669..12799	1681462830.1924195-CDS-Ecto-sp13_S_contig1569:12669..12799	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1569 12670..12799 -
1681462830.205036-CDS-Ecto-sp13_S_contig1569:13660..13783	1681462830.205036-CDS-Ecto-sp13_S_contig1569:13660..13783	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1569 13661..13783 -
1681462830.2197373-CDS-Ecto-sp13_S_contig1569:15949..16219	1681462830.2197373-CDS-Ecto-sp13_S_contig1569:15949..16219	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1569 15950..16219 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462830.2298653-UTR-Ecto-sp13_S_contig1569:16219..16342	1681462830.2298653-UTR-Ecto-sp13_S_contig1569:16219..16342	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1569 16220..16342 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1569:11046..16342-
coding sequence from alignment at Ecto-sp13_S_contig1569:11046..16342-

protein sequence of mRNA_Ecto-sp13_S_contig1569.4204.1

>prot_Ecto-sp13_S_contig1569.4204.1 ID=prot_Ecto-sp13_S_contig1569.4204.1|Name=mRNA_Ecto-sp13_S_contig1569.4204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp
MDRRHSSCLCFTCHSQSPHLAARQRNTHSNQWMSTMDLEIAAGYGECSVC
FEHLCAKGASVMVDGSGQQAGFLRAERPPRRVCRHFLCQECAPTIIPRKC
PVCRRDFVSTLDVPDPIANPVRWFHVVDRDQNGSIEKSELVDALKGMFPV
EPGALEEIIEMNWRSWDTDNNGTLDTAEFRNRLAPFLAQSIGNMRQRITP
QLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGG
TFAAIWSIIDPDQDG

mRNA from alignment at Ecto-sp13_S_contig1569:11046..16342-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1569.4204.1 ID=mRNA_Ecto-sp13_S_contig1569.4204.1|Name=mRNA_Ecto-sp13_S_contig1569.4204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5297bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1569:11046..16342- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCGTGGTGTGACACTGCCGCCAGGTCGGAGCCGCGGGGGGTCCGCAGCT
AGGATATTATCCGCGTCGTGGCGGGGTAACCAACAGGAAACTCAAACCCC
TTGGAGGTTGGCGTGCGGCCTCCATGGATAGGAGGCACTCTTCTTGTCTT
TGCTTTACCTGCCACAGCCAATCTCCTCACCTCGCTGCTAGGCAGAGAAA
CACTCACAGTAATCAGTGGATGAGCACGATGGACCTGGAGATCGCCGCCG
GGTACGGCGAGTGTAGCGTCTGCTTCGAACATCTCTGCGCCAAGGGAGCG
