mRNA_Ecto-sp13_S_contig15595.4159.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig15595.4159.1
Unique Name	mRNA_Ecto-sp13_S_contig15595.4159.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A6H5J907_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J907_9PHAE)

HSP 1 Score: 989 bits (2558), Expect = 0.000e+0
Identity = 522/588 (88.78%), Postives = 529/588 (89.97%), Query Frame = 2

Query:    2 YQERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVELERLARTLGAPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYSGPAV 1765
            YQERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRG+ VLFFSARQQQEQLNREAREERDIAEGGLGSG PA DAYDSED     XXDFEADTEGDG                           GATSSAG RGSGT VGKGDKSL+VLSRLEMCVELERLARTLG PDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLV+SDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLP+LPGDVRDTAGN MLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLA K                 AVAS EAASL+QPEN+DLMAEVLEKRAAVAAREAELGLTVGAGG+GGK TKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYSGPAV
Sbjct:  134 YQERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGITVLFFSARQQQEQLNREAREERDIAEGGLGSGPPASDAYDSEDGEDDTXXDFEADTEGDGEEEEEVALSDAPSAAGAAKKGHAGGGEGATSSAGRRGSGTDVGKGDKSLQVLSRLEMCVELERLARTLGTPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDVRDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLKQPENIDLMAEVLEKRAAVAAREAELGLTVGAGGRGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYSGPAV 721

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A835YPB7_9STRA (Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB7_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 7.510e-139
Identity = 316/640 (49.38%), Postives = 386/640 (60.31%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKG-------DKS-----------LRVLSRLEMCVELERLARTLGAPDPSRNG----GRACVGMVGFPNVGKSSLINVMVGATPLSHGGV-RVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTML----------------SPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADL-ESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASA-----GGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRR--GKK---------RDGFVRNTMPHHQTYSGP 1759
            E+ +F+EWRR IA  EE+   +KVTPFEKN+EVWRQLWRV+E+SDLV Q+VDARNPLFYYS DL AYARE+ PPKP +++VNK+DYL+ AQ+REWA HF  +G   LFFSAR  Q +LNREAR  R +        A A DA   +   XXXXX          XXXXXXXXXXXXXXXXXXX        GA+ +AG  GS              D+S            RVLSR E+   +E LAR+LGA   +R+     GRACVGMVG+PNVGKSS+IN + GATP SHG   RVSVGATPGKTKHFQTL +S SL+LCDCPGLVFPSFVSS AEMICAGVLPIMQMR+ + P+AL+ARR+PRHILE+TYTI                                  +  ++L ++C++RGL+R   LG+ D+PRAAR +LKD+T+G LLFCHPP DL ++ A+  FL+ET++T L + +LA KL  Q  KA   +SA     G   V   EA          L A +  +   + AREA       A   G  PTK E G  RWGKK +K  +  PY N   E  A+    GA V  GGKK  +   KK         + GFVR  +PHH  Y GP
Sbjct:  136 EKTAFIEWRREIARLEEEKAGLKVTPFEKNIEVWRQLWRVLEKSDLVVQIVDARNPLFYYSRDLLAYARELDPPKPVIILVNKSDYLTAAQRREWAAHFMRQGWQGLFFSARAAQVKLNREARIARGLEM------ATADDAAAEDADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAPELQDGASETAGSGGSXXXXXXXXXXXXXXDESNSEFEREVARRARVLSREELLHVIEHLARSLGAASAARSAERHHGRACVGMVGYPNVGKSSVINALAGATPFSHGATARVSVGATPGKTKHFQTLALSPSLLLCDCPGLVFPSFVSSAAEMICAGVLPIMQMRDALAPIALVARRVPRHILELTYTIXXXXXXXXXXXXXXXXXXXXXXXXXXXALATRPPTATEVLTAFCESRGLYRPGGLGDYDLPRAARMLLKDYTEGTLLFCHPPPDLSDAAAVAAFLRETERTHLSSGRLAAKLAEQQRKAYGASSAQQQGGGEGGVVDGEA----------LTARLKARADEIRAREA-------AAMDG--PTKVEQGFKRWGKKSKKYRDPTPYAN--WEGGAAAAARGASVQRGGKKPNKKLAKKAAAVVGEGEQQGFVRAMLPHHAGYEGP 748

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A6G0XKI7_9STRA (G domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKI7_9STRA)

HSP 1 Score: 320 bits (820), Expect = 3.380e-94
Identity = 231/585 (39.49%), Postives = 308/585 (52.65%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVELERLARTLGAPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPI-LPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRD-GFVRNTMPHHQTY 1750
            ER+SFL WRR IA  E+ + D  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+ AQ+  WA +F  + +  +FFSA++ QE L+ E ++            + A    + ED XXX   + E  TE +                              T    C+              VLSR ++   +   A+ + A    R   +  V  GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTL++SD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P+   G   D      +    +LE Y +ARG F A   G  D  RAAR IL+D+ +G+LL+ HPP  +         K +D  A    +LA   V             G+ V   EA  ++  +  DL+                        G G KP   +  L R GKK RK  +K+PY + D   +A    V         +G++  +RD  F R T+PHH TY
Sbjct:  124 ERESFLNWRRDIAMLEQASEDRDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSIDLERYVKEVDEKKQVMLIVNKSDYLTPAQRIAWADYFASQSIDFVFFSAKEAQELLDAEYKK-----------ASKAIILEEDEDEXXXDDGEIEDYTEEE----------------------KPTSQPSKTERPECK--------------VLSREDLLAYMAERAKEVLARVGVRAEDKGLVKFGMVGFPNVGKSSAINALLGASNFAHNAQRVAVGATPGKTKHFQTLILSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKIPVPKTGKYTDP-----VDVYTVLEVYARARG-FAATGKGGPDTSRAARAILRDYVNGKLLYSHPPPGV---------KPSDP-AFDPLELAKDFV-------------GIDVTELEA-EMEAAQGFDLV------------------------GIGSKPIVSKR-LKRHGKKGRKARDKNPYEDLDATASAMTAHV--------SRGKKADRRDTAFTRVTLPHHATY 598

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A1V9ZAV8_9STRA (Large subunit GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAV8_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.290e-93
Identity = 245/584 (41.95%), Postives = 321/584 (54.97%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVELERLARTLGAPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYS 1753
            ER+SFL+WRR IA  E  + D +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+  Q+  WA +FK  G+  +FFSA++ Q +L+ E +  +++                             +D EG+  XXXXXXXXXXXXXXXXX           T  A C               VL+R E+   L   A  + A    R   +  V  GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT+++SD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   + T     +    LLE Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP  +          E  KT     K+A  L+  LS  E  A+               +    D +   +E +AA + R                       L + GKK RK  +K+PY   D++ AA+   + A V+    +G++   +  FVR TMPHH TY+
Sbjct:  124 ERQSFLDWRRDIAMLEAASEDREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSVDLERYVKEVDEAKDVMLIVNKSDYLTPEQRIIWADYFKANGIDFVFFSAKEAQAKLDAEYKASKEL---------------------------LLSDDEGE-EXXXXXXXXXXXXXXXXXEKDAGEAAPAPTERADCV--------------VLTREELLAYLNGRAERVTARVGLRAEDKGLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKVPF-PNSGKYT---DPVDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVAPTTPAFDPLELAKTFATADKVA--LLEPLSDEEGDAA---------------KAPGFDPVG--VESKAAASKR-----------------------LKKHGKKGRKARDKNPY--EDMDGAAATASM-AHVS----RGKKAMNQKDFVRVTMPHHATYT 611

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A4D9D3A0_9STRA (G domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3A0_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.150e-92
Identity = 268/614 (43.65%), Postives = 341/614 (55.54%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDM-KVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLR----------VLSRLEMCVELERLARTLG------APDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGD-------VRDTAGNTM--LSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKET-DKTALKTTKLATKLV-LQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGK----PTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK--GRR--GKKRDGFVRNTMPHH 1741
            E+ SFLEWRR IA  EE +G+  +VTPFEKNLEVWRQLWRV+ERS ++ Q+VDAR+PLFYYS DL AYA E+ P +  +V+VNKADYL+ AQ+ EWA +F+ RG    FFSAR+ QE L  +AREER              +  D E XXXXXXX          XXXXXXXXXXXXXXXXXXXXX       A     C        +G+K             +L+R E+   L+ LA  +G      A +     G+A VGMVGFPNVGKSS+INV++G TPL H  VRV+V +TPGKTKHFQTL +    MLCDCPGLVFPSFV++TA+M+CAGVLPI Q+R  M P+ L+ RR+P  +L   Y +K     G+        +++ G++    + +  L   C ARG +  +  G +D+ RAAR +L+D+ +GRL++ HPP  L +E    F   T  +   K   L+  L  L L +   K   GG A                                    LTVG G + GK    PTK      RWGKK +K+ NK PY   D E     G VG R  GGG +  GR+  G    GF R TMPH+
Sbjct:  132 EKASFLEWRREIAQLEETSGERARVTPFEKNLEVWRQLWRVLERSHVIVQIVDARDPLFYYSEDLHAYAAEMHPARERLVLVNKADYLTPAQRGEWATYFQKRGWNHAFFSARRAQELLTLQAREER----------LKELEGRDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAGGPSAPVKVSCS-------RGEKEEEPESRTTIFPPILTRTELIARLKGLAARVGGAFAAAALEAGHAAGKATVGMVGFPNVGKSSVINVLMGVTPLEHDRVRVAVSSTPGKTKHFQTLPLDPETMLCDCPGLVFPSFVATTADMVCAGVLPINQLREHMAPVELLCRRLPGPLLRRAYGLKERAKDGEETPAWASAKESGGSSSGCETARTFLGDLCGARGYW-TQGSGVADVNRAARMVLRDYVEGRLVYSHPPPGLTAEEGRVFEAATRGRGGGKGPALSEGLRRLALGEGRDKEEGGGTAXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXELTVGEGSRSGKVRVRPTK------RWGKKGKKLRNKTPY--EDTE-----GGVGGRAPGGGARVLGRKVVGGGEGGFTRVTMPHY 713

