prot_Ecto-sp13_S_contig15571.4141.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15571.4141.1
Unique Nameprot_Ecto-sp13_S_contig15571.4141.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length58
Homology
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: D8LJZ5_ECTSI (ND11 homolog, NADH dehydrogenase (Ubiquinone) subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ5_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 6.930e-28
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            R +RSAFVFPPPGIAR+DWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL
Sbjct:  458 RPQRSAFVFPPPGIAREDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 515          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: A0A2G9R9W8_LITCT (Molybdopterin domain-containing protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9R9W8_LITCT)

HSP 1 Score: 59.7 bits (143), Expect = 3.060e-10
Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            R +R+     PPG+AR+DWKI+RA+ E  G+TLPY D + +  R+Q + P  +  D++
Sbjct:   24 RAQRTLTAVSPPGVAREDWKIIRAISELAGITLPYDDQDSVRARLQEVSPNLVRYDDV 81          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: F6Z1V0_XENTR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=11 Tax=Xenopus TaxID=8353 RepID=F6Z1V0_XENTR)

HSP 1 Score: 59.3 bits (142), Expect = 7.890e-9
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            R +R+     PPG+AR+DW+I+RA+ E  GVTLPY D + + ER+Q + P  +  D++
Sbjct:  559 RAQRTFVAVTPPGMAREDWRIIRAISELAGVTLPYEDHDGVRERLQEVSPNLVRYDDV 616          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: A0A8C5QU91_9ANUR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QU91_9ANUR)

HSP 1 Score: 58.5 bits (140), Expect = 1.480e-8
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            R +R+     PPG+AR+DW+I+RAL E  G+TLPY D   +E+R++ + P  +  DE+
Sbjct:  602 RAQRTYVAVTPPGLAREDWRILRALSEVAGITLPYEDHNGIEKRLEEVSPNLVRYDEV 659          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: A0A8C5QTY4_9ANUR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QTY4_9ANUR)

HSP 1 Score: 58.5 bits (140), Expect = 1.480e-8
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            R +R+     PPG+AR+DW+I+RAL E  G+TLPY D   +E+R++ + P  +  DE+
Sbjct:  611 RAQRTYVAVTPPGLAREDWRILRALSEVAGITLPYEDHNGIEKRLEEVSPNLVRYDEV 668          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: R7VL76_CAPTE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VL76_CAPTE)

HSP 1 Score: 58.2 bits (139), Expect = 2.020e-8
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVP 50
            R +++     PPG+AR+DWKI+RAL E  G+TLPY D  E+ ER++ + P
Sbjct:  607 RAQQTNMAVVPPGLAREDWKIIRALSELCGLTLPYDDIHELRERMEEISP 656          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: A0A642V538_9ASCO (Uncharacterized protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V538_9ASCO)

HSP 1 Score: 58.2 bits (139), Expect = 2.020e-8
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   11 PPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            PPG+AR+DWKI+RA+GE++GV+LPY D  E+  R+  + P  L+ D L
Sbjct:  617 PPGVAREDWKILRAVGEYLGVSLPYEDVYEVRSRLAEIAPNLLSHDVL 664          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: A0A1R1PKD8_ZANCU (NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial (Fragment) n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PKD8_ZANCU)

HSP 1 Score: 56.2 bits (134), Expect = 3.110e-8
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    1 RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDEL 58
            R + +  V  PPG AR+DWKI+RAL EF   TLPYSD  ++  R+  + P  +  D L
Sbjct:   54 RAQLTRAVLSPPGAAREDWKIIRALSEFADFTLPYSDISQLRSRMADVSPTLVEYDSL 111          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: A0A397TJ23_9GLOM (NADH-ubiquinone oxidoreductase 78 kDa subunit n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TJ23_9GLOM)

HSP 1 Score: 57.4 bits (137), Expect = 3.770e-8
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0
Query:   10 PPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMD 56
            PPPG AR+DWKI+RAL E VGVTLPY D   +  R+  + P  +  D
Sbjct:  615 PPPGAAREDWKIIRALSEVVGVTLPYDDIFSLRNRMSDIAPHLIRYD 661          
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Match: UPI00026591DC (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026591DC)

HSP 1 Score: 56.6 bits (135), Expect = 7.060e-8
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    4 RSAFVFP---PPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVP 50
            R+   FP   PPG+AR+DWKI+RAL EF GV LPY + EE+  R+  + P
Sbjct:  597 RTQQTFPAVTPPGLAREDWKIIRALSEFAGVGLPYDNIEELRGRMSEIAP 646          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15571.4141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ5_ECTSI6.930e-2894.83ND11 homolog, NADH dehydrogenase (Ubiquinone) subu... [more]
A0A2G9R9W8_LITCT3.060e-1041.38Molybdopterin domain-containing protein n=1 Tax=Li... [more]
F6Z1V0_XENTR7.890e-943.10NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
A0A8C5QU91_9ANUR1.480e-843.10NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
A0A8C5QTY4_9ANUR1.480e-843.10NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
R7VL76_CAPTE2.020e-848.00NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
A0A642V538_9ASCO2.020e-852.08Uncharacterized protein n=1 Tax=Trichomonascus cif... [more]
A0A1R1PKD8_ZANCU3.110e-844.83NADH-ubiquinone oxidoreductase 78 kDa subunit, mit... [more]
A0A397TJ23_9GLOM3.770e-853.19NADH-ubiquinone oxidoreductase 78 kDa subunit n=1 ... [more]
UPI00026591DC7.060e-852.00NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY53706Formate dehydrogenase/DMSO reductase, domains 1-3coord: 3..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15571contigEcto-sp13_S_contig15571:1810..1983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15571.4141.1mRNA_Ecto-sp13_S_contig15571.4141.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15571 1810..1983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15571.4141.1 ID=prot_Ecto-sp13_S_contig15571.4141.1|Name=mRNA_Ecto-sp13_S_contig15571.4141.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp
RFRRSAFVFPPPGIARQDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVP
LTLNMDEL
back to top