prot_Ecto-sp13_S_contig15580.4151.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15580.4151.1
Unique Nameprot_Ecto-sp13_S_contig15580.4151.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A6H5L6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 7.040e-31
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTDIFFRGTLVLVHRDELVQQ 68
            STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQ   ++  RGTLVLVHRDELVQQ
Sbjct:   13 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQ 80          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: D8LIE3_ECTSI (ResIII domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE3_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 3.870e-29
Identity = 62/90 (68.89%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLT----------------------DIFFRGTLVLVHRDELVQQ 68
            STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQ+ T                      ++  RGTLVLVHRDELVQQ
Sbjct:   10 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQIKTRDEYANGEGRGRFRCLRQQAFPELCRRGTLVLVHRDELVQQ 99          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A835YHM4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.280e-18
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTDIFFRGTLVLVHRDELVQQ 68
            +T +LRPYQ  V+ +   LY QGT R+LVP+ATG+GKT VF+H+P    ++  RGTLVLVHR+ELV+Q
Sbjct:   16 ATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQ 83          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A1G4IYC9_9SACH (LANO_0B05380g1_1 n=1 Tax=Lachancea nothofagi CBS 11611 TaxID=1266666 RepID=A0A1G4IYC9_9SACH)

HSP 1 Score: 63.5 bits (153), Expect = 3.850e-10
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTDIFFRGT---LVLVHRDELVQQ 68
            S S LRPYQ   ID+ ++    GT+R+ V +ATG GKTV+F+HL   L  +  R T   L+LVHR EL QQ
Sbjct:   18 SNSFLRPYQQECIDKCIQSITHGTKRIGVSIATGGGKTVIFSHLIDRLRSLSGRDTFRTLILVHRRELAQQ 88          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: B6K5T8_SCHJY (ATP-dependent DNA helicase Irc3 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K5T8_SCHJY)

HSP 1 Score: 60.5 bits (145), Expect = 4.680e-9
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTDIFFRGT--LVLVHRDELVQQ 68
            ST  LRPYQ   I   ++ + QGTRR+ + LATG GKTVVF+HL   +  I       L+L+HR EL QQ
Sbjct:   13 STFHLRPYQEECIQSVLQSFAQGTRRVAISLATGSGKTVVFSHLIDRVQPIRPNANQCLILLHRKELAQQ 82          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A1E4TAH9_9ASCO (Uncharacterized protein (Fragment) n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TAH9_9ASCO)

HSP 1 Score: 58.2 bits (139), Expect = 3.050e-8
Identity = 35/66 (53.03%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    5 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLT--DIFFRGTLVLVHRDELVQQ 68
            LRPYQ   ID  +     GT R+ V LATG GKTV+F+HL    T  D     TLVLVHR ELV Q
Sbjct:    1 LRPYQEKCIDSILTAINNGTNRVGVSLATGAGKTVIFSHLIDRFTVDDPLRSQTLVLVHRKELVFQ 66          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A1Y2FRL0_PROLT (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FRL0_PROLT)

HSP 1 Score: 58.2 bits (139), Expect = 3.060e-8
Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTDIFFRG-TLVLVHRDELVQQ 68
            S   LRPYQ   I   +    +G RR+ V LATG GKTV+FTHL + + +   R  TL+LVHR EL  Q
Sbjct:   35 SAVTLRPYQEECIQSCITAIQEGKRRIAVSLATGSGKTVIFTHLIERVPEEGKRTQTLILVHRKELADQ 103          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A2G5I4N2_CERBT (Putative ATP-dependent helicase IRC3 n=1 Tax=Cercospora beticola TaxID=122368 RepID=A0A2G5I4N2_CERBT)

HSP 1 Score: 58.2 bits (139), Expect = 3.070e-8
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    5 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHL----PQVLTDIFFRGTLVLVHRDELVQQ 68
            LRPYQ   I   +E   +G +RL + LATG GKTV+F+HL    P   TD     TL+L HR ELV+Q
Sbjct:   60 LRPYQQESIQSVLEYIAKGEKRLAISLATGSGKTVIFSHLIAQVPSPTTDA--TQTLILAHRRELVEQ 125          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A0A0K1PRU5_9DELT (DNA helicase, phage associated protein n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1PRU5_9DELT)

HSP 1 Score: 56.6 bits (135), Expect = 1.070e-7
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    5 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTDIFFRGTLVLVHRDELVQQ 68
            LRPYQ   I+  ++   +GTRRLLV L TG GKTVVF+ L ++      R  LVL HR+EL+ Q
Sbjct:    6 LRPYQRDAIEAVLKARREGTRRLLVCLPTGAGKTVVFSQLARLAR----RQVLVLAHREELLTQ 65          
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Match: A5DIK4_PICGU (Uncharacterized protein n=2 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) TaxID=294746 RepID=A5DIK4_PICGU)

HSP 1 Score: 56.6 bits (135), Expect = 1.070e-7
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHL-PQVLTDIFFRGT--LVLVHRDELVQQ 68
            ST  LR YQ+  ID  +    +G +R  V LATG GKTVVF+HL P +  ++   G+  LVL H++EL++Q
Sbjct:   23 STFTLRDYQNEAIDSVLAALNRGVKRPAVVLATGGGKTVVFSHLLPHIKPNVLSGGSKVLVLAHKEELIKQ 93          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15580.4151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6G6_9PHAE7.040e-3189.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIE3_ECTSI3.870e-2968.89ResIII domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YHM4_9STRA7.280e-1857.35P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1G4IYC9_9SACH3.850e-1049.30LANO_0B05380g1_1 n=1 Tax=Lachancea nothofagi CBS 1... [more]
B6K5T8_SCHJY4.680e-948.57ATP-dependent DNA helicase Irc3 n=1 Tax=Schizosacc... [more]
A0A1E4TAH9_9ASCO3.050e-853.03Uncharacterized protein (Fragment) n=1 Tax=Tortisp... [more]
A0A1Y2FRL0_PROLT3.060e-847.83p-loop containing nucleoside triphosphate hydrolas... [more]
A0A2G5I4N2_CERBT3.070e-848.53Putative ATP-dependent helicase IRC3 n=1 Tax=Cerco... [more]
A0A0K1PRU5_9DELT1.070e-750.00DNA helicase, phage associated protein n=1 Tax=Lab... [more]
A5DIK4_PICGU1.070e-745.07Uncharacterized protein n=2 Tax=Meyerozyma guillie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 4..68
e-value: 2.6E-9
score: 37.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..68
e-value: 3.9E-14
score: 54.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15580contigEcto-sp13_S_contig15580:3086..3758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15580.4151.1mRNA_Ecto-sp13_S_contig15580.4151.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15580 3086..3758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15580.4151.1 ID=prot_Ecto-sp13_S_contig15580.4151.1|Name=mRNA_Ecto-sp13_S_contig15580.4151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
STSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQVLTD
IFFRGTLVLVHRDELVQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006935Helicase/UvrB_N
IPR027417P-loop_NTPase