mRNA_Ecto-sp13_S_contig1560.4166.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1560.4166.1
Unique NamemRNA_Ecto-sp13_S_contig1560.4166.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: D7FHS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS1_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 1.110e-135
Identity = 224/227 (98.68%), Postives = 224/227 (98.68%), Query Frame = 3 
Query:  348 MVTGAAIPADDPVVVKSLTSQQVESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGGGGRGAGSVGGDNGFSPVFSAAAGTGGRLRSGAGA 1028
            MVTGAAIPADDPVVVKSLTSQ VESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGGGGRGAGSVGGDNG SPVFSAAAGTGGRLR GAGA
Sbjct:    1 MVTGAAIPADDPVVVKSLTSQ-VESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGGGGRGAGSVGGDNGLSPVFSAAAGTGGRLRGGAGA 226
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A6H5JIY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY2_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 4.390e-69
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 3 
Query:  651 RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGGGGRGAGSVGGDNGFSPVFSAAAGTGGRLRSGAGA 1028
            RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNE+QGGGGRGAGSVGGDNGFSPVFSAAAGTGGRLR GAGA
Sbjct:    3 RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEKQGGGGRGAGSVGGDNGFSPVFSAAAGTGGRLRGGAGA 128
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A176VK39_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VK39_MARPO)

HSP 1 Score: 80.5 bits (197), Expect = 7.360e-12
Identity = 48/165 (29.09%), Postives = 94/165 (56.97%), Query Frame = 3 
Query:  432 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGG 926
            T+    +QR++++ Y +L+ +NV + LTL  V  F+T LV  +  L +K   ++RR ++  SLL  A ++   R+   +  +E ++  L +D  ++N+LQ+ LK SPAY+ M+EYG++   +  +   + +     ++E    +S +++LA+ K +   + E GG
Sbjct:  427 TSSGSMVQRKIKEQYDELVRSNVAKSLTLAQVGRFTTCLVEAKSSLQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLEIEQKKLEEDTVVYNRLQEQLKLSPAYQKMLEYGRTHFELQPNTGQLIEKVDSEDME----ISFEELLAQEKKDSFWSAENGG 587
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A2R6XWC9_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XWC9_MARPO)

HSP 1 Score: 77.4 bits (189), Expect = 6.950e-11
Identity = 40/118 (33.90%), Postives = 73/118 (61.86%), Query Frame = 3 
Query:  432 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQS 785
            T+    +QR++++ Y +L+ +NV + LTL  V  F+T LV  +  L +K   ++RR ++  SLL  A ++   R+   +  +E ++  L +D  ++N+LQ+ LK SPAY+ M+EYG++
Sbjct:  707 TSSGSMVQRKIKEQYDELVRSNVAKSLTLAQVGRFTTCLVEAKSSLQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLEIEQKKLEEDTVVYNRLQEQLKLSPAYQKMLEYGRT 824
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A7I4E987_PHYPA (Uncharacterized protein n=7 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E987_PHYPA)

HSP 1 Score: 74.3 bits (181), Expect = 5.700e-10
Identity = 39/118 (33.05%), Postives = 70/118 (59.32%), Query Frame = 3 
Query:  432 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQS 785
            T     +QR++++ Y +L+ +N  + LTL  V  F+T LV  +  L +K   ++RR ++  SLL  A ++   R+   +  +E ++  L +D  ++N+LQ+ LK SPAY  M+EYG++
Sbjct:  584 TYSGSMVQRKIKEQYDELVRSNAAKTLTLAQVGRFTTCLVETKSALQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLENEQKKLEEDTVVYNRLQEQLKLSPAYLKMLEYGRA 701
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A3S3NYD6_9MAGN (Uncharacterized protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NYD6_9MAGN)

HSP 1 Score: 68.2 bits (165), Expect = 1.950e-8
Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  432 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMME 773
            T+   A QR+++  Y +L+ +N  + LT+  V  F+  L+  R  L  K   ++R+ ++  +LL  A R+   R+Y  +  +E ++  L +D  ++N+LQ+ LK SPAYK M+E
Sbjct:  204 TSAASATQRKIKQHYDQLVKSNDAKALTMAQVGQFANCLIEARNELQHKSEIIQRKFTITKALLFKADRSSFDRLYQQIYKLEAEQKRLEEDASVYNRLQEQLKLSPAYKQMLE 317
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A1D1Z5Y6_9ARAE (Chaperone protein DnaK (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z5Y6_9ARAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.000e-8
Identity = 36/113 (31.86%), Postives = 64/113 (56.64%), Query Frame = 3 
Query:  441 NGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYG 779
            + A QR ++  Y +L+ +N  + LT+  V  F+  L+  R  L  K   ++R+ ++  +LL  A R+   R+   +  +E ++  L +D  ++N+LQ+ LK SPAYK M+E G
Sbjct:   35 SSATQRRIKQQYDQLVKSNQAKALTMAQVGEFANCLIEARNELQHKSEVIQRKFTITKALLFKADRSSFDRLCQQIYKLEAEQKRLEEDAVVYNRLQEQLKLSPAYKTMLEIG 147
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A1U7YW96_NELNU (uncharacterized protein LOC104586621 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YW96_NELNU)

HSP 1 Score: 67.4 bits (163), Expect = 3.440e-8
Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 3 
Query:  432 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQ 782
            T+ +   QR+++  Y +L+ +N  + LTL  V  F+  L+  R  L  K   ++R+ ++  +LL  A R+   R+   +  +E ++  L +D  ++N+LQQ LK SPAYK M+E G+
Sbjct:  203 TSSSSVTQRKIKQQYDQLVKSNDSKALTLAQVCQFANCLIEARNELKHKSEIIQRKFTITKALLFKADRSSFDRLCQQMYKLEAEQKRLEEDALVYNRLQQQLKLSPAYKKMLEIGE 319
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: A0A835DJU0_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DJU0_9MAGN)

HSP 1 Score: 67.0 bits (162), Expect = 4.530e-8
Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  432 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMME 773
