mRNA_Ecto-sp13_S_contig15610.4171.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15610.4171.1
Unique NamemRNA_Ecto-sp13_S_contig15610.4171.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A6H5KHX7_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX7_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 6.010e-141
Identity = 217/226 (96.02%), Postives = 219/226 (96.90%), Query Frame = 1
Query:    1 QGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKVRTKGARNNIEQSF 678
            QGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSE PENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQE+FPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVK R KG  N+IE  F
Sbjct:   16 QGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSETPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKARAKGTTNSIELLF 241          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: D7FUE1_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE1_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 2.650e-131
Identity = 211/228 (92.54%), Postives = 216/228 (94.74%), Query Frame = 1
Query:    1 QGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKVRTKGARNNIEQSFLC 684
            +GYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMP+NFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQ++FPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKV   G     +    C
Sbjct:  281 EGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPDNFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQKEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKVIRPGETGRDDDDIRC 508          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA)

HSP 1 Score: 318 bits (816), Expect = 2.750e-103
Identity = 154/223 (69.06%), Postives = 178/223 (79.82%), Query Frame = 1
Query:    4 GYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVK--VRTKGARNNI 666
            GYDY R+FGANCEIVCGY+P+PVGIVGPL L+G+EVYVPMATTEGCLVAST              + +LKDGITRAPCLRMPD + AA +K+W E P NF  +KAAF++TT FG+L  +   VAGRNVYLRF C AGDAMGMNMVSKG LA VDLL E FPE+EL+AISGNMCTDKK AAINW+EGRGKS+VCEARIPG++VE+TLKTTV+  V T   +N I
Sbjct:  206 GYDYARVFGANCEIVCGYVPLPVGIVGPLLLDGREVYVPMATTEGCLVASTNRGCKAISQGGGARSVVLKDGITRAPCLRMPDTIGAARVKQWVEAPANFARVKAAFESTTSFGRLNAVTGAVAGRNVYLRFVCAAGDAMGMNMVSKGCLAAVDLLTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVRAIVETNVQKNLI 428          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA)

HSP 1 Score: 293 bits (751), Expect = 6.220e-95
Identity = 144/217 (66.36%), Postives = 166/217 (76.50%), Query Frame = 1
Query:    7 YDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKVRTKGAR 657
            +DYERIFGANCEIV GY+P+P G+VGPL L+G+ VYVPMATTEGCLVAST              A +LKDGITRAPC+ MP AMAAADLK W E PENF+AI+ AF +TT FG+L+    T+AGRNVYLR  CFAGDAMGMNMVSKG L V++LL+E FPEMELVAISGN+C DKK AAINW+EGRGKS+V EA I    V  TLKTTV+   +  R
