mRNA_Ecto-sp13_S_contig1555.4129.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A6H5JWN1_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN1_9PHAE) HSP 1 Score: 283 bits (723), Expect = 1.870e-93 Identity = 141/154 (91.56%), Postives = 144/154 (93.51%), Query Frame = 1
Query: 1 MMDVKGTETETLEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTELADDGSATARPEPSPPTVS 462
MMDVKG ETET E+KQSSIP AGQGLFAREHFTAGAVVCEYTGRQLRTVEALR+PDKSYLMRLGPQ VYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQE KALVVALKDIQPGQEIFVDYGRWYWLSLKPTEL DDG+ATA EPS P VS
Sbjct: 1 MMDVKGIETETFEIKQSSIPGAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRAPDKSYLMRLGPQ-VYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQECKALVVALKDIQPGQEIFVDYGRWYWLSLKPTELGDDGNATATLEPSSPNVS 153
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: D7G0I6_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I6_ECTSI) HSP 1 Score: 175 bits (444), Expect = 4.780e-52 Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 1
Query: 181 MRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTELADDGSATARPEPSPPTVS 462
MRLGPQ VYVDALDHPEVMARYINDCRNS LYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPT+L DDGSATAR EP PP VS
Sbjct: 1 MRLGPQ-VYVDALDHPEVMARYINDCRNSWLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTKLGDDGSATARLEPRPPDVS 93
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A814YM84_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814YM84_9BILA) HSP 1 Score: 144 bits (364), Expect = 1.480e-39 Identity = 74/125 (59.20%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 34 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTEL 408
LEVK S I AG GLF R G+ VC Y G+ LRT+EA+R DKSYLMRLGPQ VYVD D V+ RYIND RN L NV F K P+E A V+A +DI G+EIF DYGRWYWL+ PT L
Sbjct: 4 LEVKPSQIEGAGSGLFTRTPIAKGSCVCIYRGKILRTIEAIRLKDKSYLMRLGPQ-VYVDPCDDKTVLGRYINDPRNRLLQNVVFDKRPEEQCAHVIAKRDIATGEEIFADYGRWYWLTKTPTRL 127
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A485LJI3_9STRA (Aste57867_21405 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJI3_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.900e-39 Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 34 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPT 402
+E + S +P+AG GLFA + FT V+CEY G L T EAL DKSYLMRLG VYVDA D +VMARYINDCR+ ++NV F K P++ ALV AL DI+PG+E+F DYGRWYWL+ T
Sbjct: 26 VEARTSQLPNAGAGLFATKAFTKNDVICEYRGEVLGTKEALHVGDKSYLMRLG-NGVYVDARDSLDVMARYINDCRSKGVHNVVFDKQPEQQVALVRALHDIEPGEELFADYGRWYWLAYNMT 147
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A816DKB5_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A816DKB5_9BILA) HSP 1 Score: 143 bits (361), Expect = 4.290e-39 Identity = 73/125 (58.40%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 34 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTEL 408
LEVK S I AG GLF R G+ VC Y+G+ LRTV+A+R DKSYLMRLGPQ VYVD D V+ RYIND RN L NV F K P+E A V+A +DI G+EIF DYGRWYWL+ P L
Sbjct: 4 LEVKSSQIEGAGCGLFTRTPIAKGSCVCIYSGKVLRTVDAIRLKDKSYLMRLGPQ-VYVDPFDDKTVLGRYINDPRNRLLQNVIFDKRPEEQCAYVIAKRDIAAGEEIFADYGRWYWLTTTPNRL 127
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A7S2SN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN98_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.260e-38 Identity = 73/125 (58.40%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 40 VKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTELAD 414
V+ S IP AG GLFA + F AG++VC YTG L T EA+R DK+YLMRLGPQ VYVDA ++ARYINDCRN N F K P + +ALVVAL+D+ PG+EIFVDYG+ YW + PT+L+D
Sbjct: 1 VRPSGIPGAGSGLFAAKRFHAGSLVCVYTGEVLATREAIRLQDKAYLMRLGPQ-VYVDAAKDTTILARYINDCRNFRATNATFVKQPDQHRALVVALRDLSPGEEIFVDYGKRYWAAGAPTKLSD 124
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A812NC81_9DINO (EHMT2 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812NC81_9DINO) HSP 1 Score: 143 bits (360), Expect = 1.800e-38 Identity = 68/129 (52.71%), Postives = 91/129 (70.54%), Query Frame = 1
Query: 25 TETLEVKQSSIPS-AGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTEL 408
++ LEV S + + AG GLF ++ G V+CEY GR T EA+R DKSYLMR+GPQ+ Y+DA + ++ARYINDCRN ++YNV+F K P E +ALVVA + I G+E+FVDYGRWYW L+P +
Sbjct: 15 SKALEVAPSQLGAEAGLGLFVQQAVEPGEVLCEYRGRTFATAEAMRLEDKSYLMRVGPQE-YIDAREDTSLVARYINDCRNPAVYNVSFEKRPGEGRALVVACRPISAGEELFVDYGRWYWAKLRPVRI 142
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A813QZY1_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A813QZY1_ADIRI) HSP 1 Score: 140 bits (354), Expect = 4.610e-38 Identity = 70/125 (56.00%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 34 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTEL 408
LEVK S IP AG GL+ R + VC YTG+ LRT++A+R DK+YLMRLGPQ VYV+ D ++ RYIND RN L+NV F K P E A V+A +DI G+EIF DYGRWYWL PT L
Sbjct: 4 LEVKPSQIPGAGSGLYTRNPIAKDSCVCVYTGQVLRTIDAIRLEDKTYLMRLGPQ-VYVNPHDDKSMLGRYINDPRNRLLHNVLFDKRPDEQCAYVIAKRDIACGEEIFADYGRWYWLGKTPTRL 127
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: A0A819EJ67_9BILA (Elongation of very long chain fatty acids protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A819EJ67_9BILA) HSP 1 Score: 147 bits (372), Expect = 1.130e-37 Identity = 74/125 (59.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 34 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCRNSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLSLKPTEL 408
LE+KQS IP AG GLF R + + VC YTG+ LRT++A+R DKSYLMRLGPQ VYVD D V+ARYIND RN L NV F K P E A ++A +DI G+EIF DYGRWYWL PT L
Sbjct: 279 LEIKQSQIPGAGCGLFTRIPISKDSCVCIYTGKVLRTIDAIRREDKSYLMRLGPQ-VYVDPCDDTTVLARYINDPRNRLLQNVIFDKRPDEQCAYIIAKRDIAAGEEIFADYGRWYWLKKTPTRL 402
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Match: H3GV72_PHYRM (SET domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GV72_PHYRM) HSP 1 Score: 139 bits (350), Expect = 2.960e-37 Identity = 71/120 (59.17%), Postives = 91/120 (75.83%), Query Frame = 1
Query: 34 LEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEALRSPDKSYLMRLGPQQVYVDALDHPEVMARYINDCR-NSSLYNVAFRKLPQESKALVVALKDIQPGQEIFVDYGRWYWLS 390
+EV+ S+IP AG+GLFA G++VCEYTG L EA + PDKS+LM+LG + Y+DAL+ PEV+ARYINDCR + +NV F K PQE KALVVA++DI+ G+EIFVDYGR YWL+
Sbjct: 19 VEVRDSTIPGAGKGLFATRKHPQGSIVCEYTGVVLPNREAWKLPDKSFLMKLGDGK-YIDALNCPEVLARYINDCRGHRGGFNVHFDKRPQEDKALVVAMRDIRLGEEIFVDYGRLYWLA 137 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1555.4129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1555.4129.1 >prot_Ecto-sp13_S_contig1555.4129.1 ID=prot_Ecto-sp13_S_contig1555.4129.1|Name=mRNA_Ecto-sp13_S_contig1555.4129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp MMDVKGTETETLEVKQSSIPSAGQGLFAREHFTAGAVVCEYTGRQLRTVEback to top mRNA from alignment at Ecto-sp13_S_contig1555:7288..10624- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1555.4129.1 ID=mRNA_Ecto-sp13_S_contig1555.4129.1|Name=mRNA_Ecto-sp13_S_contig1555.4129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3337bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1555:7288..10624- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1555:7288..10624- >mRNA_Ecto-sp13_S_contig1555.4129.1 ID=mRNA_Ecto-sp13_S_contig1555.4129.1|Name=mRNA_Ecto-sp13_S_contig1555.4129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=468bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1555:7288..10624- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |