prot_Ecto-sp13_S_contig15565.4134.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15565.4134.1
Unique Nameprot_Ecto-sp13_S_contig15565.4134.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15565.4134.1 vs. uniprot
Match: D7G1B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.670e-107
Identity = 163/171 (95.32%), Postives = 167/171 (97.66%), Query Frame = 0 
Query:    1 VRTAVVVQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGKMAQDTLTLANVNESGLQGITLDSCPFPRNGSWADGSLMRDSLLSASGTLVGATGPLGMSVGEDDDGRDANTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQ 171
            +RT V+ QANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGKMAQDTLTLANVN SGLQGI LDSCPFPRNGSWADG+LMRDSLLSASGTLVGATGPLGMSVGEDDDGRDA+TVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQ
Sbjct:  166 IRT-VLSQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGKMAQDTLTLANVNGSGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQ 335
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15565.4134.1 vs. uniprot
Match: A0A6H5JES6_9PHAE (PBPe domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.270e-63
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 0 
Query:   63 MAQDTLTLANVNESGLQGITLDSCPFPRNGSWADGSLMRDSLLSASGTLVGATGPLGMSVGEDDDGRDANTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQ 171
            MAQDTLTLANVN+SGLQGI LDSCPFPRNGSWADG+LMRDSLLSASGTLVGATGPLGMSVGEDDDGRD +TVTFCAVNLKPDATHGARFEVISTLDGATL+SEDGEGFQ
Sbjct:    1 MAQDTLTLANVNDSGLQGIVLDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDVDTVTFCAVNLKPDATHGARFEVISTLDGATLDSEDGEGFQ 109
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15565.4134.1 vs. uniprot
Match: A0A6H5J962_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J962_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.750e-30
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0 
Query:    1 VRTAVVVQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGKM 63
            VRT V+ QANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGK+
Sbjct:  182 VRT-VLSQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTGKV 243
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15565.4134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1B0_ECTSI1.670e-10795.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JES6_9PHAE1.270e-6394.50PBPe domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5J962_9PHAE1.750e-3093.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15565contigEcto-sp13_S_contig15565:1120..3654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15565.4134.1mRNA_Ecto-sp13_S_contig15565.4134.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15565 1120..3654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15565.4134.1 ID=prot_Ecto-sp13_S_contig15565.4134.1|Name=mRNA_Ecto-sp13_S_contig15565.4134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
VRTAVVVQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGA
LGVRACTPRTGKMAQDTLTLANVNESGLQGITLDSCPFPRNGSWADGSLM
RDSLLSASGTLVGATGPLGMSVGEDDDGRDANTVTFCAVNLKPDATHGAR
FEVISTLDGATLESEDGEGFQ
back to top