prot_Ecto-sp13_S_contig1569.4203.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1569.4203.1
Unique Nameprot_Ecto-sp13_S_contig1569.4203.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length414
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1569.4203.1 vs. uniprot
Match: A0A6H5L7D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D3_9PHAE)

HSP 1 Score: 660 bits (1704), Expect = 1.130e-236
Identity = 369/433 (85.22%), Postives = 381/433 (87.99%), Query Frame = 0 
Query:    1 MLRCAASSPAAERVGGAARRCGTKFASHGRLLHVKQRHHRRTSGLTALLLDRDAAHVAAIARAAPVSNGFCTAKLRLPHAQGVTGCGGRSSAPVLFNRKTTAAGPMLIHRPPPWNAATTGARRQLSTPGRGGRALPERVFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLVTRLAQKMAERGGPHGXXXXXXXXXXXXXXX--------------------APWMQRAATEGALSSLFAQMLGGGVRGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSDVEISTVDSVGGNSWNSGGGAGDRQGGKPSRVTKAKLRFSGRRAGAGWAEVEVTECGGREEEGMEFDRIFVTLDNGRTFDLTSDIFSGDDRVGEGASGVRSRRTVKGRSTSPQGSKNKARREARGGQPVEAEFRDK 413
            MLRCAA SPAAERV GAARRCGTK ASHGRL++V+QRHHRR+SGLTALLLDRDAAHVAA+AR  PVSNGFCTAK RLPHAQGVTGCGGRSSAPVLFNR TTAA PM I  P PWNA T GARRQLST GRGGR LPERVFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNL  RLAQKMAERGGPHG     XXXXXXXXXX                    APWMQRA TEGA+SSLFA+MLGGG+RGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSD+EISTVDSVGG+SWNSGGGAGDRQGG PSRVT AKLRFSGRRAGAGWAEVEVTE GGREEEG+EFDRIFVTLDNGRTFDLTSD FSGDDRVGEGASGVRSRRTV GRSTSPQGSKN AR EA GGQP+EAEFRDK
Sbjct:    1 MLRCAAFSPAAERVRGAARRCGTKVASHGRLINVQQRHHRRSSGLTALLLDRDAAHVAAVARVTPVSNGFCTAKRRLPHAQGVTGCGGRSSAPVLFNRTTTAAHPMSIQGPRPWNATTAGARRQLSTSGRGGRPLPERVFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLAARLAQKMAERGGPHGGGGGLXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXAPWMQRAPTEGAVSSLFARMLGGGLRGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSDIEISTVDSVGGSSWNSGGGAGDRQGGGPSRVTNAKLRFSGRRAGAGWAEVEVTEWGGREEEGIEFDRIFVTLDNGRTFDLTSDSFSGDDRVGEGASGVRSRRTVSGRSTSPQGSKNNARGEAGGGQPIEAEFRDK 433
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BLAST of mRNA_Ecto-sp13_S_contig1569.4203.1 vs. uniprot
Match: D7FYD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD6_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.320e-163
Identity = 270/311 (86.82%), Postives = 278/311 (89.39%), Query Frame = 0 
Query:  106 MLIHRPPPWNAATTGARRQLSTPGRGGRALPERVFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLVTRLAQKMAERGGPHGXXXXXXXXXXXXXXXA---PWMQRAATEGALSSLFAQMLGGGVRGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSDVEISTVDSVGGNSWNSGGGAGDRQGGKPSRVTKAKLRFSGRRAGAGWAEVEVTECGGREEEGMEFDRIFVTLDNGRTFDLTSDIFSGDDRVGEGASGVRSRRTVKGRSTSPQGSKNKARREARGGQPVEAEFRDK 413
            M I    P +A T GARRQLST GRGGR LPER+FAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLV RLAQKMAERGG HGXXXXXXXXXX         P MQR+ TEGALSSLFA+MLGGG+RGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSD+EISTV SVGGNSWNSGGG GDR+GG+PSRV KAKLRFSGRRAGAGWAEVEVTE  GREEE MEFDRIFVTLDNGRTFDLTSD FSGDDRVGEGASGVRSRRTVKGRSTSPQGSK KAR EA GGQPVEAEFRDK
Sbjct:    1 MSIPSTSPCSATTAGARRQLSTAGRGGRRLPERIFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLVARLAQKMAERGGSHGXXXXXXXXXXPMMGGGGGTPRMQRSPTEGALSSLFARMLGGGIRGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSDIEISTVASVGGNSWNSGGGGGDRRGGEPSRVVKAKLRFSGRRAGAGWAEVEVTEWAGREEEEMEFDRIFVTLDNGRTFDLTSDSFSGDDRVGEGASGVRSRRTVKGRSTSPQGSKKKARGEAGGGQPVEAEFRDK 311
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1569.4203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7D3_9PHAE1.130e-23685.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD6_ECTSI1.320e-16386.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 174..413
NoneNo IPR availableTMHMMTMhelixcoord: 139..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1569contigEcto-sp13_S_contig1569:453..4351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1569.4203.1mRNA_Ecto-sp13_S_contig1569.4203.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1569 453..4351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1569.4203.1 ID=prot_Ecto-sp13_S_contig1569.4203.1|Name=mRNA_Ecto-sp13_S_contig1569.4203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=414bp
MLRCAASSPAAERVGGAARRCGTKFASHGRLLHVKQRHHRRTSGLTALLL
DRDAAHVAAIARAAPVSNGFCTAKLRLPHAQGVTGCGGRSSAPVLFNRKT
TAAGPMLIHRPPPWNAATTGARRQLSTPGRGGRALPERVFAGLVVVVLAA
WGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLVTRLAQKMAERGGP
HGGGGGLGGPMMGGGGGAPWMQRAATEGALSSLFAQMLGGGVRGMQLVGV
LRSEVEKRALRHPGLSSALGGGIENFSDVEISTVDSVGGNSWNSGGGAGD
RQGGKPSRVTKAKLRFSGRRAGAGWAEVEVTECGGREEEGMEFDRIFVTL
DNGRTFDLTSDIFSGDDRVGEGASGVRSRRTVKGRSTSPQGSKNKARREA
RGGQPVEAEFRDK*
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