mRNA_Ecto-sp13_S_contig15616.4173.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI) HSP 1 Score: 274 bits (701), Expect = 3.170e-87 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAA 486
QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDT+IGIESRSKVEMRLRQLEGGARLLEAA
Sbjct: 263 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAA 411
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA) HSP 1 Score: 236 bits (601), Expect = 2.930e-73 Identity = 121/148 (81.76%), Postives = 137/148 (92.57%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEA 483
QVVALSEYR+QL +YL++RM AIAPNLTI+VGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APKNKGK+SRVLAAK ALA+RVDA+ + TDT++G+ESR+KVE R+RQLEGG RL A
Sbjct: 263 QVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKVSRVLAAKTALAVRVDAMGETTDTTLGLESRAKVEARIRQLEGGTRLATA 410
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A383VYQ8_TETOB (Nop domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYQ8_TETOB) HSP 1 Score: 228 bits (580), Expect = 1.520e-72 Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 462
QV+ LSEYR QL +YL+SRM A+APNLT++VGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ+ PK+KGKISRVLAAKCALAIRVDAL D TD ++G E+R+KVE RLRQLEG
Sbjct: 19 QVIELSEYRGQLFDYLKSRMAAVAPNLTVLVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSQPKHKGKISRVLAAKCALAIRVDALGDTTDAAVGTEARAKVEARLRQLEG 159
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A250WQJ8_9CHLO (Nop domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQJ8_9CHLO) HSP 1 Score: 233 bits (594), Expect = 1.550e-71 Identity = 123/150 (82.00%), Postives = 135/150 (90.00%), Query Frame = 1
Query: 37 TQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAA 486
TQV+ LSEYR QL EYL+SRM AIAPNLT++VGELVGARLIAHAGSL+NLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ++PK KGKISRVLAAKCAL+IRVDAL D D SIGIESR+KVE R+RQLEG + E A
Sbjct: 257 TQVIELSEYRAQLFEYLKSRMAAIAPNLTVLVGELVGARLIAHAGSLVNLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSSPKFKGKISRVLAAKCALSIRVDALGDSADASIGIESRAKVEARMRQLEGKVLVSEGA 406
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A7S0CM09_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CM09_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.870e-71 Identity = 122/146 (83.56%), Postives = 136/146 (93.15%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADET----DTSIGIESRSKVEMRLRQLEGG 465
QV++++EYR QL EYL++RM AIAPNLTI+VGELVGARLI+HAGSL+NLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQA PKNKGK+SRVLAAKCALAIRVDAL+DET DT++G ESR+KVE RLRQLEGG
Sbjct: 251 QVLSMTEYRSQLFEYLKNRMNAIAPNLTILVGELVGARLISHAGSLMNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKNKGKVSRVLAAKCALAIRVDALSDETTGIPDTTLGYESRAKVEARLRQLEGG 396
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A7S2UY01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY01_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.510e-71 Identity = 118/144 (81.94%), Postives = 133/144 (92.36%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGGAR 471
QVV+LSEYR+QL +YL++RMQAIAPNLTI+VGELVGARL+AHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ + KNKGKISRVLAAKCAL IR+DAL + +DTS+G E R KVEMR+R LEGGAR
Sbjct: 208 QVVSLSEYRVQLYDYLKNRMQAIAPNLTILVGELVGARLLAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTSNKNKGKISRVLAAKCALGIRMDALGEVSDTSVGFEGRQKVEMRIRMLEGGAR 351
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: D8TJ80_VOLCA (Nop domain-containing protein n=2 Tax=Volvocaceae TaxID=3065 RepID=D8TJ80_VOLCA) HSP 1 Score: 231 bits (590), Expect = 5.440e-71 Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 462
QV+ALSEYR QL EYLR+RM AIAPNLT++VGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ+APK KGKISRVLAAKCALAIRVDAL D D ++G+E+R KVE RLRQLEG
Sbjct: 259 QVIALSEYRGQLFEYLRNRMSAIAPNLTVLVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSAPKYKGKISRVLAAKCALAIRVDALGDTNDATVGVEARQKVEARLRQLEG 399
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A836C6H8_9CHLO (Nop domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C6H8_9CHLO) HSP 1 Score: 231 bits (589), Expect = 7.320e-71 Identity = 120/141 (85.11%), Postives = 132/141 (93.62%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 462
QV+ALSEYR QL EYLR+RM AIAPNLT++VGELVGARLIAH+GSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQAAPK KGKISRVLAAKC+LAIRVDAL D +D ++G+E+R KVE RLRQLEG
Sbjct: 259 QVIALSEYRGQLFEYLRNRMNAIAPNLTVLVGELVGARLIAHSGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQAAPKYKGKISRVLAAKCSLAIRVDALGDSSDATVGVEARQKVEARLRQLEG 399
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: H3G5X2_PHYRM (Nop domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5X2_PHYRM) HSP 1 Score: 222 bits (565), Expect = 1.040e-70 Identity = 114/142 (80.28%), Postives = 130/142 (91.55%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEGG 465
QV++L+EYR QL +YL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK ALA+RVDAL D T+ +IG ++R+KVE R+RQLE G
Sbjct: 8 QVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVRQLENG 149
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Match: A0A5B8MT56_9CHLO (NOP5-like snoRNA-binding protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MT56_9CHLO) HSP 1 Score: 229 bits (584), Expect = 1.140e-70 Identity = 118/141 (83.69%), Postives = 133/141 (94.33%), Query Frame = 1
Query: 40 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTSIGIESRSKVEMRLRQLEG 462
QVV L++YR QL +YL+SRM ++APNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKH+TPKYGLIYHASL+GQ+APKNKGKISRVLAAK ALA+RVDAL D+ DTSIG+ESR+KVEMRLRQLEG
Sbjct: 251 QVVDLADYRGQLYDYLKSRMSSVAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHETPKYGLIYHASLVGQSAPKNKGKISRVLAAKAALAVRVDALGDDPDTSIGLESRAKVEMRLRQLEG 391 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15616.4173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15616.4173.1 >prot_Ecto-sp13_S_contig15616.4173.1 ID=prot_Ecto-sp13_S_contig15616.4173.1|Name=mRNA_Ecto-sp13_S_contig15616.4173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp APRNCRCSSQRKTQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGAback to top mRNA from alignment at Ecto-sp13_S_contig15616:57..1083+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15616.4173.1 ID=mRNA_Ecto-sp13_S_contig15616.4173.1|Name=mRNA_Ecto-sp13_S_contig15616.4173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1027bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15616:57..1083+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15616:57..1083+ >mRNA_Ecto-sp13_S_contig15616.4173.1 ID=mRNA_Ecto-sp13_S_contig15616.4173.1|Name=mRNA_Ecto-sp13_S_contig15616.4173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15616:57..1083+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |