prot_Ecto-sp13_S_contig15598.4161.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15598.4161.1
Unique Nameprot_Ecto-sp13_S_contig15598.4161.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15598.4161.1 vs. uniprot
Match: D7FYZ2_ECTSI (GBBH-like_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ2_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 3.260e-36
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0 
Query:    1 VTSTQVLANERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTVFPGDVDPTLKPVE 59
            V+STQVLANERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTVFPGDVDP LKPVE
Sbjct:   80 VSSTQVLANERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTVFPGDVDPGLKPVE 138
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BLAST of mRNA_Ecto-sp13_S_contig15598.4161.1 vs. uniprot
Match: A0A6H5KBM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM7_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 4.750e-31
Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 0 
Query:    1 VTSTQVLANERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTVFPGDVDPTLKPVEVT 61
            V+ST+VL +ERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRT+FPGDVDP LKPVE +
Sbjct:   78 VSSTEVLPSERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTLFPGDVDPGLKPVETS 138
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BLAST of mRNA_Ecto-sp13_S_contig15598.4161.1 vs. uniprot
Match: A0A651HVS6_9BACT (DUF971 domain-containing protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651HVS6_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 2.690e-6
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:   11 RQVEVLWDDGHNSYFDYTWLRVNCPSFL---HESGQRTVFPGDVDPTLKPVEVT 61
            R++ ++W DGH S F   +LRV CP        +G+R + PGDV P++ P+E+T
Sbjct:   18 RRLRIVWGDGHRSEFHPRFLRVACPCAACVDEMTGRRILRPGDVPPSIHPLEIT 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15598.4161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYZ2_ECTSI3.260e-3696.61GBBH-like_N domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KBM7_9PHAE4.750e-3186.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A651HVS6_9BACT2.690e-640.74DUF971 domain-containing protein n=1 Tax=Gemmatimo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038492GBBH-like, N-terminal domain superfamilyGENE3D3.30.2020.30coord: 1..62
e-value: 1.9E-8
score: 36.2
IPR010376Gamma-butyrobetaine hydroxylase-like, N-terminalPFAMPF06155DUF971coord: 8..61
e-value: 1.5E-9
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15598contigEcto-sp13_S_contig15598:3912..4097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15598.4161.1mRNA_Ecto-sp13_S_contig15598.4161.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15598 3912..4097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15598.4161.1 ID=prot_Ecto-sp13_S_contig15598.4161.1|Name=mRNA_Ecto-sp13_S_contig15598.4161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
VTSTQVLANERQVEVLWDDGHNSYFDYTWLRVNCPSFLHESGQRTVFPGD
VDPTLKPVEVTN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038492GBBH-like_N_sf
IPR010376GBH-like_N