AGCGTGATGGTAGACGGCAGCGGGCAGCAGGCTGGCTTCTTGCGCGCCGA
GCGCCCGCCGAGGCGGGTGTGCCGCCACTTCCTGTGCCAAGAGGTACGAT
ACCGCGCAGCTAATTTCTATCGTCGTGAGCTCAACCAAGAGAGCGGGCGA
TGGCCCTTCTCTATAGCGGGCGCATTGACACCGTTATCGCAATGTGGTTG
TGTCGTTGGCGCGTTGCTTTTTCCAAAGTTGAAGATGAGTCCACGTGTGG
GCAGGCAACAACTGACAGTTGTGTATGTTGTGCTCCTCTACACATCCCCC
TGCTGCGGCTGTATCCTTTGCGCCCCTCTGTAAATAAAAACGATGAAGCC
TACACGTGATAATTCATGACCGTGTTCGTGCGGATCGCTGCTGTTGTGGC
TTCCGGACGGACCAAACACGTTCGGCTGTCTCGAAGAAAACAACCAAGCA
GTGGTATGATTTCCCCGCAGACCGCCGTTCGTCAGATCCTTCCTTACCGT
GTTGCGCGTGGATTCTCACTCGTGGGTCTCCCTCCGAAGGCACCGGTCCA
AACAAGTGTCGTCACTTGATTTAGAACCTGATGAACGTAACCGTTCGTTA
CTTGTGCTGTGTCGAAGAGTTCCTTCAAGGCGGTGTTGGCAACCGATCCT
GCTGATTCTGGACCCGTACCAAAAAATTGTACTTCGAGAAAACACACGCT
TCACATTCCAACACTTCGGGTTAGATCAACCGAACGCGCCCTATGTATTG
TAGATGAGATCGCCTGGGAGTTAAGTTCCAGCTTCATGCAATAGGGTTCA
ACATTGTCATCTTGATCGTGAGAGTACGTGCCCGGTTGAGGTAAGACGTC
CTACACTAGAGTCTACCGTGGTGTTCGCCTGTGGGAATTTTAATTTTTAG
TATCATTAGCCAACCTCCCTGAGAGGTAACGAGGTTCTTGGGGGGTACAG
GGTTCTGTACGCAAGATACAGCAAGATCTCGATCGCGGGCACGATTTTCT
CCTCCTCCTCGCGACCCGCCCCAAAACAACTTTCGCATGTCACGCGCTCT
TTCCACCCCAAACACAAGTCGCGTTGCAACCGCGTTCTGCTGTATCCCTT
AGACGTCATGGTCCCCGGCAGGATGAGTCACACCAGTACCAACCTTTTTG
TACAACATTTTCATCTTGCGCCACCCCGGTGTGCTTTCGCTCTGCTCTCA
TCGCTCACGCGGGAGCCTTGTTTCTACATCCTCGTTTCTACATACTACGG
CTGCATGCTGCTTTCACTTGTTTTTTTCACCAGTTGAAGAGAGTTGGCTG
CGAAAAGGGAAATGGACAACAGTTGGGCACCACCCCCTCTCAGACAAAAA
GTGGGACTCGATCATGAGATTCGCTGAGACAACTCATGGAAGAAGGCCGA
ACCACTCACAATCTCGTTCCTCTTGTTTTCCACAAAGCGTCGGTTTTCGG
CTTGTCTCCTTTTAAATTTAACCACCTCCACACAAACTCTCAAACCAAGA
CGGAAATTTTCAGGAATTTCCACCTAGTGTATTTACGTTGGAGAAAAGTC
AGCGGCGACAGGTGCCCAAGATTGATCTTCGCAGCCTAAACCTGACGTGA
TTTCTCAGTGCAGGGCCTAACGCAATCCATGGTACGACGGTACGGTCGGA
TCTGCTATGCTGGGTTATCCTGTTGTAGGCTGCGCCTGAGACCCCGGCCC
GCAAAATCCGGGCCCAAGCCAGTCATCTTTCACGCCGTCTCAAACCTGAT
CTCCTTGCCATGCGGGTCTATGGCGGGTTACTCGCACGCACTCCCGAAGA
ATGTGTTGGCTGCCTTGGACGACCCGTAGTTCTGGAGATGCAGCAGTAGA
AGGATACATTATTGTTACGATGTTGTGTTGCTCATGTGCCGATTCCAGTC
CGCTCCAGCGGCAACCCCTGCTGTCTACCAGCCGCTCTATTCCGGAACGC
GTGTCGCCGGTGCTGAGGGATGGAAGCGATGCTTCGAGTAGCTGCAACAG