Sbjct:   83 FDYERIFGANCEIVVGYVPLPCGVVGPLLLDGEPVYVPMATTEGCLVASTNRGCKAITACGGARARVLKDGITRAPCILMPSAMAAADLKAWVEEPENFQAIQNAFNSTTSFGRLKSCTPTIAGRNVYLRCVCFAGDAMGMNMVSKGCLKVIELLEEHFPEMELVAISGNVCCDKKPAAINWIEGRGKSVVVEATITADVVRKTLKTTVEAMVEANR 299          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: B7GE13_PHATC (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE13_PHATC)

HSP 1 Score: 283 bits (723), Expect = 9.130e-92
Identity = 138/208 (66.35%), Postives = 160/208 (76.92%), Query Frame = 1
Query:   10 DYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTV 633
            DY R+ GANCEIV GY+P+PVG+VGPLT+NG+ VYVPMATTEGCLVAST              A LL+DGITRAPC+RMP A  AA LK W E P++F  +K AF++TT FGKL     TVAGRNVYLR  CF+GDAMGMNMVSKG LAV++ LQ++FPE+ LVA+SGNMCTDKK+AA NW+EGRGKSIV EA IP   V  TLKTTV
Sbjct:   12 DYTRVHGANCEIVVGYVPLPVGLVGPLTVNGETVYVPMATTEGCLVASTNRGAKAITAGGGATAVLLRDGITRAPCVRMPSAAQAAHLKLWCETPQHFSTLKRAFESTTSFGKLLKCAPTVAGRNVYLRLTCFSGDAMGMNMVSKGSLAVIETLQQEFPELVLVALSGNMCTDKKAAATNWLEGRGKSIVVEATIPKDVVTNTLKTTV 219          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A7S2I1A6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1A6_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.920e-91
Identity = 137/209 (65.55%), Postives = 162/209 (77.51%), Query Frame = 1
Query:   10 DYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVK 636
            DY R+FGANCEIV GY+PIPVG+VGPLTLNGQ VY+PMATTEGCLVAST              + +L+DGITRAPC+RM  A  AADLK W E P NF  +K AF++TT FGKL  +  TVAG+NVYLR  CFAGDAMGMNMVSKG LAV+D L++ FP+++LVA+SGNMCTDKK+AA NW+ GRGKS+V EA IP   V +TLKTTV+
Sbjct:  165 DYSRVFGANCEIVVGYVPIPVGMVGPLTLNGQTVYIPMATTEGCLVASTNRGCKAITQGSGATSVILRDGITRAPCVRMSSAKQAADLKLWCEQPNNFATLKQAFESTTSFGKLLTVEPTVAGKNVYLRLQCFAGDAMGMNMVSKGSLAVIDHLKQVFPDLDLVALSGNMCTDKKAAATNWIHGRGKSVVIEATIPNHIVRSTLKTTVQ 373          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A1Z5KS57_FISSO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS57_FISSO)

HSP 1 Score: 286 bits (733), Expect = 2.490e-90
Identity = 135/208 (64.90%), Postives = 163/208 (78.37%), Query Frame = 1
Query:   10 DYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTV 633
            DY R+ GANCEIV GY+P+PVGI+GPLT+NG+  Y+PMATTEGCLVAST              A +++DGITRAPC+RMP AMAAA LK W E PENF  +KAAF++TT FGKL    +T+AG+NVYLR  CF+GDAMGMNMVSKG LAV++ L+++FPE+ LVA+SGNMCTDKK+AA NW+EGRGKS+V EA IP   V  TLKTTV
Sbjct:  233 DYSRVHGANCEIVVGYVPLPVGIIGPLTINGESFYIPMATTEGCLVASTNRGAKAITEGGGALAQIVRDGITRAPCIRMPTAMAAAQLKLWCETPENFVQMKAAFESTTSFGKLHECKATIAGKNVYLRLVCFSGDAMGMNMVSKGTLAVIECLRKEFPELSLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPKDVVRKTLKTTV 440          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A6T5VRD5_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VRD5_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.760e-90
Identity = 143/208 (68.75%), Postives = 174/208 (83.65%), Query Frame = 1