            T+ + A QR+++  Y +L  ++    LTL  V  F+  L+  +  L  K   ++R+ ++  +LL  A R+   R+Y  ++ +E ++  L +D  ++N+LQQ LK SPAYK M+E
Sbjct:  201 TSSSSATQRKIKQQYDQLKKSHESNGLTLAQVGQFANCLIEAKNELQHKSEIIQRKFTITKALLIKANRSSFDRLYQQISKLESEQKRLEEDASVYNRLQQQLKLSPAYKKMLE 314
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BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Match: B8LR74_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LR74_PICSI)

HSP 1 Score: 67.0 bits (162), Expect = 5.970e-8
Identity = 41/152 (26.97%), Postives = 83/152 (54.61%), Query Frame = 3 
Query:  438 RNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFK 893
            R   +QR ++  Y +L+ +N    LTL  V  F+  LV  +  L +K   ++R+ ++  SLL  A ++   R+   +  +E ++  L +D  ++N+LQ+ LK SP+Y+ M+EYG      +++   + + ++  + E    +S +++LA+ K
Sbjct:  259 RGSVMQRRIKQHYDELMHSNTAGPLTLAQVGRFTNCLVEAKAALLQKSETIQRKFTIAKSLLVKADKSSFDRLCGQIYRLETEQKRLEEDTKVYNRLQEQLKISPSYQKMLEYGHGHFQSHLNTGQLLEKSEAEDAE----ISFEELLAQEK 406
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1560.4166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FHS1_ECTSI1.110e-13598.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIY2_9PHAE4.390e-6998.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A176VK39_MARPO7.360e-1229.09Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A2R6XWC9_MARPO6.950e-1133.90Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A7I4E987_PHYPA5.700e-1033.05Uncharacterized protein n=7 Tax=Physcomitrium pate... [more]
A0A3S3NYD6_9MAGN1.950e-832.46Uncharacterized protein n=1 Tax=Cinnamomum micrant... [more]
A0A1D1Z5Y6_9ARAE2.000e-831.86Chaperone protein DnaK (Fragment) n=1 Tax=Anthuriu... [more]
A0A1U7YW96_NELNU3.440e-832.48uncharacterized protein LOC104586621 n=2 Tax=Nelum... [more]
A0A835DJU0_9MAGN4.530e-832.46Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
B8LR74_PICSI5.970e-826.97Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1560contigEcto-sp13_S_contig1560:2125..8944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score418.3
Seed ortholog evalue3.6e-114
Seed eggNOG ortholog2880.D7FHS1
Model size2276
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.3hydroxyisobutyrate dehydrogenase
EggNOG OGsCOG2084@1,KOG0409@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_006560.1
Cds size1089
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1560.4166.1prot_Ecto-sp13_S_contig1560.4166.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1560 3289..8921 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462827.349118-UTR-Ecto-sp13_S_contig1560:2124..32881681462827.349118-UTR-Ecto-sp13_S_contig1560:2124..3288Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1560 2125..3288 -
1681462827.422275-UTR-Ecto-sp13_S_contig1560:8921..89441681462827.422275-UTR-Ecto-sp13_S_contig1560:8921..8944Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1560 8922..8944 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462827.359845-CDS-Ecto-sp13_S_contig1560:3288..35461681462827.359845-CDS-Ecto-sp13_S_contig1560:3288..3546Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1560 3289..3546 -
1681462827.3708487-CDS-Ecto-sp13_S_contig1560:4155..42491681462827.3708487-CDS-Ecto-sp13_S_contig1560:4155..4249Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1560 4156..4249 -
1681462827.3799691-CDS-Ecto-sp13_S_contig1560:4884..49921681462827.3799691-CDS-Ecto-sp13_S_contig1560:4884..4992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1560 4885..4992 -
1681462827.3885584-CDS-Ecto-sp13_S_contig1560:5779..59221681462827.3885584-CDS-Ecto-sp13_S_contig1560:5779..5922Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1560 5780..5922 -
1681462827.399696-CDS-Ecto-sp13_S_contig1560:6176..62751681462827.399696-CDS-Ecto-sp13_S_contig1560:6176..6275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1560 6177..6275 -
1681462827.4132779-CDS-Ecto-sp13_S_contig1560:8534..89211681462827.4132779-CDS-Ecto-sp13_S_contig1560:8534..8921Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1560 8535..8921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1560.4166.1

>prot_Ecto-sp13_S_contig1560.4166.1 ID=prot_Ecto-sp13_S_contig1560.4166.1|Name=mRNA_Ecto-sp13_S_contig1560.4166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=363bp
MLHVQGTTGMARESFGPEPSPSNWKPDDIGAAAAAGGLDLHTKTAEGRLS
GEPVYGWGVQSATKPSAPVSTAPDAHEQRRQQRQQRQRPADTAGSGFGGR
PKNVVPPSMVTGAAIPADDPVVVKSLTSQQVESSSITTRNGAIQREMQDA
YRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLL
KHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMME
YGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQG
GGGRGAGSVGGDNGFSPVFSAAAGTGGRLRSGAGAGGLGKAGDAAAPQKN
KKGKKGKKDRRR*
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mRNA from alignment at Ecto-sp13_S_contig1560:2125..8944-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1560.4166.1 ID=mRNA_Ecto-sp13_S_contig1560.4166.1|Name=mRNA_Ecto-sp13_S_contig1560.4166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6820bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1560:2125..8944- (Ectocarpus species13 EcNAP12_S_4_19m)
TATCCTCCCCTTTCAACCCGCTGATGCTTCACGTTCAAGGGACAACGGGC
ATGGCGCGAGAGAGTTTCGGGCCCGAGCCCTCCCCGTCTAACTGGAAGCC
AGACGACATTGGGGCAGCAGCAGCAGCAGGAGGACTAGACCTGCACACGA
AGACCGCCGAAGGACGTTTGTCCGGAGAGCCAGTTTACGGATGGGGGGTA
CAGTCTGCTACGAAGCCTTCGGCACCGGTATCGACAGCACCTGACGCCCA
CGAGCAGCGGCGGCAACAGCGGCAGCAGCGGCAAAGGCCTGCGGATACTG
CTGGTTCGGGCTTCGGAGGGAGACCGAAAAACGTGGTACCACCTTCAATG
GTGACGGGAGCCGCGATACCCGCAGACGACCCGGTGGTTGTCAAGAGCTT
GACATCACAGGTGCGCGCTGCTGCTGTGTGCGCGCCTTTGCTAGCGTGTT
TTTCGCACAACATCACCCGTTGATGTGCAGCAACATGCTTTAGTTTGTGA
GAGATTTCCCGAAAAAAAAAACGTGCCCGTGCCGTCTTGACGCGAGCGCA
GTTGCACTCCTTCTACAGCAGTACATTGTAGCCTACTGTTGCGATGCGGT
CCGAACGTCCAAACATACAACATACTGTGGGTATATCTCGAATGGGTAGT
CTTTCTGTACGTGTATTTATTTCTCCTTAACACAACATACACCCCCCGGG
TTTAGCGGCGGGAAATGAAGAAACGCCGCTCGTGAAACAACGTACAGTCC
GAGCTCGAAATCCGAGGATATTATGGAATTCTGGGGACACCTTACACTTC
GGCTGGTTCTACTTTTCAGGTTGTCATTCGGGGGTGGCCTCCCGTTGGTC
CGGCACTCCTGTGGGTGTAATGATGATCCGGCTTCTTCATGTCTCAATTT
GGCTCTTTTTCTCGAACATGATCTGGGAGACATGTATTCGTTCCTCTTGA
AGTCGAGATAAACCATTTATGCATACCAGTGACTAAAATAGTCTCAGCGC
GTGGTTTCATTTTCGGCTTCCATACAAAGATGGGGAGACTATCGCCATAA
GTAGGAATAAAGCACATACACGCCAGCTACATTATGAAAAGGTTGTAGCA
AATCATCGTGGAATCGTGGGGTTCAGTCAGTTGGAAACCTTCATCCTTAA
ATGCTTCTGACGGACGTCGGTCCACTCACTCGCACGTTTGGCTTCATTTT
TCCGACAATATCGGTACATGATCAATCTTCGGCAAAAGTGGTTTGCCGTG
TGATTGGGCGCAGTAACTTACAATTGCCGCCTTGTTTGGTTTCACTTGAA
AGTTTTGGCTATAGGCGATGGCAATCATTACCGCCGTGCTGGGCGGTCCC
GGTGATCCGCCGTTTAACCGCCATTTTTTTGGTTTTCCCGCCGCCGCCAA
TCTCGTTACCGCCACAAAACGCGTGACCGCCTACCGCCGAGACTTCGATC
GCCGTATGGCGTTACCGCCGAAAAATTACCGCCGAAATTCTATTTTACCT
CCTCCACCAAAGTCGTTACCGCGGAAAATCGCATGACCTCCTACCGCCGA
AACCATTTCCCAATACGCCCGAAACATAACAACCAAAATTCTGTTTTACC
GCCCCGGCCCAGTCGTCACCGCTGAAAAATTAATTACGGCCTATCGCCAA
AACAAAAACCGCCGAATGGCATCACCGCCGAAAACGTGTCCTCCTAAAAG
ACCGTCACCGAGTTAACTCTTGAAAAATACCAAGCATCACAGAACCAGCC
GATTGTTGCTTCCCTCCCCCGATGTGTGGCATCTCGACCTCTTCGGTCGG
ATTCCTGTATGGTAGATTCACAAGGACTCCGAGACATGGCTTTCTGTTCA
AGGTTGTGCGATCTGTTCTTTTTGGCGGGGTCTTCTGCTGAGAAATAGAA
GAGCCCCCCTCTTCGACAGCCGCTACATCGCTGTTTTCATTTGTGAATAA
CTGGCACGCCACAATATTGGTGTCAAGAGGGGGGGGGCAGGATCGATGTG
CCTTGTCTGCCTTGTTTTAAAACGGACAATACTGCCATTGTTGCAGCGGT
AGTCACTTTATTCGCAACTGGGATGCCTCTCCCGGTGTTTGGTTTTCATC
TGTCGGACGCCTTGGGGAAAGGGTCCTGTGTGACCACGGGTTGGAGTACG
CGGCACAAATGCTGTAAGCGCTGATTTGAAGGGATGACAACCAAAATAGA
AGACGCCTTGACGCGGAATAATGAACTATCCAAAAAGCAATGAAAATCGA
CATGTTCCTATTTGGGACCTGTGTTCTTGCTCTGCATGCATGTAAGCAGC
AGAGAGGCCCAAGATGTTTGTGCCTGACCGGGCGGGGAACATGTCTATGT
TGAGCGAGAGATGTTCGCTCACACGGGACGTTGGTGTGGTATCGCGATGG
AGTTGTCTGGGGCGCGGGGCTCTGTGGGTAGGACCCGGTATGGCGCTGGC
CGTGCTGCCCAAGTACAAACACAACACAGCCTTGGTAAGGGAAGTTGACT
TCGTTTCCCGTTGTTGTCAGGAATCCGCACGTGCTGTCAATGGCATAGTT
CGCCGGAAGAAGAGGTAGCTGGTGGGACATGCAAGGAGGCAAGCGCTGTT
CAGATTTTGTTTTCTCCAGGCTGAGGACCAACGCATGCCATCGTTTTTGG
CAACGTGGCGCTCAACAAGCAGGTGGAATCTTCGTCTATTACAACCCGTA
ACGGGGCTATCCAGCGTGAGATGCAGGACGCTTACCGGAAGCTCATCTGC
GCAAACGTCGAGCGTAAGGTGCGTGTGTCTCTTGAGATGGTTGTAGCATC
GACAGCACTAGACGGCTGTCCCATGGAGAGACATCAGTCTCACAGCGGGG
CGAAGAAAAGTGGGGGGGTGTCAGACATCTTGGTGTGATGTTTTGTTTTC
GGTGGTATCGACGAAGGAGGCGTCTCTGGACAAGGAAAGGGACAACGGCT
CAAGCAATCACCAAGGGACTGAGGAACCCCCCCCCCCCCCCTCCCTCTCT
