mRNA_Ecto-sp13_S_contig15647.4183.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE) HSP 1 Score: 448 bits (1152), Expect = 3.410e-151 Identity = 325/390 (83.33%), Postives = 329/390 (84.36%), Query Frame = 1
Query: 1 KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPS-PPAAXXXXXXXXXXXXXXXXXKLESSTSNVGGSGGISGAVLSPESSRXXXXXXXXXXXXXXXXXVGGRRAWVRGRRQAFAQAPNGVGEDVSGWLNDDNEVEGDGLSDLQGGKKLKAGAGQTSTHRHHHPIMPSTVSSESXXXXXXXXXXXXXXXXXXXXX------MPRRKSFTEPYSKDDPSRGTRMSRARRKSAPGKPPADVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXES-LLLLSPAKGINCRQTPSNAACSTPGDDSAAAASPGSCTGVERCVTRSSGGGGTSCRAR 1146
KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPS PPAAXXXXXXXXXXXXXXXXX ISG+VLSPESSR VGGRRAWVRGRRQAFAQAPNGVGEDVSGWL+DDNEVEGDGLSDLQGGKKLKAGAGQTS HR XXXXXXXXXXXXXXXXXXXXX MPRRKSFTEPYSKD+PSRG RMSRARRKSAPGKPPADVLA XXXXXXXXXXXXXXXXXXXXXXXXX LLLLSPAKGINCRQT SNAACSTPGDD+AAA SPGSCTGVERCVTRSSGGGGTSCRAR
Sbjct: 193 KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPSSPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ISGSVLSPESSRKKEAGRGATTAASAPTTVGGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNEVEGDGLSDLQGGKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKDEPSRGMRMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLSPAKGINCRQTSSNAACSTPGDDAAAAPSPGSCTGVERCVTRSSGGGGTSCRAR 579
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: D7G3T8_ECTSI (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T8_ECTSI) HSP 1 Score: 155 bits (392), Expect = 3.570e-41 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 1
Query: 1 KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQ 231
KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGL ADEAMERCQHVHDVRRIPISVGSPQTE+QRQQ
Sbjct: 193 KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 269
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A7S3YH03_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH03_HETAK) HSP 1 Score: 125 bits (315), Expect = 3.210e-30 Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 13 LAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRV 255
LA L LA+GEVMYLHCWGGHGRTGTV+C++LHLMY AD+A ERCQ++HD+RRIP++VGSPQT+ QR+QVRRVI ++
Sbjct: 148 LAHHLVSLLAKGEVMYLHCWGGHGRTGTVICLLLHLMYNYTADQAFERCQYLHDLRRIPVAVGSPQTQGQREQVRRVIEKL 228
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A6C0F341_9ZZZZ (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F341_9ZZZZ) HSP 1 Score: 112 bits (280), Expect = 4.680e-25 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 1
Query: 4 VLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVI 246
V LA L + GEV+YLHCWGGHGRTG +VC+MLHLMYGL A+EA+ERCQ +HD+R++PI V SPQT Q+ QVRR+I
Sbjct: 173 VFSLAKDLVKAIHDGEVVYLHCWGGHGRTGIMVCLMLHLMYGLTANEALERCQFLHDIRKMPIIVSSPQTFRQKDQVRRII 253
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A7S3M379_9STRA (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M379_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.590e-25 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 1 KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVI 246
KVL LA +L ++ GEV+YLHCWGGHGRTGTVVCIML+L+YGL +A + CQ VHD+R P+ VGSPQT++QRQQV RVI
Sbjct: 34 KVLALAQKLTKDISEGEVIYLHCWGGHGRTGTVVCIMLYLLYGLNPKQAFDYCQAVHDLRTCPVEVGSPQTQTQRQQVVRVI 115
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A7S2WJS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJS5_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.120e-24 Identity = 50/86 (58.14%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 4 VLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIA 261
V +LA L R+ R EV+Y+HCWGGHGRTG++VCI+L+++Y LG++EA++ CQ VHD+RRIP+ V SPQ +QR QVRR++ R IA
Sbjct: 57 VYKLALDLTRRMQRNEVIYMHCWGGHGRTGSLVCILLNIIYKLGSEEAIQYCQFVHDLRRIPMDVPSPQKPAQRNQVRRIV-RAIA 141
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: F0Y9Z0_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Z0_AURAN) HSP 1 Score: 107 bits (268), Expect = 1.440e-22 Identity = 54/90 (60.00%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 4 VLQLAAQLAGRL-ARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRR 270
V A LA R+ EV+YLHCWGGHGR GTVVC++LH +Y A AM RCQ VHD+RR+PI VGSPQT++QR QV RVI R I R+
Sbjct: 89 VTDFAVALARRIKTTNEVVYLHCWGGHGRAGTVVCLLLHFLYDQDAASAMMRCQFVHDLRRVPIVVGSPQTQTQRDQVSRVIARSIVSRK 178
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A5A8C9N1_CAFRO (TYR_PHOSPHATASE_2 domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9N1_CAFRO) HSP 1 Score: 105 bits (262), Expect = 1.850e-22 Identity = 57/97 (58.76%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 4 VLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGR--VIAHRRSLVPSP 288
VL+LA L RLA GE +Y+HCWGGHGRTGTVV IML LMYGL A M QHVHD+R P+ VG+PQT QR+QV R++ A R SL P P
Sbjct: 167 VLELAHDLVNRLASGENLYVHCWGGHGRTGTVVSIMLGLMYGLPARNCMAYLQHVHDLRICPMDVGTPQTSQQRRQVIRILSARPPAAPRASLAPDP 263
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A8J2T0D3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0D3_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.170e-21 Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 4 VLQLAAQLAGRL-ARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIA 261
V + LA RL EV+YLHCWGGHGR GT+ C++LH +YGL A +AM RCQ VHD+RR+PI VGSPQT++QR QV RV+ +A
Sbjct: 154 VAAFSRSLADRLRCTDEVIYLHCWGGHGRAGTITCLLLHWLYGLNALDAMARCQFVHDLRRVPIVVGSPQTQTQRDQVCRVVASSLA 240
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Match: A0A7S3NIH7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.530e-19 Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 28 AGRLAR-----GEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSL 276
A RLAR +++YLHCWGGHGR GT+ C++ HL+YGL AM RCQ VHD R+IPI+VGSPQT +Q QV R+I R ++SL
Sbjct: 202 ARRLARRIRDTDQIIYLHCWGGHGRAGTITCLLFHLLYGLDDKTAMRRCQLVHDCRKIPINVGSPQTRTQCDQVSRIIHRWTKKQQSL 289 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15647.4183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15647.4183.1 >prot_Ecto-sp13_S_contig15647.4183.1 ID=prot_Ecto-sp13_S_contig15647.4183.1|Name=mRNA_Ecto-sp13_S_contig15647.4183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=383bp KVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMback to top mRNA from alignment at Ecto-sp13_S_contig15647:2573..3721- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15647.4183.1 ID=mRNA_Ecto-sp13_S_contig15647.4183.1|Name=mRNA_Ecto-sp13_S_contig15647.4183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1149bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15647:2573..3721- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15647:2573..3721- >mRNA_Ecto-sp13_S_contig15647.4183.1 ID=mRNA_Ecto-sp13_S_contig15647.4183.1|Name=mRNA_Ecto-sp13_S_contig15647.4183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1149bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15647:2573..3721- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |