prot_Ecto-sp13_S_contig15656.4188.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15656.4188.1
Unique Nameprot_Ecto-sp13_S_contig15656.4188.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15656.4188.1 vs. uniprot
Match: D7G973_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G973_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.110e-27
Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 0 
Query:   44 AASVEEREGGRPEHVEGAVCQRKLDACSTKRSPRAPLPLRHHRLDGKTKRPG---CRRHMISTEVGR 107
            AA VEE+EGGRPEHVEGAVCQRKLDACSTK SPRAPLPLRHHRLDGK K      CRR MISTE GR
Sbjct:   99 AACVEEKEGGRPEHVEGAVCQRKLDACSTKGSPRAPLPLRHHRLDGKEKAGASCMCRRDMISTEAGR 165
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BLAST of mRNA_Ecto-sp13_S_contig15656.4188.1 vs. uniprot
Match: A0A6H5J7H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.670e-14
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0 
Query:   40 PLPPAASVEEREGGRPEHVEGAVCQRKLDACSTKRSPRAPLPLRHHRLDGK 90
            P   AA ++ REGGRPE+VEG +CQRKL AC+ K +PRAPLPL HHRL+GK
Sbjct:   68 PYTTAAYMDAREGGRPEYVEGTLCQRKLVACANKGNPRAPLPLHHHRLEGK 118
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15656.4188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G973_ECTSI3.110e-2782.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7H2_9PHAE5.670e-1466.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15656contigEcto-sp13_S_contig15656:2161..2743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15656.4188.1mRNA_Ecto-sp13_S_contig15656.4188.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15656 1901..3881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15656.4188.1 ID=prot_Ecto-sp13_S_contig15656.4188.1|Name=mRNA_Ecto-sp13_S_contig15656.4188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
MHVVRAVAPCPVRGVDSDAGAPLRGKPALRQPRKGFARSPLPPAASVEER
EGGRPEHVEGAVCQRKLDACSTKRSPRAPLPLRHHRLDGKTKRPGCRRHM
ISTEVGR*
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