CCCACCGTACACGCCGTAACAGCTGACACTGCAAGACGTGGCTTCGTTCT
CGACCTTCCTGGTCGGGGTACGAGTGAGGCTTCACGAGAAAGGCTCGAAC
CTCCGTAGGCGCCACAGCGTCCTGTCCTCCTTGCTAAAGCACGCACCCCG
CGCACGCGTACAGCGGTAAGCCAGGGTTTTTGTTGCTATCGTTGTTGCTG
TTGTTGTTGTTACTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTT
GTTGTTGACGGTGGTGGTAAGTGGGCCTCAGGATCTTCCTTACGTGCTGC
GGTATTATGATGTTGGCCGATCTTACGGAGGACCGTTCGTGCTACTCTTG
TTGGTGCAGTAGTGGGTAGTTGTTGTTGTTGCTTGTTGCGTGCTGCAGTG
GTGTTGCCCAACCTCACTGAGGACCGTTGTTGCTACTATTGTTGGTGTAG
AAGCAGGGTTGTTATTTTGTTGTTGCTTGCGTGCTGCGGTATCATTGACC
GACCTTCCGAGGACCGTTGTTGTTGTTGTTATTGTTGTTGTTAGTGGTGG
AGGCTGATGTTGACGTTGGTACCGATCACGGTTGTTTTTTTCCATGCGCG
TGGCATTGGAGGAACGTCTTCCCTCGCTTCCGTCTTCTTGCTACGGTATA
TTGTTTTGTGGTCGGACAGCTGTCTTCGCCATAACCTGTGTTTGTGTGCT
ACAGTACGGGCCCGTCGAGAAATATTTTGTCAAGAAGCCGAGTCTCAAAT
TTTCATGAAACGGAAGAATGTTCAAGAAACACAGCTCAGCGTTGAATCCT
AACGAAATTCAACATAACAACCTGCGCTTGACAGCAGTGGCCATGAAAAA
AGAATCTGAGGCTTGACCCGATATTTTGACGTTTCGTATCTCCAGGGCCG
AGCTGGGGTGGTCTCTTACTTTTGTTGACCCTCTGTTTTGGATGTTCTGC
AGAATCTACTCGGACCTCGCTGCTGTGGAGGAGCAGGAATCCGCCCTTAC
CAAGGACGTCGACCTCTTCAATAAGCTGCAACAAGATTTGAAGGAATCCC
CGGCCTACAAGTGAGCGATGAAGAAAACAATTTTCTGAACAGTCGGCAAA
TGCATCCGGCAGTATGAGCGCATGTCTTGAAACGTTCAGGGAGCTCGATG
GGAGCAAGCATGCGGATCGTTGGTTTTGCTTCTACGAGATATTTCAGATT
TTTTCTAGCCATGTCAAGCTTCACCAGTTTCTTGCGGTTCGAGGAACGGG
TCGCGAGCCGGGATAGCTCGGTCTGTTGGAAGGGGTTGACCCAGTCATGG
TTCAAGAGGAACATTGTGAGCATCTTTGCCTGGCTGTGGGTGCAGACTCT
CTTCGCGAAACGTGGCACAAGTTACGCTTGACAAGTTACTGTAGGTGGTA
AATCCTGCCATATCGTTTTTCATCGGCGGGGTTGGACTGTTGACCGTCGA
AGGGTGGTTGGCGTGAGTGACTTCAGCACGTGCTACGGCTTGTGCAGACC
TGTTTTCCGAGCAATCAAGCAGGCGTACAGACGATGCCGTACACGCGAAG
TAGCAACTACGAGCTTTCCACGAGCCCGACTGTTGTTGTCTCTTGGTCTC
AATCGTCATTTCCCTCGTGCTGCTGTCATGATCACTTCGGTGATTTCTCC
GATATGAATCGTCGTTGTCTTGGCGAAATACGTGCACCATCACAGGGCGA
TGATGGAGTACGGCCAGTCGAGCGGTATGGTAAACGTGGACGGGACGATG
ATGCCGGATCCCACCAAACATCCGGAGCTGGAAGCAATGGTAAGAGCTGG
GACAGGGCGGAAGGTTGCGTACGTACGCATAGGCTTGTTGGATTGAGGAG
CGTCGAGAGCTTTGCGGGCTTGTTGACACTTGGTCCGGTGTGACACCGGC
TTTGAAAAAACTGCAAGTGTCGGGGCGCGTTTTAAACACCTTTTTTGATA
AAAACATGTCCGGCGGGAATCTACGGCGGCTACGACGTGTGTTGGACGAT
ATCCACGTGCCCAGCCTTCGGGCATGGACGCTTCAAGTACTTGTGAGATG
GCTTTAGCTATGGAGCAAGATGGCTTGTTCGTTTGAACAACAGATTTCGC
TAGGCGAGCGGTGGAGCGCGGGCAAGAAGTAAAATCGTCACGGGGGGAGT
GGAGAGAGAGGATGATGGGCGCCTGATAGAGGGTGCAATACGGCGGCGCG
AACGCACACAAGACGCAAGCAGCCCCGCCCCCCACGCGTCTGCTCCGTCG
TTAGGGGTGCGTCGTTTTTTCCCCGCCGTCCTGTTGGTCTTGCTGCTTTT
TTGCATACCTGTTGAATATGGACGATCTCCAGCATGGCAAACCTACATAC
CCCGCGCTGCTCTTCCGTTGACGAACCCCCATGGCAACACACGAGAAGGC
GTCCATGTCGGTGAAGGATATGCTGGCGGAGTTTAAGATGGAGGACAAGC
GTAACGAGGAGCAAGGCGGCGGAGGCCGCGGCGCTGGCTCCGTCGGGGGT
GACAACGGTTTCAGCCCCGTATTTTCGGCGGCAGCGGGGACTGGGGGACG
GTTAAGGAGCGGGGCCGGCGCTGGGGGGTTGGGAAAGGCGGGGGATGCGG
CGGCCCCGCAGAAAAACAAGAAGGGGAAGAAGGGAAAGAAAGATAGAAGA
