prot_Ecto-sp13_S_contig15616.4173.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15616.4173.1
Unique Nameprot_Ecto-sp13_S_contig15616.4173.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length162
Homology
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 3.170e-87
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAA 162
            QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDT+IGIESRSKVEMRLRQLEGGARLLEAA
Sbjct:  263 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAA 411          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.930e-73
Identity = 121/148 (81.76%), Postives = 137/148 (92.57%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEA 161
            QVVALSEYR+QL +YL++RM AIAPNLTI+VGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APKNKGK+SRVLAAK ALA+RVDA+ + TDT++G+ESR+KVE R+RQLEGG RL  A
Sbjct:  263 QVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKVSRVLAAKTALAVRVDAMGETTDTTLGLESRAKVEARIRQLEGGTRLATA 410          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A383VYQ8_TETOB (Nop domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYQ8_TETOB)

HSP 1 Score: 228 bits (580), Expect = 1.520e-72
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 154
            QV+ LSEYR QL +YL+SRM A+APNLT++VGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ+ PK+KGKISRVLAAKCALAIRVDAL D TD ++G E+R+KVE RLRQLEG
Sbjct:   19 QVIELSEYRGQLFDYLKSRMAAVAPNLTVLVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSQPKHKGKISRVLAAKCALAIRVDALGDTTDAAVGTEARAKVEARLRQLEG 159          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A250WQJ8_9CHLO (Nop domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQJ8_9CHLO)

HSP 1 Score: 233 bits (594), Expect = 1.550e-71
Identity = 123/150 (82.00%), Postives = 135/150 (90.00%), Query Frame = 0
Query:   13 TQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAA 162
            TQV+ LSEYR QL EYL+SRM AIAPNLT++VGELVGARLIAHAGSL+NLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ++PK KGKISRVLAAKCAL+IRVDAL D  D SIGIESR+KVE R+RQLEG   + E A
Sbjct:  257 TQVIELSEYRAQLFEYLKSRMAAIAPNLTVLVGELVGARLIAHAGSLVNLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSSPKFKGKISRVLAAKCALSIRVDALGDSADASIGIESRAKVEARMRQLEGKVLVSEGA 406          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A7S0CM09_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CM09_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.870e-71
Identity = 122/146 (83.56%), Postives = 136/146 (93.15%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADET----DTSIGIESRSKVEMRLRQLEGG 155
            QV++++EYR QL EYL++RM AIAPNLTI+VGELVGARLI+HAGSL+NLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQA PKNKGK+SRVLAAKCALAIRVDAL+DET    DT++G ESR+KVE RLRQLEGG
Sbjct:  251 QVLSMTEYRSQLFEYLKNRMNAIAPNLTILVGELVGARLISHAGSLMNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKNKGKVSRVLAAKCALAIRVDALSDETTGIPDTTLGYESRAKVEARLRQLEGG 396          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A7S2UY01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY01_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.510e-71
Identity = 118/144 (81.94%), Postives = 133/144 (92.36%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGAR 157
            QVV+LSEYR+QL +YL++RMQAIAPNLTI+VGELVGARL+AHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ + KNKGKISRVLAAKCAL IR+DAL + +DTS+G E R KVEMR+R LEGGAR
Sbjct:  208 QVVSLSEYRVQLYDYLKNRMQAIAPNLTILVGELVGARLLAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTSNKNKGKISRVLAAKCALGIRMDALGEVSDTSVGFEGRQKVEMRIRMLEGGAR 351          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: D8TJ80_VOLCA (Nop domain-containing protein n=2 Tax=Volvocaceae TaxID=3065 RepID=D8TJ80_VOLCA)

HSP 1 Score: 231 bits (590), Expect = 5.440e-71
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 154
            QV+ALSEYR QL EYLR+RM AIAPNLT++VGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ+APK KGKISRVLAAKCALAIRVDAL D  D ++G+E+R KVE RLRQLEG
Sbjct:  259 QVIALSEYRGQLFEYLRNRMSAIAPNLTVLVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSAPKYKGKISRVLAAKCALAIRVDALGDTNDATVGVEARQKVEARLRQLEG 399          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A836C6H8_9CHLO (Nop domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C6H8_9CHLO)

HSP 1 Score: 231 bits (589), Expect = 7.320e-71
Identity = 120/141 (85.11%), Postives = 132/141 (93.62%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 154
            QV+ALSEYR QL EYLR+RM AIAPNLT++VGELVGARLIAH+GSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQAAPK KGKISRVLAAKC+LAIRVDAL D +D ++G+E+R KVE RLRQLEG
Sbjct:  259 QVIALSEYRGQLFEYLRNRMNAIAPNLTVLVGELVGARLIAHSGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQAAPKYKGKISRVLAAKCSLAIRVDALGDSSDATVGVEARQKVEARLRQLEG 399          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: H3G5X2_PHYRM (Nop domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5X2_PHYRM)

HSP 1 Score: 222 bits (565), Expect = 1.040e-70
Identity = 114/142 (80.28%), Postives = 130/142 (91.55%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGG 155
            QV++L+EYR QL +YL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK ALA+RVDAL D T+ +IG ++R+KVE R+RQLE G
Sbjct:    8 QVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVRQLENG 149          
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A5B8MT56_9CHLO (NOP5-like snoRNA-binding protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MT56_9CHLO)

HSP 1 Score: 229 bits (584), Expect = 1.140e-70
Identity = 118/141 (83.69%), Postives = 133/141 (94.33%), Query Frame = 0
Query:   14 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 154
            QVV L++YR QL +YL+SRM ++APNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKH+TPKYGLIYHASL+GQ+APKNKGKISRVLAAK ALA+RVDAL D+ DTSIG+ESR+KVEMRLRQLEG
Sbjct:  251 QVVDLADYRGQLYDYLKSRMSSVAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHETPKYGLIYHASLVGQSAPKNKGKISRVLAAKAALAVRVDALGDDPDTSIGLESRAKVEMRLRQLEG 391          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXU6_ECTSI3.170e-8799.33Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YZD1_9STRA2.930e-7381.76Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A383VYQ8_TETOB1.520e-7283.69Nop domain-containing protein n=1 Tax=Tetradesmus ... [more]
A0A250WQJ8_9CHLO1.550e-7182.00Nop domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A7S0CM09_9STRA2.870e-7183.56Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2UY01_9STRA3.510e-7181.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8TJ80_VOLCA5.440e-7185.82Nop domain-containing protein n=2 Tax=Volvocaceae ... [more]
A0A836C6H8_9CHLO7.320e-7185.11Nop domain-containing protein n=1 Tax=Edaphochlamy... [more]
H3G5X2_PHYRM1.040e-7080.28Nop domain-containing protein n=1 Tax=Phytophthora... [more]
A0A5B8MT56_9CHLO1.140e-7083.69NOP5-like snoRNA-binding protein n=2 Tax=Chloropic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002687Nop domainPFAMPF01798Nopcoord: 13..150
e-value: 6.3E-57
score: 192.7
IPR002687Nop domainPROSITEPS51358NOPcoord: 36..154
score: 38.29
IPR042239Nop, C-terminal domainGENE3D1.10.246.90coord: 24..154
e-value: 4.0E-55
score: 186.9
NoneNo IPR availablePANTHERPTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58coord: 13..156
NoneNo IPR availablePANTHERPTHR10894:SF1NUCLEOLAR PROTEIN 58coord: 13..156
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 13..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15616contigEcto-sp13_S_contig15616:57..1083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15616.4173.1mRNA_Ecto-sp13_S_contig15616.4173.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15616 57..1083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15616.4173.1 ID=prot_Ecto-sp13_S_contig15616.4173.1|Name=mRNA_Ecto-sp13_S_contig15616.4173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp
APRNCRCSSQRKTQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGA
RLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASL
IGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLR
QLEGGARLLEAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002687Nop_dom
IPR042239Nop_C
IPR036070Nop_dom_sf