ATGCGCTCGACCACTGCAGACCGTTTGGTCGGGCTGCCCACCCACCCACC
CTTCACTTCCTCTGCAAAGAAACCAATGTCCGTGTGTGAGAAGGTGTACT
ATACACGCAAAACAAGGTACACAATGAACCGAGCGAAGGGAATGAAGGCC
CCAACTCTTCACGTGAACCTAGAACACTTTCTGACAATGTCCCTGATGAA
TTTGTCGCGAACAAAAGGAATGCCCTTTCCGTTTATGATCGTCCCTTGTT
GGCCCGCAGTGTGCACCAACCATCATTCCGCGCAAGTGTCCCGTGTGCCG
GAGGGACTTCGTATCGACCTTGGACGTGCCCGATCCGATTGCGAACCCGG
TCCGATGGTTCCATGTCGTCGACCGTGACCAGGTGTGTGCGTGTGTGTGC
TTTTTGTTCGTTTCGACCGCGCTATCCTCCTTGCCAATGAAAAGACGTGA
GTCTCATTTCGATTGAAAAATGAGAGTGCTTCTACAGAGGCAATGATCTG
GGCCCCTGTGTGTGTGTTCATCTTTAAGTTGTTGTACCGTGTGTCTCTTC
CTAGCATCGACCGCACCGACAGGCTGGCCAACCAAATGTGAAGACGTCAG
GTTCAGTGCTGCGAAAAACGGAAAACGTCTCAAATAGTCAGGATTTTCAG
GGGGGTAATTAGCATTGACTGCGCCATCCGGCGTGACCTTGACGGCTCAC
AGGCAAGTAAAAGGTGTGTGCGTGTACATACCATACATTATGCATTCCAG
GGAAAATATAGATTTGTGTGTGCAACCCGGAACCAGCGCGAACGTGTACA
TGTGTCATTCCCTTTCAACCCACGAGGCATTTTTTTTTTTTTTCAGGAGG
TGCAAGGTATCATACTATCACAGGCTACACACGGCAGACACAAAAGCATC
CTCGCGGACCGCAAACGCACTGCAGGCATGGGGCGGGGAGTCCGTAGACG
AAGCACGTTAACTGGACATGGGTATCGTTGTCTCTCTAAACCCGTATGCC
GAGAATGCTGTTCTCGCTAAGAGATTGCGCGACGGTGGGGTTCCTCCGTC
AAACGTCTGACTCCCCAACACCCCGCCGAACGTAGTGTGATATCCTCCCA
GTGGCTTTTGTCCCCTTAAGAGTCCCCCTCTTCTGCCTCTTGTCGTCTAC
CTGTACAAAGGTAAACTCCTCTGAAAACTCGCTCCCGCGTCTGTTTCGCT
TACTGCCCGTCTTCGTTCCTAAAACCACCCACGACGGGAACAGAACGGCT
CGATCGAGAAGTCTGAGCTGGTGGACGCCTTGAAAGGTATGTTCCCAGTC
GAGCCAGGAGCTCTGGAGGAAATTATCGAGATGAACTGGAGGAGTTGGGA
CACAGACAACAACGGGACGCTAGGTGAGCGGAACGTGGGTTTTGTTGGAG
CTGTGCTCGCGGGCGCGGTGCTTTTTTTATAGGTTAGCACGTGGAAGGGG
TTGTTTCAATAGTCGTCGTGGGGTTGTCGTGCTTTGACACGTTGACGAAG
GTGAGCGATGTGACCTCGTCGATAGCCAGAAGCGCGACTGTTCTTCCAGT
TCATTCAACTGTAAAGCCGCTTGTTCTTTCGATGCATATCCGGGGTTGCA
GGCGAACCGACCAACACTTTTCATCGTGAATGATGCAGCAACAAATTGAT
CGAAGGCGTCTGCGACATGTCGCGTGCACTGGAAGGAAAAAGTATCCGAA
TATTTCTGCAAGCACCCGCGAGATCGCTAGCCACTCTTGTGGAGTGAGAC
CATCGCTGGTATGCGCGAGCGCGCACGCCGTTTGAGTGTCCTTGTCGTAT
TTTCGTTCTTCCCTTGTGTTTTTCAGCTGTCTTACTTCGTCATCGGCGAT
GTTTTTGTTTCACAAGTAGTTGAGGCATGGGCCGACTGGTTTATCCTTGC
TCTGTTTGGCCACGGGGGGGTCTAGAGGCTCAGTTGGTGTGAGAGATGGC
CATGTGGTGATCGACTTGCGACCCATTTCTAGAACGACCACCGTTCTCGA
CACCCGCCACGTTTGGCCTTTCGTTTTGTTACGCGCTTTACCGTGCCTCA
ACACGTAGCTGTTTCCCGTCGCTTGTTGTCGTTCTCTCGGCTTCCGGCTT
CAATGTACAGTATCTCCTCTTGAAACGGTTTTTACTCATGCGGAAATCCT
CCCTCCCCCCGCCCCCCCCTTGGCCGCCTTCGTCGCACCCGGAACCAAAA
TAATTCCAGACACGGCCGAGTTTCGGAACAGGCTAGCTCCGTTCCTGGCG
CAATCCATCGGCAACATGAGACAGAGGATCACTCCCCAGCTACCCGATCT
CAAGGATCAACCGGCGGAGTGGTTCAAGTACTGGGATGAGGTCAGGCCAA
TCCCTTGTTCAGTGTTTCGTTCTTTACGTATCTTCTCGATGCCAAAACGC
CGATGGGCAGTGGCGTCGATAGCGACTCCCGCGGAGGGAGAGATGTGGAT
GATTGTTGTTTGCGGGCAGCCGAGAGGACAGTTTGGTGTACGGCTGCAGA
AGTGTTTATCGAGGTGGAGGTGTCGCAGGCAGGTGTGCGCGCTCCTCGTC
AAGGCAAGCAGTGTTGTAGCAACCCAACGTACTGTCCCACCCCCCTTGTC
CTCCCGTTGCGCGGTTGTTTCCGTCGCTGGTGCCATCGTGGATGCCGTTT
TGATGCTGTTGCTGTTGCGTCAGCCGAAGCCGTTGCTGCTGTCGTTTCTT
GTTGATTGCTGGCTGTCTCTGTTCCGATATGTTGTCGTGGCGGGTGTTGG
TTTTTGCTGTACTTGTGTTCTCGAACCCCCGTTTTCTTTTGTTCAGCTCA
ACAGTAACCCTAAGTTTTGGTCCTACACTTGTCGTTTGTCTTTTTGTTTG
CCAAAGGACGAATCGGGATCGTTGGAGCGACCCGAGATCGTGCGGGCGCT
CATCAAGACCATACCGGAGTTCACGGGACGCGACGAGGGTTGGCTGGGGG
GAACGTTTGCAGCCATCTGGTCGATCATCGACCCTGATCAGGACGGT

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1569:11046..16342-

>mRNA_Ecto-sp13_S_contig1569.4204.1 ID=mRNA_Ecto-sp13_S_contig1569.4204.1|Name=mRNA_Ecto-sp13_S_contig1569.4204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1569:11046..16342- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATAGGAGGCACTCTTCTTGTCTTTGCTTTACCTGCCACAGCCAATC
TCCTCACCTCGCTGCTAGGCAGAGAAACACTCACAGTAATCAGTGGATGA
GCACGATGGACCTGGAGATCGCCGCCGGGTACGGCGAGTGTAGCGTCTGC
TTCGAACATCTCTGCGCCAAGGGAGCGAGCGTGATGGTAGACGGCAGCGG
GCAGCAGGCTGGCTTCTTGCGCGCCGAGCGCCCGCCGAGGCGGGTGTGCC
GCCACTTCCTGTGCCAAGAGTGTGCACCAACCATCATTCCGCGCAAGTGT
CCCGTGTGCCGGAGGGACTTCGTATCGACCTTGGACGTGCCCGATCCGAT
TGCGAACCCGGTCCGATGGTTCCATGTCGTCGACCGTGACCAGAACGGCT
CGATCGAGAAGTCTGAGCTGGTGGACGCCTTGAAAGGTATGTTCCCAGTC
GAGCCAGGAGCTCTGGAGGAAATTATCGAGATGAACTGGAGGAGTTGGGA
CACAGACAACAACGGGACGCTAGACACGGCCGAGTTTCGGAACAGGCTAG
CTCCGTTCCTGGCGCAATCCATCGGCAACATGAGACAGAGGATCACTCCC
CAGCTACCCGATCTCAAGGATCAACCGGCGGAGTGGTTCAAGTACTGGGA
TGAGGACGAATCGGGATCGTTGGAGCGACCCGAGATCGTGCGGGCGCTCA
TCAAGACCATACCGGAGTTCACGGGACGCGACGAGGGTTGGCTGGGGGGA
ACGTTTGCAGCCATCTGGTCGATCATCGACCCTGATCAGGACGGT