Query:    7 YDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTT 630
            YDY ++FGANCEIV GYIPIPVGIVGPL+LNG+ +YVPMATTEGCLVAST XXXXXXXXXXXXX  LLKDGITRAPCLR+P A+ AA +K W   P+N+  ++ AF +TT +G+L+ + +T+AGRN+YLRF C AGDAMGMNMVSKG L  ++LL+ +FP+MEL+AISGNMCTDKK +AINW+ GRGKSIV EA IP K V+  LK++
Sbjct:   34 YDYGKVFGANCEIVVGYIPIPVGIVGPLSLNGEYLYVPMATTEGCLVASTNXXXXXXXXXXXXXXVLLKDGITRAPCLRLPSALRAAAVKAWLLSPDNYALVEEAFNSTTSYGRLESIDATIAGRNIYLRFCCMAGDAMGMNMVSKGCLKAIELLEVEFPDMELIAISGNMCTDKKPSAINWILGRGKSIVVEAIIPDKIVKNVLKSS 241          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: A0A7S1YA95_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YA95_9STRA)

HSP 1 Score: 284 bits (727), Expect = 6.100e-89
Identity = 138/208 (66.35%), Postives = 162/208 (77.88%), Query Frame = 1
Query:   10 DYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTV 633
            DY ++ GANCEIV GY+P+PVGIVGPLTLN + VYVPMATTEGCLVAST              A +LKDGITRAPC+RM  A  AA LK W E+P+NF+ +KAAF++TT FGKL     TVAGRNVYLR  CF+GDAMGMNMVSKG LAV+DLL+  FP+++LVA+SGNMCTDKK+AA NW+EGRGKS+V EA IP   V +TLKTTV
Sbjct:  299 DYSKVHGANCEIVVGYVPLPVGIVGPLTLNDESVYVPMATTEGCLVASTQRGAKAITQGGGATAVVLKDGITRAPCVRMASAADAAKLKLWCEVPQNFQQLKAAFESTTSFGKLLSCNPTVAGRNVYLRLCCFSGDAMGMNMVSKGSLAVIDLLKRTFPQLQLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPQAVVRSTLKTTV 506          
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Match: B8C0R4_THAPS (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0R4_THAPS)

HSP 1 Score: 275 bits (704), Expect = 7.050e-89
Identity = 130/208 (62.50%), Postives = 161/208 (77.40%), Query Frame = 1
Query:   10 DYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTV 633
            DY+R+ GANCEIV GYIPIPVGIVGP+TLNG+ VY+PMATTEGCLVAST              + +L+DGITRAPC+R+P A  AA +  W E  +NF  +K AF++TT FGKL     TVAGRNVY+R  CF+GDAMGMNM+SKG LAV++ L+E+FP++ LVA+SGNMCTDKK+AA+NW+EGRGKS+V EA IP   V +TLKT+V
Sbjct:   13 DYKRVLGANCEIVVGYIPIPVGIVGPVTLNGESVYIPMATTEGCLVASTNRGCKAITQGSGARSTILRDGITRAPCVRLPSAHEAAQVHLWIEEADNFAKLKEAFESTTSFGKLIEASPTVAGRNVYIRLRCFSGDAMGMNMISKGSLAVIECLREQFPQLSLVALSGNMCTDKKAAAMNWIEGRGKSVVIEATIPKDVVRSTLKTSV 220          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15610.4171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHX7_9PHAE6.010e-14196.02Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
D7FUE1_ECTSI2.650e-13192.54Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A835YX65_9STRA2.750e-10369.063-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S1Y0Q7_9STRA6.220e-9566.363-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
B7GE13_PHATC9.130e-9266.353-hydroxy-3-methylglutaryl coenzyme A reductase (F... [more]
A0A7S2I1A6_9STRA1.920e-9165.553-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A1Z5KS57_FISSO2.490e-9064.903-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A6T5VRD5_9STRA4.760e-9068.75Hydroxymethylglutaryl-CoA reductase (NADPH) (Fragm... [more]
