prot_Ecto-sp13_S_contig15555.4131.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15555.4131.1
Unique Nameprot_Ecto-sp13_S_contig15555.4131.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15555.4131.1 vs. uniprot
Match: D8LQP3_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP3_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 7.950e-75
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0 
Query:   21 RYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPRGWNWSEDSIAKAMRLFGPKRAFEDKCGAGVKQMSLAEVEMVRLHYGAFMRHLGYRFIKK 137
            RYMY KSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALP GWNWSEDSIAKAMRLFGPK AFEDKCGAGV+QMS+AEVEMVRLHYGAFMRHLGYRFIKK
Sbjct:  316 RYMYKKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPGGWNWSEDSIAKAMRLFGPKTAFEDKCGAGVRQMSVAEVEMVRLHYGAFMRHLGYRFIKK 432
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BLAST of mRNA_Ecto-sp13_S_contig15555.4131.1 vs. uniprot
Match: A0A6H5KN31_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN31_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.910e-59
Identity = 90/116 (77.59%), Postives = 103/116 (88.79%), Query Frame = 0 
Query:   21 RYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPRGWNWSEDSIAKAMRLFGPKRAFEDKCGAGVKQMSLAEVEMVRLHYGAFMRHLGYRFIK 136
            RYM  K+  +R+YLP+WQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRIL+ LP GWNWSE+SIA+AM LFGPK+ F+ KCGAGV + SLAEVEMVR HYGA+MRH GYRF++
Sbjct:  310 RYMAGKAPCLRDYLPVWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILNTLPGGWNWSEESIARAMSLFGPKKPFKQKCGAGVPRASLAEVEMVRRHYGAYMRHFGYRFVE 425
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BLAST of mRNA_Ecto-sp13_S_contig15555.4131.1 vs. uniprot
Match: A0A6H5KVH5_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.780e-42
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0 
Query:   21 RYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPRGWNWSEDSIAKAMR-LFGPKRAF 100
            RYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALP GWNWSEDSIAKAMR +  P+ +F
Sbjct:  316 RYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPGGWNWSEDSIAKAMRQVVRPQESF 396
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BLAST of mRNA_Ecto-sp13_S_contig15555.4131.1 vs. uniprot
Match: A0A835YVS2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS2_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.970e-35
Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0 
Query:   30 VREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPRGWNWSEDSIAKAMRLFGPKRAFEDKCGAGVKQMSLAEVEMVRLHYGAFMRHLGY 132
            +R++LP+W GHL+HWVA   D+PI  FRYED+L RA++VL ++L AL  GW WS +SI +A+R +GP+  FEDKCG  +   +LAEVEMVR HY   +   GY
Sbjct:  188 LRKWLPVWAGHLTHWVADTRDLPIIAFRYEDLLWRADKVLEQVLRALGPGWEWSRESIERAVRTYGPREPFEDKCGKAIPHYTLAEVEMVRKHYAGLLGRFGY 290
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BLAST of mRNA_Ecto-sp13_S_contig15555.4131.1 vs. uniprot
Match: D8LQP4_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP4_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 9.060e-32
Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 0 
Query:   21 RYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPRGWNWSEDSIAKAM 91
            RYM  K+  +R+YLP+WQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRIL+ LP GWNWSE+SIA+AM
Sbjct: 1045 RYMAGKAQCLRDYLPVWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILNTLPGGWNWSEESIARAM 1115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15555.4131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQP3_ECTSI7.950e-7595.73Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6H5KN31_9PHAE1.910e-5977.59Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6H5KVH5_9PHAE1.780e-4290.12Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A835YVS2_9STRA4.970e-3553.40P-loop containing nucleoside triphosphate hydrolas... [more]
D8LQP4_ECTSI9.060e-3281.69F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 15..129
e-value: 5.4E-9
score: 37.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 33..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15555contigEcto-sp13_S_contig15555:1105..3183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15555.4131.1mRNA_Ecto-sp13_S_contig15555.4131.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15555 317..3820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15555.4131.1 ID=prot_Ecto-sp13_S_contig15555.4131.1|Name=mRNA_Ecto-sp13_S_contig15555.4131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MPQRDQLKEAPLVSVSYAVPRYMYHKSIVVREYLPLWQGHLSHWVAAAGD
IPIYVFRYEDMLLRAEEVLRRILHALPRGWNWSEDSIAKAMRLFGPKRAF
EDKCGAGVKQMSLAEVEMVRLHYGAFMRHLGYRFIKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase