prot_Ecto-sp13_S_contig15573.4142.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15573.4142.1
Unique Nameprot_Ecto-sp13_S_contig15573.4142.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A6H5JRC2_9PHAE (Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC2_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.740e-30
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCPCLESKAMTEA 59
            ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVD GRP GCCRG SGGCPCLESKAMT A
Sbjct:  148 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDAGRPAGCCRGGSGGCPCLESKAMTAA 206          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: D7G4V3_ECTSI (Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4V3_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 7.870e-30
Identity = 55/60 (91.67%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCPCLESKAMTEAT 60
            ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGR  GCCRGDSGGCPCLESKA T +T
Sbjct:  148 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRRAGCCRGDSGGCPCLESKAETAST 207          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A836C8N1_9STRA (Xanthine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.310e-18
Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGG-CPCLESKA 55
            AT A+IE+ +DGNLCRCTGYRPILDAAKSL  D   P GCCRG +GG CPC+ +KA
Sbjct:  136 ATVADIEESMDGNLCRCTGYRPILDAAKSLASDARAPQGCCRGSAGGGCPCMAAKA 191          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: W7TFQ7_9STRA (Xanthine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.930e-15
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCPCLE 52
            A+A  +E+ +DGNLCRCTGYRP+LDAAK+L   G R  GCCRG  G CPC E
Sbjct:  186 ASADFLEENMDGNLCRCTGYRPLLDAAKTLLGPGARGAGCCRGGKGSCPCQE 237          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A7S3H3P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3P9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.470e-14
Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDG---GRPTGCCRGDSGGCPCLESKAMTEAT 60
            AT  EIE  LDGNLCRCTGYRPILDAA+SL  +      P GCC+G+ G CPC E+  +   T
Sbjct:  156 ATPHEIESSLDGNLCRCTGYRPILDAARSLSNNKESHAPPAGCCKGNGGKCPCAETLKVESTT 218          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A3R7FYU6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FYU6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.190e-12
Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 TAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCP 49
            T  EIE G+DGNLCRCTGYRPILDAAKS GVD G     C+G   GCP
Sbjct:  118 TMEEIEHGMDGNLCRCTGYRPILDAAKSFGVDSGEAH--CKGTCPGCP 163          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A2A6CQ10_PRIPA (FAD-binding PCMH-type domain-containing protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6CQ10_PRIPA)

HSP 1 Score: 70.1 bits (170), Expect = 1.630e-12
Identity = 34/63 (53.97%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    2 TAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCPCLESKAMTEATSAPE 64
            TA EI   L GNLCRCTGYRPIL+A +S     G   GCC G  GGCPC E+K        PE
Sbjct:  104 TAEEIRSALVGNLCRCTGYRPILEALESFSKSSG---GCCMGGKGGCPCKEAKGEGSKEKTPE 163          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A5D6XJE5_9STRA (Uncharacterized protein n=3 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJE5_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.230e-12
Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 TAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCP 49
            T  +IE GLDGNLCRCTGYRPILDAAKS G D   P   C+G+  GCP
Sbjct:  160 TMEDIEHGLDGNLCRCTGYRPILDAAKSFGSDA--PHATCKGECDGCP 205          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: A0A8K1C448_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C448_PYTOL)

HSP 1 Score: 67.8 bits (164), Expect = 1.060e-11
Identity = 32/48 (66.67%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    2 TAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCP 49
            T  EIE G+DGNLCRCTGYRPILDAAKS G D       C+GD  GCP
Sbjct:  168 TMEEIEHGMDGNLCRCTGYRPILDAAKSFGADA--LDSHCKGDCPGCP 213          
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Match: H3F5R4_PRIPA (Gad-3 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=H3F5R4_PRIPA)

HSP 1 Score: 66.6 bits (161), Expect = 2.710e-11
Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    2 TAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCPCLESKA 55
            TA EI   L GNLCRCTGYRPIL+A +S     G   GCC G  GGCPC + K+
Sbjct:  134 TADEIRSALVGNLCRCTGYRPILEALESFARPSG---GCCMGGKGGCPCKDGKS 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15573.4142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRC2_9PHAE5.740e-3093.22Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP... [more]
D7G4V3_ECTSI7.870e-3091.67Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=28... [more]
A0A836C8N1_9STRA1.310e-1869.64Xanthine dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
W7TFQ7_9STRA5.930e-1563.46Xanthine dehydrogenase n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S3H3P9_9STRA1.470e-1457.14Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A3R7FYU6_9STRA1.190e-1268.75Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2A6CQ10_PRIPA1.630e-1253.97FAD-binding PCMH-type domain-containing protein n=... [more]
A0A5D6XJE5_9STRA2.230e-1266.67Uncharacterized protein n=3 Tax=Pythium brassicum ... [more]
A0A8K1C448_PYTOL1.060e-1166.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3F5R4_PRIPA2.710e-1157.41Gad-3 n=2 Tax=Pristionchus pacificus TaxID=54126 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002888[2Fe-2S]-bindingPFAMPF01799Fer2_2coord: 2..27
e-value: 7.5E-10
score: 38.7
NoneNo IPR availableGENE3D3.30.365.10coord: 1..64
e-value: 4.0E-15
score: 56.3
NoneNo IPR availablePANTHERPTHR11908:SF86ALDEHYDE OXIDASEcoord: 2..58
NoneNo IPR availablePANTHERPTHR11908XANTHINE DEHYDROGENASEcoord: 2..58
IPR036884[2Fe-2S]-binding domain superfamilySUPERFAMILY47741CO dehydrogenase ISP C-domain likecoord: 2..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15573contigEcto-sp13_S_contig15573:1338..3583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15573.4142.1mRNA_Ecto-sp13_S_contig15573.4142.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15573 1338..3583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15573.4142.1 ID=prot_Ecto-sp13_S_contig15573.4142.1|Name=mRNA_Ecto-sp13_S_contig15573.4142.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
ATAAEIEDGLDGNLCRCTGYRPILDAAKSLGVDGGRPTGCCRGDSGGCPC
LESKAMTEATSAPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0028882Fe-2S-bd
IPR0368842Fe-2S-bd_dom_sf