prot_Ecto-sp13_S_contig15532.4117.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15532.4117.1
Unique Nameprot_Ecto-sp13_S_contig15532.4117.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length350
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15532.4117.1 vs. uniprot
Match: A0A6H5JT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT89_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.360e-60
Identity = 243/326 (74.54%), Postives = 245/326 (75.15%), Query Frame = 0 
Query:    1 DDSGGGKGVLSRKEAGGWRHHERPQHTHYRSELHQHYQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PWXXXXXXRGGGAHRLEDYSSRVVMGPVASPPRVVSSHVDGPMAIVEVAGGGDATGRGGYGPSAAAEE------PYGFYVGGKNKGRDWAT-PAAAAAVQDHAEGAEATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARATPVRSQGRESPKAALMARVAEESRSSAEVEEGRPPEAGRXXXXXXXXXXXXXXXVSANGRRPREG 316
            DDSG GKGVLSRKEAGGWRHHERP HTHYRSELHQHYQY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   PW      RGGG HRLEDYS +VVMGPVASPPRVVSSHV GPMAIVEVAGGGDATGRGGY PSA          PYGFYVGGKNKGR WAT                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARATPVRSQGRESPKAALMARVAEE RSSAEVE GRPP+AGR                SANGRRP EG
Sbjct: 1494 DDSGEGKGVLSRKEAGGWRHHERPPHTHYRSELHQHYQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPAHAAPSSSARRAPSTHPWMIPVGGRGGGTHRLEDYSGQVVMGPVASPPRVVSSHVHGPMAIVEVAGGGDATGRGGYRPSAXXXXXXXXXXPYGFYVGGKNKGRGWATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARATPVRSQGRESPKAALMARVAEECRSSAEVEMGRPPKAGREDGGSDDGGRSGDDTESANGRRPPEG 1819
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BLAST of mRNA_Ecto-sp13_S_contig15532.4117.1 vs. uniprot
Match: D7G3G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G2_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 1.570e-51
Identity = 207/324 (63.89%), Postives = 210/324 (64.81%), Query Frame = 0 
Query:    1 DDSGGGKGVLSRKEAGGWRHHERPQHTHYRSELHQHYQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWXXXXXXRGGGAHRLEDYSSRVVMGPVASPPRVVSSHVDGPMAIVEVAGGGDATGRGGYGPSAAAEEPYGFYVGGKNKGRDWATPAAAAAVQDHAEGAEATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ARATPVRSQGRESPKAALMARVAEESRSSAEVEEGRPPEAGRXXXXXXXXXXXXXXXVSANGRRPREG 316
            D+SGGGKGVLSRKEAGGWRHHERPQHTHYRSELHQHYQY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     PW      RGGG HRLEDYS+RVVMGPVASPPRVVSSHVDGPMAIVEVAGGGDATGRGGYGPS                                        XXXXXXXXXXX                           XXXXXXXXXXXXXX        ARATPVRSQGRESPK ALMARVA+ESRSSAE EEGRPPEAG   XXXXXXXXX     SANGRRPREG
Sbjct: 1573 DESGGGKGVLSRKEAGGWRHHERPQHTHYRSELHQHYQYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAHVAPSSARRAPSTH----PWMMSGGGRGGGVHRLEDYSNRVVMGPVASPPRVVSSHVDGPMAIVEVAGGGDATGRGGYGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSAERQGSPPRHQQQGHGSSVAPARAXXXXXXXXXXXXXXSLPSGGGGARATPVRSQGRESPKTALMARVAQESRSSAEAEEGRPPEAGPEGXXXXXXXXXGDDTESANGRRPREG 1892
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15532.4117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT89_9PHAE1.360e-6074.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3G2_ECTSI1.570e-5163.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15532contigEcto-sp13_S_contig15532:2257..3306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15532.4117.1mRNA_Ecto-sp13_S_contig15532.4117.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15532 2257..3306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15532.4117.1 ID=prot_Ecto-sp13_S_contig15532.4117.1|Name=mRNA_Ecto-sp13_S_contig15532.4117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=350bp
DDSGGGKGVLSRKEAGGWRHHERPQHTHYRSELHQHYQYQQQQQQQQQQQ
QQRQSGGGGGMPMAHHARMLPVPPPPGSHAAPSSSSRRAPSTHPWMMPGG
GRGGGAHRLEDYSSRVVMGPVASPPRVVSSHVDGPMAIVEVAGGGDATGR
GGYGPSAAAEEPYGFYVGGKNKGRDWATPAAAAAVQDHAEGAEATAAAAA
RRSAERRGSPPRHQQQGHGSIVSSARAKTAAAANSSPTPSSPPSGGGGAR
ATPVRSQGRESPKAALMARVAEESRSSAEVEEGRPPEAGREGGGSDDGGR
SGDNTVSANGRRPREGAAEEDEEKLRANGDGGAGQQQEYRKQQQNIKLQR
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