prot_Ecto-sp13_S_contig15582.4152.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15582.4152.1
Unique Nameprot_Ecto-sp13_S_contig15582.4152.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length364
Homology
BLAST of mRNA_Ecto-sp13_S_contig15582.4152.1 vs. uniprot
Match: D8LF98_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF98_ECTSI)

HSP 1 Score: 594 bits (1532), Expect = 6.080e-211
Identity = 333/360 (92.50%), Postives = 333/360 (92.50%), Query Frame = 0
Query:    1 GGVDPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGSSVGGGVAGASPGTGSFKAPXXXXXXXXXXDKHSATADTQPAAAASGWGAGTK 360
            GG DPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGG                    XXXXXXXXXX      ADTQPAAAASGWGAGTK
Sbjct:   35 GGADPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTK 394          
BLAST of mRNA_Ecto-sp13_S_contig15582.4152.1 vs. uniprot
Match: A0A835YV50_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV50_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.720e-72
Identity = 124/238 (52.10%), Postives = 163/238 (68.49%), Query Frame = 0
Query:   11 GIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAP 248
            GI  K +  RRR  E + QK GKE  D+++FE+R +   DL  KV KVRD+MK  LD +RA+     DL NAC +   RD  F   Q QLD+ MR  LD +V KA++SL+ K+APF ELD+ + +RN LKLDYDHY+RKVR+LKEK G+DA+K++NNE KL AAR  + +AT  +YK F YYDAVGG L  PE+E  K AQ+ F+ +A + VK VP RDP +VA E++ +G+DG N P
Sbjct:   37 GIKGKMAVNRRRFNEKLGQKMGKEGTDDADFEDRHRATQDLHFKVCKVRDSMKALLDATRAMSQRAVDLSNACGDADARDQDFITTQLQLDQAMRSMLDDSVGKALDSLDRKLAPFKELDERVKTRNNLKLDYDHYVRKVRELKEKSGADASKIANNEMKLEAARVAVHKATLSVYKAFNYYDAVGGRLVAPEVEAFKAAQRAFYMAALNCVKDVPLRDPVQVAAEVDRLGEDGSNRP 274          
BLAST of mRNA_Ecto-sp13_S_contig15582.4152.1 vs. uniprot
Match: A0A6G0WWC6_9STRA (BAR domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWC6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.150e-7
Identity = 60/258 (23.26%), Postives = 113/258 (43.80%), Query Frame = 0
Query:   11 GIIDKFSTGRRRLKENIAQKTGK-EAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEV-----------GLRDVG------FQNAQFQLDEDMRKQLDAAVAKAV-ESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPF 249
            G++DK  + +RR  +    K GK E  D+ E+++   R  +L + V  +   MK  +    +L   C  LG   + +           G++ +       F  +  ++D   R+   + ++  V  +++ K+       K +  R +LKLDYD  +RK+R  +E    +AA +   + KL AA+ +L E+T  +       +   GT+ Q E++  +Q Q  FF    S   G P      ++ + + + +     PF
Sbjct:   15 GLMDKIRSAKRRFIQKALTKIGKAECSDDHEYQQLRDRQLELIDTVEHMLTHMKSFVTTLVSLGYGCTLLGEDMNVIRDNNAVKSPSYGVKPLNDCASNEFSQSMNRIDNAARELAASMLSTTVVANMQTKLDELHGFKKELEHRERLKLDYDSAVRKLRHAREH--REAADVLRRDQKLQAAQAKLAESTALMVAKMKECEGTRGTMLQREVDDFRQMQAQFFQLCVSAFTGPPPPPRHAMSSKADEISQAEATNPF 270          
BLAST of mRNA_Ecto-sp13_S_contig15582.4152.1 vs. uniprot
Match: A0A485K280_9STRA (Aste57867_199 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K280_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.090e-5
Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 0
Query:  109 DAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDP--------QEVAREIESVG 241
            D  V  A+  L+  +A       ++ +R +LKLD+D Y R+ R L     + +A+ +  E KL  AR   +  T +LY+ F  Y+    T+   E+EM++QA   F  +   V++ +P   P        +E+ RE++++G
Sbjct:  323 DIVVGGAIRCLDTHIAKIESYRPLMATRAELKLDFDSYDRRARQL-----APSARKARVETKLMEARVAFESCTLQLYRVFARYENERATMLHGELEMVRQALHAFLETQAKVMQ-IPIDPPAAPCMTKEEELFREMKTMG 457          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15582.4152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF98_ECTSI6.080e-21192.50SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YV50_9STRA2.720e-7252.10SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6G0WWC6_9STRA2.150e-723.26BAR domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A485K280_9STRA2.090e-528.37Aste57867_199 protein n=1 Tax=Aphanomyces stellatu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..184
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
NoneNo IPR availablePANTHERPTHR47174:SF3BRIDGING INTEGRATOR 3coord: 20..224
NoneNo IPR availablePANTHERPTHR47174FAMILY NOT NAMEDcoord: 20..224
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 10..225
e-value: 1.6E-24
score: 88.7
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 34..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15582contigEcto-sp13_S_contig15582:603..4085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15582.4152.1mRNA_Ecto-sp13_S_contig15582.4152.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15582 603..4085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15582.4152.1 ID=prot_Ecto-sp13_S_contig15582.4152.1|Name=mRNA_Ecto-sp13_S_contig15582.4152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp
GGVDPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVAD
LKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQL
DEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKV
RDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLC
QPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFT
LPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSAS
APWLTGGSSVGGGVAGASPGTGSFKAPPAGGGGSSWWDKHSATADTQPAA
AASGWGAGTKVRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf