mRNA_Ecto-sp13_S_contig15562.4133.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15562.4133.1
Unique NamemRNA_Ecto-sp13_S_contig15562.4133.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: D7G7Y2_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y2_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 7.670e-142
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFA+TASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI
Sbjct:  185 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAQTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 403          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A835Z4T5_9STRA (Major facilitator transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T5_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.600e-80
Identity = 136/219 (62.10%), Postives = 162/219 (73.97%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGALVF P+VN LM KF++MP YLGT D V T +  GK+ A+      EV+SV S+++A+LPYD+AEGVYVVGTG+TGA  AL VCGA+YG IMLASA TIK P PG+K  G   P A+E  A  AV   V  N  +KTPQF  LG   F V C G GL SVAKPMM EVFS++LP +VTA+FAS YVQ+L+ G+LGGRIGWAAFSDKFGR+LTF +
Sbjct:  229 FGSGALVFTPMVNNLMAKFAQMPQYLGTADSVDTTVVGGKMLAQVGDAAREVISVTSADIAKLPYDIAEGVYVVGTGTTGAGTALSVCGAVYGAIMLASAFTIKLPRPGFKPAGWEPPVAAESAAVGAVAPAVTANTVLKTPQFHMLGAVFFSVACGGMGLMSVAKPMMSEVFSSSLPNVVTAAFASQYVQLLSAGNLGGRIGWAAFSDKFGRRLTFNM 447          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A7S1GCY3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCY3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.730e-61
Identity = 119/228 (52.19%), Postives = 148/228 (64.91%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAA--------PA-VQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGAL+FAP    L  +FS++P ++G   +V+    +G+LF   A  L EVV   S+++A+L +DLAEGVYVVGTGSTGAA AL V G  Y   MLASA  I+ PAPGYK  G     A +   A        PA V  NV  +  MKTPQF+ L    F V C G GL SVAKPMM EVFS++LP +VT++FAS YV  L+ G+LGGR+GW  FSD+FGRKLTF +
Sbjct:  193 FGSGALLFAPASTWLANRFSRLPEFVGAASEVTMTSRDGRLFTNVAGELKEVVVATSADVAKLSHDLAEGVYVVGTGSTGAAPALAVMGGAYLATMLASAFAIRRPAPGYKPDGWEPEGAKKADVATSRTMVGTPAPVGGNVHVDQVMKTPQFYSLSTVFFCVACGGMGLMSVAKPMMSEVFSSSLPLIVTSAFASNYVMALSAGNLGGRLGWGMFSDRFGRKLTFNM 420          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A813BUL3_9DINO (OxlT protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BUL3_9DINO)

HSP 1 Score: 206 bits (523), Expect = 2.330e-61
Identity = 114/220 (51.82%), Postives = 148/220 (67.27%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEK-AAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGAL+F P+VN LM+KF K+P YLG   +V+    +GK    +     EVV    +++ARLPY+L EG YVVG+GSTGAA AL   G  Y GIM  +A  I++P PGY V    A + ++ K  AP  + NV  +  MKTPQF+ LG   F +   G GLFSVAKPMM +VFS+ LP++VTASFAS+Y+ M++ G+LGGRIGWAA SDK GR+  FQ+
Sbjct:    6 FGSGALLFTPMVNKLMDKFKKLPEYLGPQGEVNVENRDGK----SGGQFKEVVLATKADIARLPYELQEGWYVVGSGSTGAAPALAAMGLTYLGIMGWAAYNIRTPYPGYTVETSAAENENKNKYVAPVPKGNVDMDTVMKTPQFYLLGTVFFCLASGGMGLFSVAKPMMADVFSSALPSIVTASFASSYILMMSSGNLGGRIGWAALSDKIGRRRVFQL 221          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A7S0STR4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR4_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.770e-59
Identity = 116/221 (52.49%), Postives = 154/221 (69.68%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYD-LAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSAS-EEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGAL+F P V  LM+KF+K+PTYLG +D  +T   +GKLFA  +  L+EVVS   SELA+L Y  L+EG+YVVG+GSTGAA AL + GA Y  IML SA+TIK P P Y   G+   S + + K A A   +V+ + AMK  QF+ LG++ F +   G G+FSVAKPMM EVFS+ LP +VT++FA+ ++ ML+ G+LGGR+ WA+ SD  GR+ TF I
Sbjct:  211 FGSGALIFTPAVQYLMKKFAKLPTYLGPIDSYTTTAIDGKLFANVSGQLIEVVSAGQSELAKLSYTGLSEGLYVVGSGSTGAAEALAIMGASYFAIMLTSALTIKRPHPSYVPEGMVVSSNTVDTKPAVAAVADVSVDDAMKLNQFYFLGLSFFCLSTGGMGMFSVAKPMMNEVFSSVLPAIVTSAFATNFLLMLSAGNLGGRLAWASISDIIGRRNTFYI 431          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: UPI000C782FD4 (uncharacterized protein LOC111700759 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C782FD4)

HSP 1 Score: 189 bits (479), Expect = 5.100e-53
Identity = 109/220 (49.55%), Postives = 143/220 (65.00%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYD-LAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGAL F P++NTL  KFS++PTYLG  + V  V+  GK FA     L EVV   ++ELA+LPYD LAEG Y+V TG+TG A +L   GA+Y  +++ SA+ I+ P PGY   G   PS +   A      NV  +  +KTPQF+ L  T+  +   G GL SVAKPM+  VF++ +P LVT+SFASAY+  +A G+L GR+GWAA SDK GR+ TF I
Sbjct:  213 FGSGALFFTPMMNTLTNKFSQLPTYLG--NSVEVVVEGGKQFATVGGQLKEVVYATTAELAKLPYDGLAEGFYLVNTGNTGVALSLASIGAMYTTMVVGSALLIRRPPPGYIPEGYTPPSVTSGGA------NVHVDTVLKTPQFWFLFTTSTLLATGGMGLMSVAKPMIQNVFTDAMPALVTSSFASAYLMAMAGGNLAGRLGWAAVSDKIGRRNTFHI 424          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A0K2U1R3_LEPSM (Uncharacterized protein n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2U1R3_LEPSM)

HSP 1 Score: 182 bits (461), Expect = 1.550e-50
Identity = 105/220 (47.73%), Postives = 143/220 (65.00%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYD-LAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQI 657
            FGSGAL F P++N  ++ FSK+PTYLG  + V TVM  GK+FAK    L EVV   S++LA+L +  L+EG YVVG+GSTGAA  L   G +YG  ++ S++ I+ PAPGY   G    +A    +      NV  N  +KTPQF+ L  ++  +   G GL SVAKPM+ +VF+ ++P +VT SFAS+Y+  +A G+LGGR+GWAA SDK G + TF I