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A024TX60_9STRA (CP-type G domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX60_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.260e-92
Identity = 235/586 (40.10%), Postives = 316/586 (53.92%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVELERLARTLGAPDPSR--NGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMG--LLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYS 1753
            ER+SFL WRR IA  E  +G  +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+D+L+ AQ+  WA +F  + V  +FFSA++ QE L+ E ++     E              SED   XXXX    D   +                             AT++         V +     +VL+RL++   +ER A+ +      R  + GR   GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTL +SD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P+ P   +    N  ++   +LE Y +ARG F        D  RAAR +L+D+ +G+LL+CHPP  ++   + RF                   L+L+K       GGV                    + L  R     + A+  L        G  +KR +   L + GKK RK  +K+PY   D++ AA+   V A V+ G K  RR K    F R T+PHH TY+
Sbjct:  125 ERESFLNWRRDIAILEAADGAREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSLDLERYVKEVDANKQVMLIVNKSDFLTAAQRLAWADYFASQNVDFVFFSAKEAQELLDAEYKKSTMTLEL-------------SEDEESXXXXXXXXDENAEEVTPAIT----------------------ATTAVPTHA----VDEERADCKVLTRLDLLEYMERRAKAVVGKVGLRAEDRGRVKFGMVGFPNVGKSSAINALLGASNFAHHAQRVAVGATPGKTKHFQTLALSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPIAQLRDHVPPCELVARRIPRVVFEETYGIKVPV-PNTGKY---NDPVNVYTVLEVYARARG-FTTTGKSGPDTSRAARVLLRDYVNGKLLYCHPPPSVDVNDL-RFNP-----------------LELAK-----DIGGVV-------------------DELLARDDEDGKPAKFDLA-------GADSKRVLSKRLKKHGKKGRKGRDKNPY--EDLDNAAAA--VTAHVSRGKKIDRREKA---FTRVTLPHHATYT 610

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A1W0A241_9STRA (Large subunit GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A241_9STRA)

HSP 1 Score: 313 bits (802), Expect = 2.290e-91
Identity = 241/594 (40.57%), Postives = 318/594 (53.54%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCV----ELERLARTLGAPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLE--------SEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYS 1753
            ER+SFL WRR IA  E+   + +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+  Q+  WA +FK   +  +FFSA++ QE+L+ E +  RDI               D ED XXXXXX            XXXXXXXX                  ++    C               VL+R E+        +++ + +G     +  G    GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT+++SD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   R    N  +    LLE Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP  +         +E   +F+ + D            L+  LS  E +                ++P N DL                     VG   K G  +KR   L R G+K RK  +++PY   D++  AS   V A ++    +G++   +  FVR TMPHH TY+
Sbjct:  124 ERESFLNWRRDIAMLEQATEEREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSIDLERYVKEVDAAKDVMLIVNKSDYLTPEQRVMWADYFKANKIDFVFFSAKEAQEKLDAEYKASRDII------------VSDEEDNXXXXXXXXXX--------XXXXXXXXNEIVSKEAPKVVEEIKPASSEREDCI--------------VLTREELLEYFDGRADQVVKRVGLRADDK--GLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVPF-PNSGRY---NDPVDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVSPSEPAFDPNELAKKFIVKEDDPV-------NALLQPLSDEEDE----------------EKPTNFDL---------------------VGVDSKTG-ASKR---LKRHGRKGRKARDRNPY--EDIDGTAST--VTAHIS----RGKKQMNQKDFVRVTMPHHTTYT 620

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BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A485KVN8_9STRA (Aste57867_12475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVN8_9STRA)

HSP 1 Score: 313 bits (801), Expect = 2.340e-91
Identity = 240/586 (40.96%), Postives = 314/586 (53.58%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVELERLARTLGAPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQ--PENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYS 1753
            ER+SFL WRR +A  E+ + D  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY STDLE Y +E+   K  +++VNK+D+L+ AQ+  WA +F    +  +FFSA++ QE L+ E ++                              + E   + + XXXXXXXXXXXXXX                  A C+              VLSR ++   +E  ++ + A    R   +  +  GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTLV+SD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P+ P   +    N  +    +LE Y +ARG F     G  D  RAARQ+L+D+ +G+LL+CHPP  +                  TT     L L      AK+  G  A+            P   DL   V   + AV+ R                       L R GKK RK  +K+PY   D++ AA+   V A V+ G K  RR  K   F R T PHH TY+
Sbjct:  124 ERESFLSWRRDLALLEQSSEDRDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSTDLEKYVKEVDEKKEVMLIVNKSDFLTPAQRVAWADYFASEKIDYVFFSAKEAQELLDAEYKQAN---------------------------VNVELSEDEEXXXXXXXXXXXXXXXPKDVAVEEKQPAAADVERADCK--------------VLSREDLLEYMENRSKDVLARVGLRAEDKGLIKFGMVGFPNVGKSSAINALLGASNYAHHAQRVAVGATPGKTKHFQTLVLSDAIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVPV-PNTGKY---NDDVDVYSVLEVYARARG-FTTTGKGGPDTSRAARQLLRDYVNGKLLYCHPPPGVSP----------------TTAAFNPLEL------AKSFVGDAAMLLVLGGEEDDDGPAGFDLAGAV--NKPAVSKR-----------------------LKRHGKKGRKARDKNPY--EDLDAAAAQ--VTAHVSRGKKADRRDAK---FTRVTHPHHLTYT 609

[Close]

BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: W4GNA2_9STRA (G domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNA2_9STRA)

HSP 1 Score: 307 bits (786), Expect = 3.180e-89
Identity = 239/586 (40.78%), Postives = 310/586 (52.90%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVELERLARTLGAPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMG--LLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYS 1753
            ER+SFL WRR IA  E      +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+D+L+ AQ+  WA +FK + V  +FFSA++ QE L+ E ++    A   LGS +      D E XXXXXXX  E                                   A     C+              VL+R ++   +E  A+ + A    R+  R  V  GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTL +SD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P+ P   +    N  ++   +LE Y +ARG F        D  RAAR +L+D+  G+LL+CHPP  ++              A    +LA   +            GG A                   EVL       A E E G   G     G  +KR +   L R GKK     +K+PY   D++ AA+   V A V+ G K  RR K    F R T+PHH TY+
Sbjct:  125 ERESFLSWRRDIALLEAAAEAREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSMDLERYVKEVDENKQVMLIVNKSDFLTPAQRVAWADYFKDQAVDFVFFSAKEAQELLDAEYKQ----ANVALGSSS------DDEXXXXXXXXXVEG-------------------GEVEEVVAVPNAPVAALEREDCK--------------VLTREDLLEYMETRAKAVFAKVGLRSEDRGLVKFGMVGFPNVGKSSAINALLGASNFAHHAQRVAVGATPGKTKHFQTLALSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPIAQLRDHVPPCELVARRIPRVVFEKTYGIKVPV-PNTGKY---NDPVNVYSVLEVYARARG-FTTTGKSGPDTSRAARVLLRDYVMGKLLYCHPPPTVD----------VADAAFNPLELAKDFI------------GGAA-------------------EVL------LAHEDEEGKPTGFD-LAGAESKRVLSKRLKRHGKKXXXXXDKNPY--EDMDNAANA--VTAHVSRGKKIDRREKA---FTRVTLPHHVTYN 607

[Close]

BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Match: A0A067CCU5_SAPPC (G domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCU5_SAPPC)

HSP 1 Score: 306 bits (784), Expect = 7.540e-89
Identity = 232/586 (39.59%), Postives = 314/586 (53.58%), Query Frame = 2

Query:    8 ERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNREAREERDIAEGGLGSGAPAPDAYDSEDXXXXXXXDFEADTEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSSAGCRGSGTGVGKGDKSLRVLSRLEMCVEL----ERLARTLGAPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEAASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYS 1753
            ER+SFL WRR IA  E  + +  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  ++++NK+DYL+  Q+  WA +FK   +  +FFSA++ QE+L+ E +  +D +                            +D EG+   XXXXXXXXXXXXX             +  +              +   VL+R E+   L    +++   +G     +  G    GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT+++SD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   +    N  +    LL+ Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP               D             V++L+K   K +A   AVA  E  S ++ ++              AA+       VG   K    T     L + GKK RK  +K+PY + D   + ++  +         +G++   +  FVR TMPHH TY+
Sbjct:  124 ERESFLNWRRDIAMLEAASEERDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSVDLERYVKEVNSAKDCMLIINKSDYLTPEQRLIWADYFKANAIDFVFFSAKEAQEKLDAEYKASKDFS---------------------------LSDDEGELDDXXXXXXXXXXXXXTKPAPIVAETPKQSVPAE------------REDCVVLTREELLEYLSGRADKVVERVGLRADDK--GLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKIPF-PNSGKY---NDPVDVYTLLDVYARARG-FATAGKGGPDQSRAARVLLRDYVIGRLLYCHPPPGTSPRE-----PAFD-------------VMELAK---KFAASEDAVARLEPLSDEEGDD--------------AAKTPGFD-PVGIENK----TAASKRLKKHGKKGRKARDKNPYEDLDGVASTTMAHI--------SRGKKAMNQKDFVRVTMPHHVTYT 615

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15595.4159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J907_9PHAE	0.000e+0	88.78	G domain-containing protein n=2 Tax=Ectocarpus Tax...	[more]
A0A835YPB7_9STRA	7.510e-139	49.38	Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus T...	[more]
A0A6G0XKI7_9STRA	3.380e-94	39.49	G domain-containing protein n=1 Tax=Aphanomyces eu...	[more]
A0A1V9ZAV8_9STRA	1.290e-93	41.95	Large subunit GTPase 1 n=1 Tax=Achlya hypogyna Tax...	[more]
A0A4D9D3A0_9STRA	1.150e-92	43.65	G domain-containing protein n=2 Tax=Nannochloropsi...	[more]
A0A024TX60_9STRA	1.260e-92	40.10	CP-type G domain-containing protein n=1 Tax=Aphano...	[more]
A0A1W0A241_9STRA	2.290e-91	40.57	Large subunit GTPase 1 n=1 Tax=Thraustotheca clava...	[more]
A0A485KVN8_9STRA	2.340e-91	40.96	Aste57867_12475 protein n=1 Tax=Aphanomyces stella...	[more]
W4GNA2_9STRA	3.180e-89	40.78	G domain-containing protein n=10 Tax=Aphanomyces a...	[more]
A0A067CCU5_SAPPC	7.540e-89	39.59	G domain-containing protein n=2 Tax=Saprolegnia Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15595	contig	Ecto-sp13_S_contig15595:2..4054 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	899.0
Seed ortholog evalue	1.1e-258
Seed eggNOG ortholog	2880.D7G7R6
Model size	2934
KEGG ko	ko:K14539
KEGG Pathway	ko03008,map03008
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000054,GO:0000166,GO:0001882,GO:0001883,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006405,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009790,GO:0009791,GO:0009793,GO:0009966,GO:0009987,GO:0010154,GO:0010467,GO:0010646,GO:0010817,GO:0012505,GO:0015030,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016072,GO:0016462,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022414,GO:0022613,GO:0023051,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0033036,GO:0033750,GO:0034470,GO:0034613,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042886,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045184,GO:0046483,GO:0046626,GO:0046907,GO:0048316,GO:0048366,GO:0048367,GO:0048518,GO:0048583,GO:0048608,GO:0048731,GO:0048825,GO:0048827,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051049,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:0097367,GO:0099402,GO:1900076,GO:1901265,GO:1901360,GO:1901363,GO:2000012
Exons	4
EggNOG free text desc.	Large subunit GTPase 1
EggNOG OGs	COG1161@1,KOG1424@2759
Ec32 ortholog description	Lsg1, cytoplasmic GTPase involved in the ribosome assembly
Ec32 ortholog	Ec-06_000630.1
Cds size	1698
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03009

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15595.4159.1	prot_Ecto-sp13_S_contig15595.4159.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig15595 506..2888 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462826.732575-UTR-Ecto-sp13_S_contig15595:1..49	1681462826.732575-UTR-Ecto-sp13_S_contig15595:1..49	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig15595 2..49 +
1681462826.7424014-UTR-Ecto-sp13_S_contig15595:483..505	1681462826.7424014-UTR-Ecto-sp13_S_contig15595:483..505	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig15595 484..505 +
1681462826.7747943-UTR-Ecto-sp13_S_contig15595:2888..4054	1681462826.7747943-UTR-Ecto-sp13_S_contig15595:2888..4054	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig15595 2889..4054 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462826.7506545-CDS-Ecto-sp13_S_contig15595:505..1380	1681462826.7506545-CDS-Ecto-sp13_S_contig15595:505..1380	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig15595 506..1380 +
1681462826.7587867-CDS-Ecto-sp13_S_contig15595:1538..1875	1681462826.7587867-CDS-Ecto-sp13_S_contig15595:1538..1875	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig15595 1539..1875 +
1681462826.7668097-CDS-Ecto-sp13_S_contig15595:2402..2888	1681462826.7668097-CDS-Ecto-sp13_S_contig15595:2402..2888	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig15595 2403..2888 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig15595:2..4054+
coding sequence from alignment at Ecto-sp13_S_contig15595:2..4054+

protein sequence of mRNA_Ecto-sp13_S_contig15595.4159.1

>prot_Ecto-sp13_S_contig15595.4159.1 ID=prot_Ecto-sp13_S_contig15595.4159.1|Name=mRNA_Ecto-sp13_S_contig15595.4159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=566bp
MKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREI
VPPKPTVVVVNKADYLSRAQQREWARHFKGRGVAVLFFSARQQQEQLNRE
AREERDIAEGGLGSGAPAPDAYDSEDSEDDTDDDFEADTEGDGEEEEEVA
RSDASSAAGAAKKGHAGGGEGATSSAGCRGSGTGVGKGDKSLRVLSRLEM
CVELERLARTLGAPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSH
GGVRVSVGATPGKTKHFQTLVISDSLMLCDCPGLVFPSFVSSTAEMICAG
VLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPILPGDVRDTAGNTML
SPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPAD
LESEAITRFLKETDKTALKTTKLATKLVLQLSKAEAKASAGGVAVASTEA
ASLQQPENLDLMAEVLEKRAAVAAREAELGLTVGAGGKGGKPTKREMGLL
RWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFV
RNTMPHHQTYSGPAV*

mRNA from alignment at Ecto-sp13_S_contig15595:2..4054+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig15595.4159.1 ID=mRNA_Ecto-sp13_S_contig15595.4159.1|Name=mRNA_Ecto-sp13_S_contig15595.4159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15595:2..4054+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTACCAGGAGAGGAAGTCGTTTCTCGAGTGGCGCAGAGGAATTGCCAAGT
GAGCACATACGGCAAGCAATCTCTTGTCCAGTCTAGCAGAATTTCTCATC
GTGATGTCTTTGTTGTGTCGGGGGGTTGCAGTGGATGCTATTGGTGTGAA
CACATTGTGCGCTTGTTCGCCTTAGGAAAGCATGTTTCGCCTCTATGTCG
GCGCTACAGCAGGAGCGACCGTCAAGTTTGTACGGACGGGGCCCCTACGA
TGGACGCAGGTCTCGCTTTGCTCTATTCCACTTTTCAATTGCCGAACACA
GCGCGTGCACTGATGTCCGTGAACATGCTACCTGCTGCGGTACACATAGA
ATGGGTTACCTTGATATATTTGAATCTACCGCGGCATGTTTGGGAGTTGT
GTGTCGCACGCCTCCGACGAAGTGCACACGTCATTGATTTCGTTCCTCCA
TCGCCCGACGCTACATCCACGCTCCGTTGCAGCGCCGAGGAGAAGAACGG
TGACATGAAGGTCACGCCATTCGAGAAGAACTTGGAGGTGTGGCGACAGC
TGTGGCGCGTCATCGAACGGAGCGACCTCGTCTGCCAGCTGGTCGATGCC
CGCAACCCGCTCTTCTACTACTCCACCGATCTCGAGGCCTACGCGAGGGA
GATCGTGCCACCGAAGCCCACCGTGGTTGTGGTGAACAAGGCCGACTACC
TGAGCCGAGCGCAGCAGAGGGAGTGGGCGCGGCACTTCAAGGGGCGAGGG
GTCGCGGTGCTGTTCTTCTCGGCCCGACAGCAGCAAGAGCAGCTCAACCG
GGAGGCGAGAGAAGAGAGGGATATTGCTGAGGGTGGACTTGGCTCCGGTG
CTCCTGCCCCGGATGCCTATGACTCCGAGGACAGCGAGGACGACACTGAT
GACGATTTTGAGGCGGACACAGAGGGGGATGGGGAAGAGGAGGAGGAAGT
TGCGCGATCGGATGCGTCATCCGCTGCAGGGGCGGCGAAGAAAGGCCATG
CTGGCGGGGGGGAAGGCGCGACTTCTTCGGCGGGGTGCCGAGGGAGCGGG
ACCGGCGTAGGCAAGGGGGATAAGTCACTGCGGGTGCTGAGCAGACTTGA
AATGTGCGTCGAGCTCGAGCGGCTTGCGAGGACTCTTGGTGCGCCGGACC
CTTCGCGAAACGGCGGGCGTGCCTGCGTCGGAATGGTCGGGTTCCCCAAC
GTGGGGAAGAGCAGCCTGATCAACGTCATGGTCGGGGCGACGCCGCTGTC
GCACGGTGGCGTGCGGGTCAGCGTCGGCGCCACCCCGGGCAAGACCAAGC
ACTTTCAGACGTTGGTAATCAGCGATAGCCTCATGCTGTGCGATTGTCCA
GGTCTAGTGTTTCCAAGTTTCGTTAGCAGGTGAGCTCAGGCAGGTTGATC
GCCCGGCAAGTACGAGTAGGCGTTCACAGTAGCACCCTTGTCGTGTTCAT
TTTATGATGGAGACCCGCTGCCCCCGTTGACCCACCTTTCTTTTCCCCAT
