mRNA_Ecto-sp13_S_contig15655.4187.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 171 bits (432), Expect = 2.690e-47 Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 1 VVTEALAGTRGRGDTTTEDERLGKELIDSEK---------------DMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATLAPGTDNDCSDGGVRRDDA 291
VVTEALAGTRGRGDTTTEDERLG+EL+DSEK D+RENAITADYVSAALRKAGAVKL+CSEPSLKRLTHVQHICRRITATLAPGTDNDCS+GG RDDA
Sbjct: 612 VVTEALAGTRGRGDTTTEDERLGEELMDSEKFRGGGGGLRVVLALVDVRENAITADYVSAALRKAGAVKLNCSEPSLKRLTHVQHICRRITATLAPGTDNDCSEGGFCRDDA 723
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.150e-16 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 1
Query: 97 MRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICR 219
MRENAITADYVSAALRKAGAV LDCSEPSLKRLTHVQHICR
Sbjct: 1 MRENAITADYVSAALRKAGAVTLDCSEPSLKRLTHVQHICR 41
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A2A5E5E4_9BACT (Isochorismate synthase MenF n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5E5E4_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 1.350e-13 Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 10 EALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATLAPGTDN 255
EALAGTR RG T+ ED+ LG+EL+ SEKD+RE+ D ++A R+ + S P L +L +QH+ RIT L GTD+
Sbjct: 281 EALAGTRPRGTTSEEDDSLGRELLQSEKDLREHRFVVDRIAAQFREQCSSCHHTSHPELLKLRRIQHLLTRITGDLNAGTDD 362
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A2R6HNT3_9EURY (Isochorismate synthase n=1 Tax=Halobacteriales archaeon QS_4_62_28 TaxID=1919173 RepID=A0A2R6HNT3_9EURY) HSP 1 Score: 73.2 bits (178), Expect = 4.680e-13 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 VVTEALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATLAPGT 249
V TEALAGT RG+T TED L E++ EK EN+I AD ++ ALR A + ++P++KR+T++QH+ R ITAT+ GT
Sbjct: 266 VETEALAGTTDRGETITEDTNLADEMLGDEKYQVENSIVADTIADALRPV-AEDVTVADPTIKRITNLQHLHRPITATVDDGT 347
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A5Q0UPW0_9EURY (Menaquinone-specific isochorismate synthase n=7 Tax=Halomicrobium TaxID=203135 RepID=A0A5Q0UPW0_9EURY) HSP 1 Score: 66.6 bits (161), Expect = 9.510e-11 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 VVTEALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATL 237
V TEALAGT RG+T ED L ++ EK EN I AD ++ ALR A + +EPS+KR+T++QH+ R ITAT+
Sbjct: 267 VQTEALAGTTDRGETAAEDTDLADAMLGDEKYQVENRIVADTIADALRPV-ADDVTVAEPSIKRITNLQHLHRPITATV 344
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.930e-10 Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 1 VVTEALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRK-AGAVKLDCSEPSLKRLTHVQHICRRITATL 237
+ TEALAGTR RG T EDE L EL+ S KD EN +TA+ + ALR +++ + RL HVQHIC +IT L
Sbjct: 324 ISTEALAGTRPRGQTPEEDEALAAELMASHKDRFENRVTAESIEDALRPLVQGGRVERFPAFVLRLQHVQHICHKITGRL 403
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A524QTE3_9BACT (Isochorismate synthase MenF n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A524QTE3_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.160e-9 Identity = 34/78 (43.59%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 10 EALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSE--PSLKRLTHVQHICRRITATL 237
+A+AGTR RGD+ ED+R+G+EL+ SEKD RE+ D ++ AL V + ++ P+L +L VQH+ RI TL
Sbjct: 285 DAIAGTRPRGDSEHEDQRMGEELLSSEKDRREHRFVVDSITEALSAKCDVTIHPADDPPTLLKLERVQHLYTRIECTL 362
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: UPI001912A790 (isochorismate synthase n=1 Tax=Thiorhodovibrio winogradskyi TaxID=77007 RepID=UPI001912A790) HSP 1 Score: 63.5 bits (153), Expect = 1.160e-9 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 10 EALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATLAPGTD 252
+A+AGT GR D +D LGKEL+ SEK++RE+ D +S AL + ++P L RL + QH+ ITA + P TD
Sbjct: 286 DAIAGTIGRSDCADQDLALGKELLRSEKNLREHGFVVDAISQALEPSCRAIHVPAQPDLMRLRNAQHLWSPITAEIDPDTD 366
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A6P0U8D1_9CYAN (Isochorismate synthase (Fragment) n=1 Tax=Okeania sp. SIO3C4 TaxID=2607786 RepID=A0A6P0U8D1_9CYAN) HSP 1 Score: 62.4 bits (150), Expect = 2.270e-9 Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 VVTEALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATLA 240
++T+ALAG+ RG T+T+D +L K L+ SEKD+RE+ D++ L+ G S+P L +L+++QH+ ITA ++
Sbjct: 119 LITDALAGSAPRGKTSTQDIKLAKNLLSSEKDLREHQFVIDFIIKHLQDLGLNPHYPSQPHLLQLSNIQHLWTPITAEIS 198
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Match: A0A7J9ZXE5_9ACTN (Isochorismate synthase n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A7J9ZXE5_9ACTN) HSP 1 Score: 61.6 bits (148), Expect = 5.410e-9 Identity = 37/83 (44.58%), Postives = 45/83 (54.22%), Query Frame = 1
Query: 1 VVTEALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAGAVKLDCSEPSLKRLTHVQHICRRITATLAPGT 249
V + LAG+R RG T EDE+LG EL+ S KD E+ AD V AL A EP L L +VQH+ + LAPGT
Sbjct: 233 VTSLVLAGSRARGATCAEDEKLGGELLGSAKDQEEHRYAADSVRDALAPLCASIDVQDEPELLALANVQHLATPVRGELAPGT 315 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15655.4187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15655.4187.1 >prot_Ecto-sp13_S_contig15655.4187.1 ID=prot_Ecto-sp13_S_contig15655.4187.1|Name=mRNA_Ecto-sp13_S_contig15655.4187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp VVTEALAGTRGRGDTTTEDERLGKELIDSEKDMRENAITADYVSAALRKAback to top mRNA from alignment at Ecto-sp13_S_contig15655:2423..3621- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15655.4187.1 ID=mRNA_Ecto-sp13_S_contig15655.4187.1|Name=mRNA_Ecto-sp13_S_contig15655.4187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1199bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15655:2423..3621- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15655:2423..3621- >mRNA_Ecto-sp13_S_contig15655.4187.1 ID=mRNA_Ecto-sp13_S_contig15655.4187.1|Name=mRNA_Ecto-sp13_S_contig15655.4187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=291bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15655:2423..3621- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |