prot_Ecto-sp13_S_contig1559.4156.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1559.4156.1
Unique Nameprot_Ecto-sp13_S_contig1559.4156.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length687
Homology
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Match: D8LME0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME0_ECTSI)

HSP 1 Score: 941 bits (2432), Expect = 0.000e+0
Identity = 481/490 (98.16%), Postives = 484/490 (98.78%), Query Frame = 0
Query:   62 MSRKSNSRVIVSATAVLGVLVGLLVAEGASAQQVGNLTGLSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDASSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVTDDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPGGNTINIDKTWSALVVSDGLGDIYVADWSDSKIFWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAVDVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYSE 551
            M+RKSNSRV VSATAVLGVLVGLL AEGA AQQVGNLTGLSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPD+SSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYV DDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNP GNTINIDKTWSALVVSDGLGDIYVADWSDSKI WVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAV+VTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYSE
Sbjct:    1 MTRKSNSRVTVSATAVLGVLVGLLTAEGALAQQVGNLTGLSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYSE 490          
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Match: A0A835ZFA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.270e-42
Identity = 147/490 (30.00%), Postives = 224/490 (45.71%), Query Frame = 0
Query:   90 ASAQQVGNLTGLSRGYSVNLTG-SSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDASSRDLYAIDDDRSVLTHYTYDGSR--FVVSQTVGGFTCLYG-----LGVAPDGANVYVTDDCLYTVTNFRRDPDTGSL--TFQDELSGDPR--NGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPGGNTINIDKTWSALVVSDGLGDIYVADWSDSKIFWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDV----------WEGGAYPRV-AVP------TPDSDGSGTSAVDV-TLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHY 549
            A A  VG L+  S   + + T  S  +NPF   + + ASAI VS DG  VYVGG+ GGL  L R    G L   + W AS F  AL++V+ + ++ D   ++  G++    G+ G+FS+  DG   LL +++   I  A F   S+ D Y ID     L  ++Y  +   F V Q +     L G     L ++PDG NVYV D       NF RDP TG +  +    L GDP     DG+G   S++F+    +   L++    +++L R +  G L   +        G  +        L+ SD   D+YV   S  +I W++ D       ++ +  WF    +P  LIA    + VY      +           W+G  + R  AVP      TP    + T +V+  TL +  S      ++IA          +++ +   EEE    AL+A+PNDA+AHNN G+ ++    ++A AE HY
Sbjct:   20 AQAAAVGELSEASTPVAFDFTSLSEASNPFFSKT-SAASAIAVSRDGRNVYVGGDKGGLAWLTRDVATGDLRYQQGWPASAFTTALKAVQHVSISEDDGYMVICGNKADPYGSLGIFSLDVDGTPSLLYQEEIPDIQHALFAPGSATDFYTIDQTNMELRLWSYSSADHGFSVQQAIA----LEGPSPDALAISPDGLNVYVHDSSSAKNFNFARDPATGLVGESPASTLQGDPNAVGSDGIGHWSSMAFSSSAPFAFALETLVGQVTVLSRAVGNGALAVLSKFPVAYDDGAAVACRADAPLLLASDDDVDLYVLGESRGQIGWLQFD---AATHALHANGWFVTGSRPRQLIADAAYEHVYATFAATNTXXXXXXXXXKWKGAHFNREPAVPPTPAPTTPQPTSATTYSVESQTLLLGESADTFNLMLIAV--------HKSVELAQAEEEKFILALQASPNDALAHNNYGHFLQHKRSNYAGAERHY 493          
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Match: A0A3B9HEV5_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3B9HEV5_9CHLR)

HSP 1 Score: 76.6 bits (187), Expect = 1.020e-10
Identity = 67/229 (29.26%), Postives = 100/229 (43.67%), Query Frame = 0
Query:  158 SLTMTRAWAASDFD-----EALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISA-DGDLQLLQE--------------------DDHRGIIRAGFPDASSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYG---LGVAPDGANVYVTDDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLT 357
            S T T A+     D     E L  V  I ++P GS L T G         GVFSI+   G L  ++                      D + +  AG+   +S   ++IDD   +L +  Y      +S    G T L+    L V PDG ++Y+T     ++T F+R+P TGSL+    L  +    DGL    SL  T DG  +V   + DD+I++ +R+  TG+ T
Sbjct:  225 SATGTLAYIEHHIDNTAGVEGLDGVRDIRISPSGSHLYTAGFED---NAIGVFSINGTSGQLSFIRSYVNGLNGVHGIQGATAIAISPDGKHLYCAGWK-GNSVAAFSIDDTTGLLNYLGY------ISNEQHGITSLWSPSDLEVTPDGKHLYITAATSDSLTAFKREPSTGSLSLIGFLKDNTNGIDGLDWASSLEITSDGKHIVVTAAIDDMITVFRRNPSTGSFT 443          
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Match: A0A5N9ATB2_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9ATB2_9CHLR)

HSP 1 Score: 76.6 bits (187), Expect = 1.120e-10
Identity = 67/229 (29.26%), Postives = 100/229 (43.67%), Query Frame = 0
Query:  158 SLTMTRAWAASDFD-----EALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISA-DGDLQLLQE--------------------DDHRGIIRAGFPDASSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYG---LGVAPDGANVYVTDDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLT 357
            S T T A+     D     E L  V  I ++P GS L T G         GVFSI+   G L  ++                      D + +  AG+   +S   ++IDD   +L +  Y      +S    G T L+    L V PDG ++Y+T     ++T F+R+P TGSL+    L  +    DGL    SL  T DG  +V   + DD+I++ +R+  TG+ T
Sbjct:  529 SATGTLAYIEHHIDNTAGVEGLDGVRDIRISPSGSHLYTAGFED---NAIGVFSINGTSGQLSFIRSYVNGLNGVHGIQGATAIAISPDGKHLYCAGWK-GNSVAAFSIDDTTGLLNYLGY------ISNEQHGITSLWSPSDLEVTPDGKHLYITAATSDSLTAFKREPSTGSLSLIGFLKDNTNGIDGLDWASSLEITSDGKHIVVTAAIDDMITVFRRNPSTGSFT 747          
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Match: A0A382UKF5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382UKF5_9ZZZZ)

HSP 1 Score: 72.0 bits (175), Expect = 4.680e-10
Identity = 62/210 (29.52%), Postives = 91/210 (43.33%), Query Frame = 0
Query:  172 EALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISA---------------------DGDLQLLQEDDHRGIIRAGFPDASSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYG---LGVAPDGANVYVTDDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLT 357
            E L  V  I ++P GS L T           GVFS++A                      G   +    D + +  AG+   +S   ++IDD   +LT+  Y      VS    G T L+    L V PDG ++YVT     ++T FRRD  TGSL+    L  +    DGL    SL    DG  +V   + D+ +++ KR+  TG++T
Sbjct:   30 EGLDDVRDIRLSPSGSHLYTAAFE---ENAIGVFSVNATSGQLSFIGSHINGLDGVHGIQGATAIAISPDGQHLYCAGWK-GNSIAAFSIDDATGLLTYLGY------VSNEQYGVTSLWSPSDLEVTPDGKHLYVTAATSDSLTVFRRDSSTGSLSLIGFLKDNTNGIDGLDWASSLEIMSDGQHIVVTAAVDNTVTVFKRNSSTGSIT 229          
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Match: A7BT48_9GAMM (Uncharacterized protein n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BT48_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 4.190e-7
Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = 0
Query:  245 SVLTHYTYDGSRFVVSQTVGGFTCLYGLG------VAPDGANVYVTDDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPGGNTINIDKTWSALVVSDGLGDIYVADWSDSKI 400
            +V +  T +G+  ++   V G   + GL       V+ DG +VY T     T+  F R  DTG LT  +    D +  DGLG +  ++ + DG +V    S D+ I+I +RD +TG LT   L+     G + +   +   A+ VS     IYVA + D+ +
Sbjct:   21 TVFSRDTTNGNLSLIQTLVDGTPGVTGLNRANSVVVSQDGKHVYTTASSNNTLVLFNRATDTGLLTLIEVYQDDVKGIDGLGGITDVAVSPDGRYVYASGSGDNAIAIFRRDANTGKLTFIDLLRDGIDGIDGLTQAR---AVTVSPQGDHIYVAGFGDNAV 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1559.4156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LME0_ECTSI0.000e+098.16TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZFA9_9STRA2.270e-4230.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3B9HEV5_9CHLR1.020e-1029.26Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]
A0A5N9ATB2_9CHLR1.120e-1029.26Uncharacterized protein (Fragment) n=1 Tax=SAR202 ... [more]
A0A382UKF5_9ZZZZ4.680e-1029.52Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A7BT48_9GAMM4.190e-730.25Uncharacterized protein n=1 Tax=Beggiatoa sp. PS T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 630..662
e-value: 7.1
score: 15.0
coord: 560..592
e-value: 24.0
score: 10.4
coord: 595..627
e-value: 100.0
score: 4.8
coord: 525..557
e-value: 29.0
score: 9.6
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 525..559
e-value: 12.0
score: 14.2
coord: 560..594
e-value: 23.0
score: 11.8
coord: 630..664
e-value: 4.8
score: 16.1
coord: 595..629
e-value: 0.12
score: 21.5
NoneNo IPR availablePFAMPF13432TPR_16coord: 540..588
e-value: 4.8E-4
score: 20.7
coord: 610..664
e-value: 8.5E-7
score: 29.5
NoneNo IPR availablePANTHERPTHR44216FAMILY NOT NAMEDcoord: 540..666
coord: 482..590
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 474..498
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 499..686
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..473
NoneNo IPR availableSUPERFAMILY750113-carboxy-cis,cis-mucoante lactonizing enzymecoord: 120..398
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 476..498
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 573..686
e-value: 9.2E-24
score: 85.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 501..572
e-value: 1.0E-12
score: 50.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 514..671
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 121..269
e-value: 8.7E-6
score: 27.4
coord: 271..388
e-value: 2.8E-7
score: 32.3
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 512..664
score: 27.147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1559contigEcto-sp13_S_contig1559:2590..14103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1559.4156.1mRNA_Ecto-sp13_S_contig1559.4156.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1559 2232..14421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1559.4156.1 ID=prot_Ecto-sp13_S_contig1559.4156.1|Name=mRNA_Ecto-sp13_S_contig1559.4156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=687bp
MHRRRRHCCLRRGKPKTHHQTMRAAAHGGSSSRISFAEGKGIIGRREEDL
PNVICGRSKARMSRKSNSRVIVSATAVLGVLVGLLVAEGASAQQVGNLTG
LSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHL
ARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRG
TFGVFSISADGDLQLLQEDDHRGIIRAGFPDASSRDLYAIDDDRSVLTHY
TYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVTDDCLYTVTNFRRDPDT
GSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRD
LDTGTLTPTTLINTDNPGGNTINIDKTWSALVVSDGLGDIYVADWSDSKI
FWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWE
GGAYPRVAVPTPDSDGSGTSAVDVTLAVALSVSLVAAIVIAGVAAKFIQR
KRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYS
EALRINPRAAFAHNSLGHLLHHRQKDYDAAEEHYLKAINLHWRSPDAHYN
LGCLLQHHKGDVAEAEKQYRHAIKCDPKHGMAQYNLGWVLEKVKQDLKGA
EACYRAAIEADPEDKDAARRLAKVVAQMQAEEEGKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013026TPR-contain_dom