GCGTTGGTTTCCTCGATCGGTGGCAACGCTCAAACAGCACGGCCGAAATG
ATTTGTGCTGGAGTGTTGCCCATCATGCAGATGCGGAACGTCATGCCCCC
CATGGCCCTCATCGCTCGACGAATACCCCGACACATCCTCGAGATCACCT
ACACGATCAAGCTCCCGATCCTCCCGGGGGACGTCAGGGATACCGCGGGA
AACACCATGCTCTCGCCGCAGCAGCTCCTAGAGTCGTATTGCCAAGCAAG
AGGACTGTTCCGCGCGCGCGCCCTCGGGGAGTCAGACATGCCACGCGCGG
CGAGGCAGATCCTCAAGGACTTCACAGATGGACGGCTTTTATTTTGCCAT
CCGCCCGCCGACCTGGAGTCAGAGGTGAGCTACCTCGGTGTGTGCGCCTC
GCGCGTTGACCCCCAAGTGTTAGAAATATGCTTGAATGATTTTTTTGCCC
CGGGTTGTTTTGAGACACATTGGTGGCCGCACATGACCGCATGCTCGAGC
GTGGTGTAAACTGCGGCGTGCGCGTGGCCCCTTTTGAAGGGCATGTGGGA
CTCACCCTGCCACGCCAATCCCGTCTTGGTTGTACCTAAATTATAATAGC
TGCTGCCGACGACGGTTCGTCGCTCCCATCACCAACTATTTTGCCGTGCG
CACTTTTTCGCGTGCAAATGTGTCTGGTGCATTTACATCTGTAAATTTAT
GTGCTGGCCTTTCGTGTGCCAACTTTGCGCGCGCCTCCATTCTGGGTACC
CACCCTGCCTAATAGTGAATGGGAAAATGGAGCATCGCCATAATAGAGTC
TGGCCCTTTTTTGCCTATTTATGTTCTTGCTTTCTTACCAAATATTTAGT
TGCTCGCGTTGCTCCGATATGCCATGACGTTCTGTGCGTGAGAAAACGCA
GGCCATCACCCGGTTCCTCAAGGAGACCGACAAGACGGCTCTCAAAACCA
CCAAGCTCGCCACGAAGCTCGTGTTGCAGCTGAGCAAGGCCGAGGCAAAG
GCGAGCGCGGGAGGCGTGGCCGTCGCGTCTACCGAAGCAGCGTCTCTCCA
GCAGCCAGAAAACCTTGACCTCATGGCAGAGGTCCTTGAGAAGAGGGCGG
CGGTGGCGGCGCGCGAAGCCGAGCTTGGTCTCACGGTCGGCGCGGGTGGC
AAGGGCGGGAAGCCAACCAAGAGGGAGATGGGACTCCTACGGTGGGGCAA
GAAAGACCGCAAGGTTGGCAATAAGGACCCGTACGGCAACCCCGACGTGG
AGACCGCGGCGTCGCTCGGACCGGTAGGGGCGAGGGTAGCCGGGGGGGGC
AAGAAGGGGCGCAGGGGCAAGAAGAGGGACGGCTTTGTCCGGAATACGAT
GCCGCACCACCAGACGTACTCCGGGCCTGCTGTATGACTGACGCATATTT
GACCCATGCGCACGGAGTGGTGCACAGAGGCCTTTTGTCTGTTCGTTGGA
TATAGGCTCGTGAGGGAGTATACTTCTCCTGGTGAGAGATTCAGCCCCAA
TTTGTCGGTGTGCCCATCTTCGTCTGTAGTTGGTTGTGGTTTTTTGCTTC
TCGTTGGTATATACGTCGTACAGAGTGCTGATGTGCCCGGACGTTTGATA
TTACAGGTGTAGGACATTGCTTACAGTTCGTACTACACAACCCGGTCGCC
CCGGGGGTCTAGTGGGTACCCTCGCAGCCCACTTAAGATCAGGTCGTGGG
TCCGAGTCCCAGCATGTTGAGTTTTGTTCTCACCTAATAAATCCTGGTTT
AGGTTGGAAGCGACGCACTGCAAAGCTCGTTGTTGGTAAACTTGATCGAC
TTCATAGGTCGCGAGGGAAGGGATTGCTGTACCCTTCTCGCGATAAAACC
ATCCCAGGCAGGAACCGCAGGAGGGGGTCCAGTCCCCCCCTCCTTTTTGA
CCCCGGTTGGGTTGTCTCGCTGTTAGAAGTGGAGGATGGGGGCCAGAGGG
GCAGACGACAGAGTCCAATAATGGGAGGAAAAAACAAATACTATTACAGT
GTTGATAGGTACGCGGAGAGCTACTCGTAACAAAAAGAGCCGAAGGGTGG
CCCCGTTACCCCTGAGTAGGACAGGCGTTGTTGGCTCACGAGTGAATTTT
GCTCTGCTGTATTGCAGGGTAGTCTTGCGGCCGCTAAATAGGCAAGACTC
GGGCCGAGAGGACGCTTTTGGTGTGCGAGGGCGAGGGTCAATCGTGCAGT
GAGGAGATCATGCGTTGCTCGTGGGCGATCATGGCGAGCATAAATGTTGC
TCAGGAGGCTCGACTTTAACGCGTACATGTGTGAAGACAACAACAAGAAC
ATGTGTCTCGACTTAAATCTTTTTGCCGGTGAATACAGGGTCTGTGTCGG
CGTTAGTTCTTAGGCCGACGGAATACGCACCCATCCGTCGTTCTGCGTGT
TTTGGGGGCTACAAGAGTGAGCTTGATCAGACATGATACGCAGTAGGTGT
GTTTTTGTTTGTTAGAGGCAAAACCATCTTCGCCCCCTCTCCTCTGTGTG
TGTTTTTATTATTTGCATCGCGTGTTTATGCAGGTGCTACACCGATATCC
GCC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15595:2..4054+