Sbjct:  192 FGSGALFFTPMMNHFIQTFSKLPTYLG--NSVETVMESGKIFAKVGDELKEVVYATSADLAKLSFSGLSEGFYVVGSGSTGAAEGLMCMGLIYGLTVMGSSLIIRRPAPGYIPEGYDPSTAGGTSS----DLNVHVNDLLKTPQFWLLFSSSTLLCTGGMGLMSVAKPMINDVFATSMPAIVTTSFASSYLMAMAAGNLGGRLGWAAISDKIGCRNTFNI 405          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: UPI000C77E952 (uncharacterized protein LOC111699239 isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77E952)

HSP 1 Score: 179 bits (455), Expect = 1.480e-49
Identity = 105/219 (47.95%), Postives = 137/219 (62.56%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYD-LAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQ 654
            FGSGAL F P VNTL EKF+K+P YLG  + +  V+  G+ F K    L EVV   +++L +LPY  L+EG Y+VG+GSTG A +L + GALY   +L SA+ IK PA G+   G   P+ +          NV  +  ++TPQF+ L  T   +   G GL SVAKPM+  VF+ ++P LVT  FASAY+  LA G+LGGRIGWAA SD+ GR  TFQ
Sbjct:  211 FGSGALFFTPAVNTLCEKFAKLPVYLG--NSIDVVVEGGRQFTKIGDNLQEVVFATTNDLVKLPYQGLSEGFYLVGSGSTGVATSLAILGALYTSTILTSALLIKKPADGFLPKGYTPPATAGSGI------NVPVDNLLRTPQFWLLFSTASLLATGGMGLMSVAKPMIQNVFAGSMPNLVTPGFASAYLMALAAGNLGGRIGWAAVSDRVGRWNTFQ 421          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A349QFA8_9HYPH (MFS transporter (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A349QFA8_9HYPH)

HSP 1 Score: 166 bits (420), Expect = 7.450e-46
Identity = 94/218 (43.12%), Postives = 134/218 (61.47%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQ 654
            FG GA++ APL+ +L++ FS  PTYLGT   +S +   G+ FA+TA+G VEVV  +++E A++      GVYVVGTG+TGAAA     G +Y  +M+ +A   + PA  +K  G   P+ +E        NNV  + A+KTPQF+ L +   F    G G+  VAK MMGE+F  TLP +VTA+FA  YV M+++ ++ GR  WA+ SD  GRK T+ 
Sbjct:  173 FGGGAMIGAPLIASLLKTFSTAPTYLGTEGSLSIITEGGRRFAQTATGKVEVVIASAAEAAKMAVPGDAGVYVVGTGNTGAAATFLTLGIVYFSVMMIAAFCYRVPAKDWKPEGWTPPAKAESAKRMITSNNVHIDQALKTPQFWLLWIVLCFNVTAGIGVIGVAKTMMGEIFGTTLPGVVTATFAGTYVLMISVFNMCGRFFWASMSDFIGRKNTYH 390          
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Match: A0A285PCH6_9HYPH (Major Facilitator Superfamily protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A285PCH6_9HYPH)

HSP 1 Score: 165 bits (417), Expect = 3.000e-44
Identity = 94/218 (43.12%), Postives = 133/218 (61.01%), Query Frame = 1
Query:    1 FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLVEVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASAMTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVTNFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGGRIGWAAFSDKFGRKLTFQ 654
            FG GA++ APL+  L++ FS  PTYLGT   +S +   G+ FA+TA+G VEVV  +++E A++      GVYVVGTG+TGAAA     G +Y  +M+ +A   + PA  +K  G   P+ +E        NNV  + A+KTPQF+ L +   F    G G+  VAK MMGE+F  TLP +VTA+FA  YV M+++ ++ GR  WA+ SD  GRK T+ 
Sbjct:  173 FGGGAMIGAPLIAFLLKTFSTAPTYLGTEGSLSIITEGGRRFAQTATGKVEVVIASAAEAAKMAVPGDAGVYVVGTGNTGAAATFLTLGIVYFSVMMIAAFCYRVPAKDWKPEGWTPPAKAESAKRMITSNNVHIDQALKTPQFWLLWIVLCFNVTAGIGVIGVAKTMMGEIFGTTLPGVVTATFAGTYVLMISVFNMCGRFFWASMSDFIGRKNTYH 390          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15562.4133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Y2_ECTSI7.670e-14299.54Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
A0A835Z4T5_9STRA2.600e-8062.10Major facilitator transporter n=1 Tax=Tribonema mi... [more]
A0A7S1GCY3_9STRA1.730e-6152.19Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A813BUL3_9DINO2.330e-6151.82OxlT protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S0STR4_9STRA1.770e-5952.49Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
UPI000C782FD45.100e-5349.55uncharacterized protein LOC111700759 n=1 Tax=Euryt... [more]
A0A0K2U1R3_LEPSM1.550e-5047.73Uncharacterized protein n=3 Tax=Lepeophtheirus sal... [more]
UPI000C77E9521.480e-4947.95uncharacterized protein LOC111699239 isoform X1 n=... [more]
A0A349QFA8_9HYPH7.450e-4643.12MFS transporter (Fragment) n=1 Tax=Hyphomicrobiale... [more]
A0A285PCH6_9HYPH3.000e-4443.12Major Facilitator Superfamily protein n=2 Tax=Hyph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15562contigEcto-sp13_S_contig15562:432..3905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score421.0
Seed ortholog evalue3.4e-115
Seed eggNOG ortholog2880.D7G7Y2
Model size657
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Major Facilitator Superfamily
EggNOG OGs2QWN5@2759,COG0477@1
Cds size657
COG Functional cat.EGP
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462824.8930032-CDS-Ecto-sp13_S_contig15562:431..5151681462824.8930032-CDS-Ecto-sp13_S_contig15562:431..515Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15562 432..515 -
1681462824.9032674-CDS-Ecto-sp13_S_contig15562:1178..13611681462824.9032674-CDS-Ecto-sp13_S_contig15562:1178..1361Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15562 1179..1361 -
1681462824.914567-CDS-Ecto-sp13_S_contig15562:2136..22611681462824.914567-CDS-Ecto-sp13_S_contig15562:2136..2261Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15562 2137..2261 -
1681462824.9243023-CDS-Ecto-sp13_S_contig15562:3184..33561681462824.9243023-CDS-Ecto-sp13_S_contig15562:3184..3356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15562 3185..3356 -
1681462824.9329338-CDS-Ecto-sp13_S_contig15562:3812..39051681462824.9329338-CDS-Ecto-sp13_S_contig15562:3812..3905Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15562 3813..3905 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15562.4133.1prot_Ecto-sp13_S_contig15562.4133.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15562 432..3905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15562.4133.1

