prot_Ecto-sp13_S_contig1557.4138.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1557.4138.1
Unique Nameprot_Ecto-sp13_S_contig1557.4138.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length309
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1557.4138.1 vs. uniprot
Match: D7G235_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G235_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 7.670e-182
Identity = 279/315 (88.57%), Postives = 282/315 (89.52%), Query Frame = 0 
Query:    1 MTSVPWDDEEETAASNVRWQGRTLINFVAGRSRLRTLPVVIHILPKDIGWFSADASLFNELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYNGDDITSANK-------RKEKRFVGSNXXXXXXXXXXXXXXXPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSTPATADQEALDVEAIGRRSGAGTGVTVGVQGGPRDTGLLTWLWGGGGEGGSTAAGGVKGGVRQHFIGSASWQGSSPSEQRREENDDDIQRAIALSLAVEPRAEGGGVEESKG 308
            M SV WDDEEETAASNVRWQGRTLINFVAGRSRLRTLPVVIHILPKDIGWFSADASLF+ELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSY GDDI  AN+        K KR VGSN XXXXXXX       PAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSTPA ADQEALDVEAIGRRSGAGTG TV VQGGPRDTGLLTWLWG GGEGG +AAGGVKGGVRQHFIGSASWQG SPSEQRRE    DIQRAIALSLAVEPRAEGGGVEESKG
Sbjct:    1 MASVSWDDEEETAASNVRWQGRTLINFVAGRSRLRTLPVVIHILPKDIGWFSADASLFDELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIERANRGSSSAGSSKGKRCVGSNSXXXXXXX-------PAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSTPAAADQEALDVEAIGRRSGAGTGATVDVQGGPRDTGLLTWLWGVGGEGGGSAAGGVKGGVRQHFIGSASWQGKSPSEQRREXXXXDIQRAIALSLAVEPRAEGGGVEESKG 308
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BLAST of mRNA_Ecto-sp13_S_contig1557.4138.1 vs. uniprot
Match: A0A836CBI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.490e-27
Identity = 64/198 (32.32%), Postives = 110/198 (55.56%), Query Frame = 0 
Query:    7 DDEEETAASNVRWQGRTLINFVAGRSRLRTL-PVVIHILPKDIGWFSADAS-LFNELKLLLRERVIS------ATGNGDKDAEAPK-----SRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYNGDDITSANKRKEKRFVGSNXXXXXXXXXXXXXXXPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQF 191
            +D +   + +  WQ R  IN + G +R + + P+V+H+LP+D+ W++A +  L+ EL+ LL+++VI+      +   GD++ E        SR++AR+ E C+QGE LQFT+R+R T P Y+++++N     +  ++   +                    PA+  LPL+E+TLL WV+ FD  +PY P+P E    F
Sbjct:    7 NDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITFNSVPAATQQQQTASKQAA-----------------PAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1557.4138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G235_ECTSI7.670e-18288.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBI6_9STRA6.490e-2732.32Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1557contigEcto-sp13_S_contig1557:7906..9576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1557.4138.1mRNA_Ecto-sp13_S_contig1557.4138.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1557 7612..9576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1557.4138.1 ID=prot_Ecto-sp13_S_contig1557.4138.1|Name=mRNA_Ecto-sp13_S_contig1557.4138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp
MTSVPWDDEEETAASNVRWQGRTLINFVAGRSRLRTLPVVIHILPKDIGW
FSADASLFNELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGER
LQFTYRYRKTLPRYTVLSYNGDDITSANKRKEKRFVGSNSSGGGSGGGGG
GGGGPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSTPAT
ADQEALDVEAIGRRSGAGTGVTVGVQGGPRDTGLLTWLWGGGGEGGSTAA
GGVKGGVRQHFIGSASWQGSSPSEQRREENDDDIQRAIALSLAVEPRAEG
GGVEESKG*
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