prot_Ecto-sp13_S_contig15588.4154.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15588.4154.1
Unique Nameprot_Ecto-sp13_S_contig15588.4154.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
BLAST of mRNA_Ecto-sp13_S_contig15588.4154.1 vs. uniprot
Match: D7G345_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G345_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 2.140e-160
Identity = 249/304 (81.91%), Postives = 258/304 (84.87%), Query Frame = 0
Query:    1 MTNSQSTTFLGRDSRWRPFVALPLSF-RPCWWFCRRWVNELREGGSAWTWTPA------DTVSKKGFQRWLRPPSPIPGLKRKFRSKRSRGGSLDGEVLRALSGVDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVGAEAVAANLRGRGVCERGDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMSLGRDTSYLRAHDAGFDGDRDRSYTGGWSNSPTSPEHGERKLPEDWHVLLASTSPVTPPLASPLPQADPGRPPRSCTSSRRPSPTSSGEILMPGLPPP 297
            M NSQSTT   RD RW P  ALPLS  R C WFC R VN L EGGS+WTWTPA      DTVSKKGFQR LRPPSPIPGLK+KFRSKRSRG SLDGEVL ALSGVDREGDFVLTPVGSDG NYAG LDTSAGTDALDDAGSDNSGASVEEGGV AEAVAANLRG G  +  DHSTGQPKRA KLARGL NVARRLTKRSVGSSEAMS+GRD SYLRAHDA FDG+  RS+TGGWSNSPTSPEHGERKLP+DWH+ L STSPVTPP+ASP PQAD GRPPRS T SRRPSPT SGEILMPGLPPP
Sbjct:    1 MINSQSTTVPPRDPRWCPSEALPLSSCRRCGWFCGRSVNGLGEGGSSWTWTPASSTYHRDTVSKKGFQRLLRPPSPIPGLKKKFRSKRSRGSSLDGEVLHALSGVDREGDFVLTPVGSDGNNYAGGLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGKGEDHSTGQPKRATKLARGLLNVARRLTKRSVGSSEAMSIGRDNSYLRAHDADFDGEGPRSFTGGWSNSPTSPEHGERKLPQDWHLPLTSTSPVTPPMASPPPQADQGRPPRSSTGSRRPSPTRSGEILMPGLPPP 304          
BLAST of mRNA_Ecto-sp13_S_contig15588.4154.1 vs. uniprot
Match: D7FMT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT9_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 9.040e-141
Identity = 219/247 (88.66%), Postives = 226/247 (91.50%), Query Frame = 0
Query:   53 DTVSKKGFQRWLRPPSPIPGLKRKFRSKRSRGGSLDGEVLRALSGVDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVGAEAVAANLRGRGVCERGDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMSLGRDTSYLRAHDAGFDGDRDRSYTGGWSNSPTSPEHGER--KLPEDWHVLLASTSPVTPPLASPLPQADPGRPPRSCTSSRRPSPTSSGEILMPGLPPP 297
            DTVSKKGFQRWLRPPSPIPGLK+KFRSKRSRG SLDGEVL ALSGVDREGDFVLTPVGSDG NYAGDLDTSAGTDALDDAGSDNSGASVEEGGV AEAVAANLRG G  E  DHSTGQPKRA KLARGLSNVARRLTKRSVGSSEAMSLGRD SYLRAHDA FDGD  RS+TGGWSNSPTSPEHGER  KLP+DWH+ L STSPVTPP+ASP PQAD GRPPRS TSSRRPSPT+SGE+LMPGLPPP
Sbjct:   60 DTVSKKGFQRWLRPPSPIPGLKKKFRSKRSRGSSLDGEVLHALSGVDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGEGEDHSTGQPKRATKLARGLSNVARRLTKRSVGSSEAMSLGRDNSYLRAHDADFDGDGPRSFTGGWSNSPTSPEHGERHRKLPQDWHLPLTSTSPVTPPMASPPPQADQGRPPRSSTSSRRPSPTTSGEMLMPGLPPP 306          
BLAST of mRNA_Ecto-sp13_S_contig15588.4154.1 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 9.450e-122
Identity = 214/248 (86.29%), Postives = 220/248 (88.71%), Query Frame = 0
Query:   53 DTVSKKGFQRWLRPPSPIPGLKRKFRSKRSRGGSLDGEVLRALSGVDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGASV--EEGGVGAEAVAANLRGRGVCERGDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMSLGRDTSYLRAHDAGFDGDRDRSYTGGWSNSPTSPEHGER--KLPEDWHVLLASTSPVTPPLASPLPQADPGRPPRSCTSSRRPSPTSSGEILMPGLPP 296
            DTVSKKGFQRWLRPPSPIPGLK+KFRSKRSRGGSLDG+VLRALSGVDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGA V  EEGGV AEAVAANLRG G  E  D STGQPKR+IKLARGLSNVARRLTKRSVGSSEA        YLRAHDA FDGD DRSYTGGW NSPTSPEHGER  KLP+DWHV L STSPVTPPLASP PQAD GRPPRS TSSRRPSPT+SGE+LMPGLPP
Sbjct:   65 DTVSKKGFQRWLRPPSPIPGLKKKFRSKRSRGGSLDGQVLRALSGVDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGAGVGVEEGGVSAEAVAANLRGGGRGEGEDRSTGQPKRSIKLARGLSNVARRLTKRSVGSSEA------NIYLRAHDADFDGDGDRSYTGGWGNSPTSPEHGERHRKLPQDWHVPLTSTSPVTPPLASPPPQADQGRPPRSSTSSRRPSPTTSGEMLMPGLPP 306          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15588.4154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G345_ECTSI2.140e-16081.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMT9_ECTSI9.040e-14188.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI30_9PHAE9.450e-12286.29CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15588contigEcto-sp13_S_contig15588:2342..4124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15588.4154.1mRNA_Ecto-sp13_S_contig15588.4154.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15588 2342..4124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15588.4154.1 ID=prot_Ecto-sp13_S_contig15588.4154.1|Name=mRNA_Ecto-sp13_S_contig15588.4154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MTNSQSTTFLGRDSRWRPFVALPLSFRPCWWFCRRWVNELREGGSAWTWT
PADTVSKKGFQRWLRPPSPIPGLKRKFRSKRSRGGSLDGEVLRALSGVDR
EGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVGAEA
VAANLRGRGVCERGDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMS
LGRDTSYLRAHDAGFDGDRDRSYTGGWSNSPTSPEHGERKLPEDWHVLLA
STSPVTPPLASPLPQADPGRPPRSCTSSRRPSPTSSGEILMPGLPPP
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