A0A7S1YA95_9STRA6.100e-8966.353-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
B8C0R4_THAPS7.050e-8962.503-hydroxy-3-methylglutaryl coenzyme A reductase (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15610contigEcto-sp13_S_contig15610:418..2296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score396.7
Seed ortholog evalue7.1e-108
Seed eggNOG ortholog2880.D7FUE1
Preferred nameHMGR
Model size684
KEGG rclassRC00004,RC00644
KEGG koko:K00021
KEGG ReactionR02082
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04152,ko04976,map00900,map01100,map01110,map01130,map04152,map04976
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.hydroxymethylglutaryl-CoA reductase (NADPH) activity
EggNOG OGsCOG1257@1,KOG2480@2759
EC1.1.1.34
Cds size684
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462827.8242087-CDS-Ecto-sp13_S_contig15610:417..5521681462827.8242087-CDS-Ecto-sp13_S_contig15610:417..552Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15610 418..552 +
1681462827.8362284-CDS-Ecto-sp13_S_contig15610:809..10171681462827.8362284-CDS-Ecto-sp13_S_contig15610:809..1017Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15610 810..1017 +
1681462827.8448775-CDS-Ecto-sp13_S_contig15610:1560..16941681462827.8448775-CDS-Ecto-sp13_S_contig15610:1560..1694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15610 1561..1694 +
1681462827.8561099-CDS-Ecto-sp13_S_contig15610:2089..22961681462827.8561099-CDS-Ecto-sp13_S_contig15610:2089..2296Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15610 2090..2296 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15610.4171.1prot_Ecto-sp13_S_contig15610.4171.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15610 418..2296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15610.4171.1

>prot_Ecto-sp13_S_contig15610.4171.1 ID=prot_Ecto-sp13_S_contig15610.4171.1|Name=mRNA_Ecto-sp13_S_contig15610.4171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp
QGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVA
STNRGCKAISQGGGCRAALLKDGITRAPCLRMPDAMAAADLKKWSEMPEN
FEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGV
LAVVDLLQEKFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPG
KHVEATLKTTVKVRTKGARNNIEQSFLC
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mRNA from alignment at Ecto-sp13_S_contig15610:418..2296+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15610.4171.1 ID=mRNA_Ecto-sp13_S_contig15610.4171.1|Name=mRNA_Ecto-sp13_S_contig15610.4171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15610:418..2296+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCTACGACTACGAGCGCATCTTCGGCGCGAATTGCGAGATCGTGTG CGGGTACATCCCCATCCCCGTGGGCATCGTGGGACCCCTCACGCTCAACG GGCAAGAGGTGTACGTGCCGATGGCCACCACCGAGGTGAGCTAGCTTTTA GCGCTGGCCCCGTATAGCCCAAGTAACCAGTGACACGTACGAAGCTCAAT