>mRNA_Ecto-sp13_S_contig15595.4159.1 ID=mRNA_Ecto-sp13_S_contig15595.4159.1|Name=mRNA_Ecto-sp13_S_contig15595.4159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1698bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15595:2..4054+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGTCACGCCATTCGAGAAGAACTTGGAGGTGTGGCGACAGCTGTG
GCGCGTCATCGAACGGAGCGACCTCGTCTGCCAGCTGGTCGATGCCCGCA
ACCCGCTCTTCTACTACTCCACCGATCTCGAGGCCTACGCGAGGGAGATC
GTGCCACCGAAGCCCACCGTGGTTGTGGTGAACAAGGCCGACTACCTGAG
CCGAGCGCAGCAGAGGGAGTGGGCGCGGCACTTCAAGGGGCGAGGGGTCG
CGGTGCTGTTCTTCTCGGCCCGACAGCAGCAAGAGCAGCTCAACCGGGAG
GCGAGAGAAGAGAGGGATATTGCTGAGGGTGGACTTGGCTCCGGTGCTCC
TGCCCCGGATGCCTATGACTCCGAGGACAGCGAGGACGACACTGATGACG
ATTTTGAGGCGGACACAGAGGGGGATGGGGAAGAGGAGGAGGAAGTTGCG
CGATCGGATGCGTCATCCGCTGCAGGGGCGGCGAAGAAAGGCCATGCTGG
CGGGGGGGAAGGCGCGACTTCTTCGGCGGGGTGCCGAGGGAGCGGGACCG
GCGTAGGCAAGGGGGATAAGTCACTGCGGGTGCTGAGCAGACTTGAAATG
TGCGTCGAGCTCGAGCGGCTTGCGAGGACTCTTGGTGCGCCGGACCCTTC
GCGAAACGGCGGGCGTGCCTGCGTCGGAATGGTCGGGTTCCCCAACGTGG
GGAAGAGCAGCCTGATCAACGTCATGGTCGGGGCGACGCCGCTGTCGCAC
GGTGGCGTGCGGGTCAGCGTCGGCGCCACCCCGGGCAAGACCAAGCACTT
TCAGACGTTGGTAATCAGCGATAGCCTCATGCTGTGCGATTGTCCAGGTC
TAGTGTTTCCAAGTTTCGTTAGCAGCACGGCCGAAATGATTTGTGCTGGA
GTGTTGCCCATCATGCAGATGCGGAACGTCATGCCCCCCATGGCCCTCAT
CGCTCGACGAATACCCCGACACATCCTCGAGATCACCTACACGATCAAGC
TCCCGATCCTCCCGGGGGACGTCAGGGATACCGCGGGAAACACCATGCTC
TCGCCGCAGCAGCTCCTAGAGTCGTATTGCCAAGCAAGAGGACTGTTCCG
CGCGCGCGCCCTCGGGGAGTCAGACATGCCACGCGCGGCGAGGCAGATCC
TCAAGGACTTCACAGATGGACGGCTTTTATTTTGCCATCCGCCCGCCGAC
CTGGAGTCAGAGGCCATCACCCGGTTCCTCAAGGAGACCGACAAGACGGC
TCTCAAAACCACCAAGCTCGCCACGAAGCTCGTGTTGCAGCTGAGCAAGG
CCGAGGCAAAGGCGAGCGCGGGAGGCGTGGCCGTCGCGTCTACCGAAGCA
GCGTCTCTCCAGCAGCCAGAAAACCTTGACCTCATGGCAGAGGTCCTTGA
GAAGAGGGCGGCGGTGGCGGCGCGCGAAGCCGAGCTTGGTCTCACGGTCG
GCGCGGGTGGCAAGGGCGGGAAGCCAACCAAGAGGGAGATGGGACTCCTA
CGGTGGGGCAAGAAAGACCGCAAGGTTGGCAATAAGGACCCGTACGGCAA
CCCCGACGTGGAGACCGCGGCGTCGCTCGGACCGGTAGGGGCGAGGGTAG
CCGGGGGGGGCAAGAAGGGGCGCAGGGGCAAGAAGAGGGACGGCTTTGTC
CGGAATACGATGCCGCACCACCAGACGTACTCCGGGCCTGCTGTATGA