prot_Ecto-sp13_S_contig15537.4121.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15537.4121.1
Unique Nameprot_Ecto-sp13_S_contig15537.4121.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length435
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15537.4121.1 vs. uniprot
Match: D7G5K8_ECTSI (Scaper protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K8_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.760e-119
Identity = 304/346 (87.86%), Postives = 312/346 (90.17%), Query Frame = 0 
Query:    1 AVETTTERSNADAIARVAAVGSGNDGCADSRNKGEKSDSPPQREEGAAQDGERNNIPPLGRDQYHHSADNNWEVVVAGVREHYDEGTGRKQGGDDDEEGEESDVDXXXXXXXXXDPDSAYVDAMEKIWAEAEAXXXXXXXXXXXAWARLPTDVTCCPSEYVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKTGLVSLPFAPGAESGSDVPLRRQSSGGICSRRTVMGAHAGVRQGAVGGSDDDADELLDLEIEIPVPGEAEEERVGAAVGDIERFAGNGKEEA-LRQRVNTLASEDADVENASLHSWYQAGDRPDLDSEE 345
            AVETTTE SNADA+A VAAVGS NDG ADSRNKGEKSDSPP  E+GA QDGE NNIPPLGRDQ HHSADN  EVVVAGVRE  DEGTGRKQ GD           XXXXXXXXX PDSAYVDAMEKIWAEAEAXXXXXXXXXXXAWARLPTDVTCCPSE  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKTG+VSLPFAPGAE+GSDVPLRRQSSGGIC RRT MGA+AGVRQGAVGGSDDD DELLDLEIEIPVPGEAEEERVGAAVGDIERFAG+G+EE  LRQRVNTLASEDADVENASLHSWYQA DRPDLDSE+
Sbjct:  737 AVETTTEGSNADAVASVAAVGSRNDGGADSRNKGEKSDSPPHCEKGATQDGETNNIPPLGRDQCHHSADNYREVVVAGVRERDDEGTGRKQEGDXXXXXXXXXXXXXXXXXXXXXPDSAYVDAMEKIWAEAEAXXXXXXXXXXXAWARLPTDVTCCPSESEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKTGVVSLPFAPGAENGSDVPLRRQSSGGICGRRTAMGANAGVRQGAVGGSDDDVDELLDLEIEIPVPGEAEEERVGAAVGDIERFAGDGEEEGELRQRVNTLASEDADVENASLHSWYQASDRPDLDSED 1082
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BLAST of mRNA_Ecto-sp13_S_contig15537.4121.1 vs. uniprot
Match: A0A6H5JBR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR7_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 1.350e-106
Identity = 278/322 (86.34%), Postives = 288/322 (89.44%), Query Frame = 0 
Query:    1 AVETTTERSNADAIARVAAVGSGNDGCADSRNKGEKSDSPPQREEGAAQDGERNNIPPLGRDQYHHSADNNWEVVVAGVREHYDEGTGRKQGGDDDEEGEESDVDXXXXXXXXXDPDSAYVDAMEKIWAEAEAXXXXXXXXXXXAWARLPTDVTCCPSEYVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKTGLVSLPFAPGAESGSDVPLRRQSSGGICSRRTVMGAHAGVRQGAVGGSDDDADELLDLEIEIPVPGEAEEERVGAAVGDIERFAGNGKEEALRQRVNTLASEDA 322
            AVETTTE SNA+AIA VA VGSGNDGCADSRNKGEKSDSPP+RE GAAQDGE NNIPPLGRDQ H SADNN EVVVAGV E  DEGTGRKQ GD+          XXXXXXXXXDPD AYVDAMEKIWAEAEAXXXXXXXXXXXAWARLPTDVTCCPSEY GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TG+V LP A GAESGSDVPLR QSSGGICSRRTVMGA+AGVRQGAVGGSDDD DELLDLEIE+PVPGEAEEE VGAAVGDIERFAGNG+EEALRQRV TLAS+++
Sbjct:  590 AVETTTEGSNAEAIASVATVGSGNDGCADSRNKGEKSDSPPRRETGAAQDGEINNIPPLGRDQCHPSADNNREVVVAGVGERDDEGTGRKQEGDEXXXXXXXXXXXXXXXXXXXDPDFAYVDAMEKIWAEAEAXXXXXXXXXXXAWARLPTDVTCCPSEYEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGVVLLPLASGAESGSDVPLRSQSSGGICSRRTVMGANAGVRQGAVGGSDDDVDELLDLEIEVPVPGEAEEELVGAAVGDIERFAGNGEEEALRQRVKTLASKES 911
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15537.4121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5K8_ECTSI1.760e-11987.86Scaper protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JBR7_9PHAE1.350e-10686.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15537contigEcto-sp13_S_contig15537:697..3444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15537.4121.1mRNA_Ecto-sp13_S_contig15537.4121.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15537 697..3444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15537.4121.1 ID=prot_Ecto-sp13_S_contig15537.4121.1|Name=mRNA_Ecto-sp13_S_contig15537.4121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=435bp
AVETTTERSNADAIARVAAVGSGNDGCADSRNKGEKSDSPPQREEGAAQD
GERNNIPPLGRDQYHHSADNNWEVVVAGVREHYDEGTGRKQGGDDDEEGE
ESDVDGEEGEEEDEDPDSAYVDAMEKIWAEAEAWVDAEAQAEEEAWARLP
TDVTCCPSEYVGGGGSDIEESTPAAAATKSTADTAGAARSSLDHRRKPPG
RDEDDDDDYAGGAAAEKTGLVSLPFAPGAESGSDVPLRRQSSGGICSRRT
VMGAHAGVRQGAVGGSDDDADELLDLEIEIPVPGEAEEERVGAAVGDIER
FAGNGKEEALRQRVNTLASEDADVENASLHSWYQAGDRPDLDSEEDNDKE
EEEEEETEEAQDEHTSKTTESAAAAAAAEHSAGSKHGDTGNGSTDAHKQA
ERGKGKERGGCHAPSDSPRFPRSPANSPVAEAGHH
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