ATGTGCCCGAGGGTCTTGCCACCACCAGGTGAGATAGTTTTGCGATTGCG CCCCGCTTGTACTGTGTTTTTTGTTCGTTTGTGGTACGCTGGCGTGGGTG TCTGGTCGCCTGCAACGCAGGAGATGTACTTGACCATGAAATACATTTTA ACACCCCGCTGCTGTGTGTTTTGTTCGGTCGTACACCGGCAGGGGTGCTT GGTTGCCAGCACCAACCGCGGCTGCAAGGCCATCTCCCAGGGGGGCGGGT GCCGCGCGGCGCTTCTCAAGGACGGCATCACTCGGGCGCCGTGCCTGCGG ATGCCCGACGCGATGGCGGCGGCGGACCTTAAGAAATGGTCTGAGATGCC GGAAAACTTCGAGGCCATCAAGGCCGCCTTCCAAACTACCACTCGGTTCG GTGAGATGGCTTGTGAACGTCGTTGTTGTGGTCGATGTTAATTTTGATGT TGCTGTTCTGCTGCTGCTGCTGTTGGTGGTGTTGCGTTGGATATTTATTT GTGTTTCTTTTACTGCTGATGGGTGTCTACTGCATCGTTGTGGTTGCGGT CGGTTTTCTCGTAGTTTTGCTGCTGCTACTGCTGTTGTGGTTGATTTTTG CTTTTGATGACGTTGTTCTGTTTTCAAATATTAGAAGTCGTCCTTAACTC TCTTTGGCACCTCTTTTAGTACTAAGCGGTCGAATAGCCTCTATAAAATT TTGTACTGATGCACCCATACACTCGCTCCCGTTCAGGCTTCGCCAAAAAA CGGCCTGCAGGGAATCATGCTTGCTATAATTGCAACCCGTTGCATTGTTT ACGTGCGGCGCATTTGTCGTGTGTCCGGGGAGCAACCTGTTCGTGCCTCT GGGTCTCTCGTTTGGTGTTGTTTGAACCCGAGACACGGTGATTGTTACAG CGGCGCGCGTTTTTTGTTTGCGTTTTTTTTTTGTTGTTTGTAGGCAAGCT GCAGGGGCTGATGTCCACCGTGGCTGGACGCAACGTGTACCTTCGGTTCA ACTGCTTCGCCGGAGATGCTATGGGGATGAACATGGTCTCCAAGGGGGTT CTGGCGGTCGTCGACCTCTTGCAGGAGGTGAGAGCTGGTTGTCGTCGCTG TTGACAAAAAGTTGGTGACGATGGTACAGGTGATGGCTGCATGGCCATGT AGTCGCATGTGTTCGCCCGACCCATCGAGGGTCATCGCTAGCATGAAATG CTCAACATCAAGGCGCTCGGTTGAGTCAATTTCAAAACAACCCGTCCAGC GGTGCAGTAGTGAAGCCTTTGGGTTTTCGTGCGTGTCAGGCAGGCTTTTT TTCGGGATGGACGACGAACGCCCCTGGTCCGAGGGTGATCGCGCAGATTG GCCGACCTCTACCTTTTGCGACGAGAGATACAGCAGAGCTCTATTCTCTC TCTCACTCTCACCTCTCGCCCTTGCCCTTGCTCTGTCTCTGTCGTCAAAA CTGTTGGATTTGGAGTGCTTAGAAATTCCCTGAGATGGAGCTTGTGGCGA TTTCTGGCAACATGTGCACGGACAAGAAGTCGGCCGCGATCAACTGGGTG GAGGGCCGCGGAAAGTCGATTGTTTGCGAGGCGCGTATCCCGGGGAAGCA CGTGGAGGCCACTCTCAAGACCACCGTCAAGGTAAGGACTAAGGGCGCAA GGAATAATATTGAGCAATCTTTTTTGTGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15610:418..2296+

>mRNA_Ecto-sp13_S_contig15610.4171.1 ID=mRNA_Ecto-sp13_S_contig15610.4171.1|Name=mRNA_Ecto-sp13_S_contig15610.4171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=684bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15610:418..2296+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCTACGACTACGAGCGCATCTTCGGCGCGAATTGCGAGATCGTGTG
CGGGTACATCCCCATCCCCGTGGGCATCGTGGGACCCCTCACGCTCAACG
GGCAAGAGGTGTACGTGCCGATGGCCACCACCGAGGGGTGCTTGGTTGCC
AGCACCAACCGCGGCTGCAAGGCCATCTCCCAGGGGGGCGGGTGCCGCGC
GGCGCTTCTCAAGGACGGCATCACTCGGGCGCCGTGCCTGCGGATGCCCG
ACGCGATGGCGGCGGCGGACCTTAAGAAATGGTCTGAGATGCCGGAAAAC
TTCGAGGCCATCAAGGCCGCCTTCCAAACTACCACTCGGTTCGGCAAGCT
GCAGGGGCTGATGTCCACCGTGGCTGGACGCAACGTGTACCTTCGGTTCA
ACTGCTTCGCCGGAGATGCTATGGGGATGAACATGGTCTCCAAGGGGGTT
CTGGCGGTCGTCGACCTCTTGCAGGAGAAATTCCCTGAGATGGAGCTTGT
GGCGATTTCTGGCAACATGTGCACGGACAAGAAGTCGGCCGCGATCAACT
GGGTGGAGGGCCGCGGAAAGTCGATTGTTTGCGAGGCGCGTATCCCGGGG
AAGCACGTGGAGGCCACTCTCAAGACCACCGTCAAGGTAAGGACTAAGGG
CGCAAGGAATAATATTGAGCAATCTTTTTTGTGT
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