>prot_Ecto-sp13_S_contig15562.4133.1 ID=prot_Ecto-sp13_S_contig15562.4133.1|Name=mRNA_Ecto-sp13_S_contig15562.4133.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
FGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAKTASGLV
EVVSVNSSELARLPYDLAEGVYVVGTGSTGAAAALGVCGALYGGIMLASA
MTIKSPAPGYKVPGLPAPSASEEKAAPAVQNNVAPNVAMKTPQFFGLGVT
NFFVGCTGFGLFSVAKPMMGEVFSNTLPTLVTASFASAYVQMLALGSLGG
RIGWAAFSDKFGRKLTFQI
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mRNA from alignment at Ecto-sp13_S_contig15562:432..3905-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15562.4133.1 ID=mRNA_Ecto-sp13_S_contig15562.4133.1|Name=mRNA_Ecto-sp13_S_contig15562.4133.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3474bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15562:432..3905- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCGGATCGGGAGCGCTGGTGTTCGCACCTCTGGTCAACACCCTGATGGA GAAGTTTTCCAAGATGCCGACGTATCTCGGCACGATGGACCAGGTGCGAA GATTTCGCTCCGTTCCTGAGAGGGTTCCTAGGACCGTTCCTTGCTTGCCG GGTGTCGTCGGAAACGTTCACGGCGGTATTGCTTGACGACTAAACCGAAA ACAGTGATTGCGTGTGAGGAGTCTTCATTTCACGTAGGATGTAGAGTGCT CTTTGGTCTATTAGTCGGTATGGGTAACGAAGAAGTCAAGCAACGTGGAA ATTGGCGCTGCACTCGATAGGGAAAGATGGTTGCGAGGTTTCCGAACGGA ATAGGGTACAACGATGCCAACCAGTGGCCAACTGGTCCTCATGTCGCTGG CCTAGACTGGAATGGTTCTTCCCTTTCTTATCTTGTGGAAACCCGCGCCT TCCGCCCCTCCCGTTGTGCTTCCTGGATTTGAACGTCATCAGAAACTTAA TTTGCCGGTTGCGTACGTACTACCGTGCATACATGCCCGTTTTCCGCAGG TGTCCACTGTCATGAACGAGGGGAAGCTGTTCGCGAAGACGGCTTCGGGG TTGGTAGAAGTGGTATCGGTGAACTCGTCGGAGCTCGCCCGCCTCCCGTA CGACCTGGCTGAGGGGGTGTACGTGGTCGGCACGGGGTCGACGGGAGCGG CGGCCGCGCTCGGCGTTTGCGGTGAGGTAGCTCCGCAACTGCTGTGTCTG AAGGGGGTTGGGGGGGGTACTCTTGACATGTTTTGCATGCCTTAGCTGTC AGGCCATTGACCATGCGTCCTCGACAAGACGGAGCAATGTTCCCACGGGG GAGGCGGGGGAGATGAGAATCCCATTCGTTTGTCGCCGTGATCAGTTTTG GCGTTGTTTTTTTGTTGGAAATGCTATTTCGGTGGCAGAGGCTTCCCTTG CGCTTACATGCGGGACAAATCGGGTCTGCGATGAAGCGTTTAGTTTCTCA GGAGATGGCACGGCAGGAGTTCCGCACCCTGCACAGCTTACAAACGTGAC ATCAATTGTTGTACACGTCCGCAAGCTACCCGTTACGGTCGTTGTTTCGA AACTATGTGCGCGCAGGGTTCTGCGCCCTCAGTTGTTTGGAAACACTCTC TTGTGCAGGAAGGATTTTTCACGGGTATTGTTTTGGACGTGTGCATTCGC ACAGCGTTCTGAAGAAATAGTCAGTTGTATTGCACAACAAACACTCCTAT AATACTAAGACCGTGTTGTTGTTGGGCGTGCAAAGAGTAGGGCATGAGGC GTGGAATGATGTTTGTGTAGGAGGCCGTGCATGCACTCCCCAAGTACACG ATGCTGTGTGGGATACCGTGGTGGGTTCTACATGTTACTGGCGAGCTTGT CTGCTGTCCTGACTCACGCCCGCATAGCTGCGTCTCGACTTCGGTTTGCG AAACGCAACCTTTCGTATCTCTTTTCACGTCGAGTTATCGGAAGATGACT CACGTTTCTTCCCCGATTGGTGTGGCTCGGATGCCGCTCCAAGCATGCAC TCCGTACTGTTTAACTCTCCGAGCGTTTGTCTAGAAACGGATCCGGCGCC CCGTCTAACTGCGTCATGCCGGGATGCGCTCACTGCTGTCGCAGGTGCCC TGTACGGAGGAATCATGTTGGCCTCCGCCATGACCATCAAGTCCCCTGCC CCCGGGTACAAGGTGCCCGGGTTGCCCGCCCCTTCGGCGAGCGAGGAGAA GGCGGCTCCGGCAGTCCAGGTAAGGAATGGCAAATGTTGTGACACGGCTC CTTCCGCCCAGGTTTGGGCATTGTGGTGGTCTCTGTAAATGGCGGGTAGC CCTGCGGTATACGGGGCCAGTGACGTAGCATGGTCAGATGGGAAATACGT GGAATTTATTTCATTCTCTGAATAGTGCCGGTACCCCGTAGGGCGGACTA AGTCCCTTGGTACAATGGAGCCTTATACATGTGCAGGAACCGCTACTGCG ATTATGAGGTCTCTTGCTATTTTGATGTTGCTGAATACCAAGCGTCCAAA CTGTCGGTGGGGTGAACTGGCGGGATGTATGTGTGGTGTTCTGGTGCGCA AGTTCTCACAGTCCGGTCGTTTTTTTTTGTTTTTTGTTCGACTGCTGAGG GGTCTCGACGGCTCAACACGGAAAGCATGCGTTGCTGGTTGATACCTGCA CCTCTGAGCATGACGGCTGAATTGATTGTGGGAGATGAAACGAGCCATAG CGCCCTAGAAGATATCATGCTGTGCCTCTATCCCGACCCCGCCGGCATGC ATGCATGTCCTTGGTCTACACACCAATGCGGTGTTCAAATGTGTTGTCCT TTTAAGAGAGGTCCTGCAGATGAGATTTAGTGACGGACAACGTTGGGCAG CAAACTTGCCCTCGAGGAGATGCAAGGCTGGTGGCAGCGACGATCCGCAG CTCCTTTTCCTCAACTTCTGTACAACTGAAACCGTGTTCTCGACATGCTT CCCGCTCGCCCCTCCCCCCCTCCCCCCCCTCCTCCTCGCAACAGAACAAC GTTGCTCCCAACGTGGCGATGAAGACACCGCAGTTCTTCGGCCTCGGCGT GACGAACTTCTTCGTGGGATGCACCGGTTTCGGGCTGTTCAGTGTGGCCA AGCCCATGATGGGGGAGGTGTTCAGCAACACGCTGCCCACCCTCGTGACG GCGAGCTTCGCCTCCGCGTACGTCCAGGTGAGGTCGCCGTGCTGTGGATC CTGGAGCACTACGAGGGTTAGGGGAGGGTCGGGGATCGAAAAAATGATCA ACTCAAAATTAGTTGAAAATACGTATGCATGTAAGAAAAACCGATTTCGG CCTTTATGGTACGAGCTTTTCGGGCGGTTAACCGCCGCGGCCAGCCCAAA TAATTCAAGCCAGGGAGCACGCAGACTGTGTTTTTCGTGCGTAGCACCTG TCCGAGTTGAGGTGTGCGATGTACTGGGTGCTGCCGGGCTATGATATTCC CCGGCCTCGAGCCCACGCTAAACTGCCAAGCGTTTAGTGGCGTGACGATG TGGCCGGGGGGGTGGTGTGGTCAAACAAACGAATGCATTGGTCATGAACA CCGTTGACTTGGCCTCCCTAGAGCGCCGGGATGTGGCGACATGTCCTTTT TTCGCTGGCCCAGGCTGCGTGAACCAGACGTGACTGGCGGCATGTAATGT CCCTGTGCGGGGGTGTCTGAAACATCCATCCATCGCTCGTTTTGTCATGC CGTGAGATGGCAAGCTGTTGAGAACTGCTGTGGCTCTCCCACCGGACGCT TTTTTGTTTGTAGCCTGACAGTGTTCAAGGCGACTGTATTATGGTGAGTT GTGTCATTCAGCCTCTTCTGCTGTGCTTGACTTTCCGCAGATGCTGGCGC TGGGGAGCCTGGGTGGCCGAATCGGATGGGCAGCATTCTCGGACAAGTTC GGGAGGAAGCTGACCTTCCAGATT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15562:432..3905-

>mRNA_Ecto-sp13_S_contig15562.4133.1 ID=mRNA_Ecto-sp13_S_contig15562.4133.1|Name=mRNA_Ecto-sp13_S_contig15562.4133.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15562:432..3905- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCGGATCGGGAGCGCTGGTGTTCGCACCTCTGGTCAACACCCTGATGGA
GAAGTTTTCCAAGATGCCGACGTATCTCGGCACGATGGACCAGGTGTCCA
CTGTCATGAACGAGGGGAAGCTGTTCGCGAAGACGGCTTCGGGGTTGGTA
GAAGTGGTATCGGTGAACTCGTCGGAGCTCGCCCGCCTCCCGTACGACCT
GGCTGAGGGGGTGTACGTGGTCGGCACGGGGTCGACGGGAGCGGCGGCCG
CGCTCGGCGTTTGCGGTGCCCTGTACGGAGGAATCATGTTGGCCTCCGCC
ATGACCATCAAGTCCCCTGCCCCCGGGTACAAGGTGCCCGGGTTGCCCGC
CCCTTCGGCGAGCGAGGAGAAGGCGGCTCCGGCAGTCCAGAACAACGTTG
CTCCCAACGTGGCGATGAAGACACCGCAGTTCTTCGGCCTCGGCGTGACG
AACTTCTTCGTGGGATGCACCGGTTTCGGGCTGTTCAGTGTGGCCAAGCC
CATGATGGGGGAGGTGTTCAGCAACACGCTGCCCACCCTCGTGACGGCGA
GCTTCGCCTCCGCGTACGTCCAGATGCTGGCGCTGGGGAGCCTGGGTGGC
CGAATCGGATGGGCAGCATTCTCGGACAAGTTCGGGAGGAAGCTGACCTT
CCAGATT
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