CGGTAGTACAGCCGGTGAGTGGGTGATGCCCATGGTCGTGGCGATGCCCA
GTGTGTGTGGGTTTTAATACCGGTGCGTTTCTTCCGATAAGGGGGGCATC
ATGACTCTTAGGTTTGTGTCCGGCTTTTTCATGTGTGGGGACATTGTAAA
CTCTAGGGGTTGTGTCTAGCTTTTTATGTGCGTGTTGTGTGGTGGTAGTA
GTCTGCGCTCTCGCGGACGGGGGGCTCCGCCGAAGGGAAGACGGTCGTTC
ATGGGCGCATGTCTTCCATTTCGTGGTTGGTTTCCTGCCTTTTTACGCGT
GAGTTCTCGACTTCTCCCCGCACGCTCTATTATGTTTCTTTACCGCGAGT
CAACTTGTATAGTGACTGTGTACTGCTGTGAATGACGGGAGGGAGGGCGG
TACAATGGCCATCACGACTCATGACGCTCGAGTTATAGGCTGTCGACTCT
TGTGTCCGTACGAAGGCGTCGCGGAAGAAGTTTGTTGGTTCTTTGTGCTC
GGCGACGTAGCCGCTACAGGATTGGAGTGCGCCCGCTCCAAGGCGGATCT
CGGCACCAGGCCGCCACATCGCCTTTTGTATGGATGGCACGCTTCGAGCT
TCGAAGCTGAGTGGGCTTTTTTCGCGCGTGGGTTTGGTAAGTCTTGTCGC
TGGTGCCCGTTTTGCGGTTCTATTCAAGTGTCGGGGAATCTGTAGCGGGG
TGGCTATCAGTCAGCGGGTTGATTAACGCGACCTACTGCGGTCGTGCTTT
CTCACCGTACATCTACTCAGCAATGTTCATACTCGAGGTAGCTCTTGTTG
TTGGCTAGCAAGGAGAACCTGGCGAGGTATATCTGTTTGTGCCTGTGGAT
GGGGCGCTGCAGGTCTGGTCGTGTATGTACACGGGGAGGGTAAGGTAGAG
CGGGCAGCTCCCGGCGGTTCGTATTATCACAAGCACACAAGGTAGTTGTG
TAGCTCGATTTCGTAGAAACAGCGATTGCACCGTTAAGCGCGTTTGGTTC
CAGTATGACTACGAAATCTACGTGTTTCCATCTGATGTCACATGTGAAGT
CGTTGACCTTTGCTAGAGGGCACTACTGGGTCCATTCTCCATGCGTACGC
TCTGTCATTTTGCGAGGTGACGGCTCTCGATCATCTACAGTGACGAGGAT
GGGAATCGCTGCGCTGCTGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1560:2125..8944-

>mRNA_Ecto-sp13_S_contig1560.4166.1 ID=mRNA_Ecto-sp13_S_contig1560.4166.1|Name=mRNA_Ecto-sp13_S_contig1560.4166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1089bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1560:2125..8944- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTCACGTTCAAGGGACAACGGGCATGGCGCGAGAGAGTTTCGGGCC
CGAGCCCTCCCCGTCTAACTGGAAGCCAGACGACATTGGGGCAGCAGCAG
CAGCAGGAGGACTAGACCTGCACACGAAGACCGCCGAAGGACGTTTGTCC
GGAGAGCCAGTTTACGGATGGGGGGTACAGTCTGCTACGAAGCCTTCGGC
ACCGGTATCGACAGCACCTGACGCCCACGAGCAGCGGCGGCAACAGCGGC
AGCAGCGGCAAAGGCCTGCGGATACTGCTGGTTCGGGCTTCGGAGGGAGA
CCGAAAAACGTGGTACCACCTTCAATGGTGACGGGAGCCGCGATACCCGC
AGACGACCCGGTGGTTGTCAAGAGCTTGACATCACAGCAGGTGGAATCTT
CGTCTATTACAACCCGTAACGGGGCTATCCAGCGTGAGATGCAGGACGCT
TACCGGAAGCTCATCTGCGCAAACGTCGAGCGTAAGCTGACACTGCAAGA
CGTGGCTTCGTTCTCGACCTTCCTGGTCGGGGTACGAGTGAGGCTTCACG
AGAAAGGCTCGAACCTCCGTAGGCGCCACAGCGTCCTGTCCTCCTTGCTA
AAGCACGCACCCCGCGCACGCGTACAGCGAATCTACTCGGACCTCGCTGC
TGTGGAGGAGCAGGAATCCGCCCTTACCAAGGACGTCGACCTCTTCAATA
AGCTGCAACAAGATTTGAAGGAATCCCCGGCCTACAAGGCGATGATGGAG
TACGGCCAGTCGAGCGGTATGGTAAACGTGGACGGGACGATGATGCCGGA
TCCCACCAAACATCCGGAGCTGGAAGCAATGGCGTCCATGTCGGTGAAGG
ATATGCTGGCGGAGTTTAAGATGGAGGACAAGCGTAACGAGGAGCAAGGC
GGCGGAGGCCGCGGCGCTGGCTCCGTCGGGGGTGACAACGGTTTCAGCCC
CGTATTTTCGGCGGCAGCGGGGACTGGGGGACGGTTAAGGAGCGGGGCCG
GCGCTGGGGGGTTGGGAAAGGCGGGGGATGCGGCGGCCCCGCAGAAAAAC
AAGAAGGGGAAGAAGGGAAAGAAAGATAGAAGACGGTAG
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