mRNA_Ecto-sp13_S_contig1553.4114.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: D8LRU4_ECTSI (MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU4_ECTSI) HSP 1 Score: 378 bits (970), Expect = 3.900e-127 Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 1
Query: 385 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQN+VD+LEQSIAKAEDNTAANKRK SELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKV RLTQVCKDGVNRWTDNSWCIKSWMVKTKGM GKDVDRYLQIKGDFD V
Sbjct: 1 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTAANKRKFSELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVARLTQVCKDGVNRWTDNSWCIKSWMVKTKGMSGKDVDRYLQIKGDFDLV 202
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: F5BX17_UNDPI (Meiotic nuclear division protein 1 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=F5BX17_UNDPI) HSP 1 Score: 295 bits (754), Expect = 1.550e-94 Identity = 149/202 (73.76%), Postives = 172/202 (85.15%), Query Frame = 1
Query: 385 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
MVK+GLS+EEKR K+L+IYH TK+I+SLKEIEKAASKQGV T+KDVNQSLVDDGLVDMDKIG SNFFWSFPSK V +QNL+DSL++ IAKAED A NKRKI+ L E RADT R+ KL RLQ+N R+++LE EYE+LKENDPAELEKVT + +VCKDGVNRWTDN+W IKSWMVKT+GM G DVD+YLQIK DFD V
Sbjct: 1 MVKKGLSLEEKRAKILNIYHGTKSIFSLKEIEKAASKQGVVSQTIKDVNQSLVDDGLVDMDKIGPSNFFWSFPSKAVVDRQNLIDSLKRDIAKAEDTAAVNKRKIASLVEERADTEERQLKLRRLQDNKQRVKQLESEYETLKENDPAELEKVTNVAEVCKDGVNRWTDNTWSIKSWMVKTRGMSGADVDKYLQIKADFDHV 202
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: A0A7S2XYC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC3_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.250e-61 Identity = 107/201 (53.23%), Postives = 146/201 (72.64%), Query Frame = 1
Query: 391 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEE-GRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
++GLS+EEKR ++L IYHS+ +Y+LKEIEK ASK GV + T+KDVNQSL+DD LVD DKIG++NFFWSFPSKV V K+ ++SL++ I ++ A + K+++LE GR D+ +RRE L +L + R EL++ + LKENDP EL ++ L + K+ VNRWTDN W +KSW VK KGM KDVDRY+Q+ DFD +
Sbjct: 5 RKGLSLEEKRQRILGIYHSSGEVYNLKEIEKIASKAGVVLQTIKDVNQSLIDDHLVDADKIGSANFFWSFPSKVYVVKKTKIESLQKQIEDSKRQLNAAQDKVADLENAGRQDSNTRREGLAKLDQERKRGSELDERLQCLKENDPEELLRLKNLQEEIKEHVNRWTDNIWAVKSWCVKKKGMPSKDVDRYMQLPQDFDYI 205
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: H3HEE5_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3HEE5_PHYRM) HSP 1 Score: 186 bits (473), Expect = 1.190e-52 Identity = 94/202 (46.53%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 385 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
M ++G+S++EKR+++L IYH +K +++LKE+EK SK GV + TVKDVNQ+LVDD LVD DKIG+ N+FWSFPSK++ T++ + LEQ A+D K+ + + + R ++ R +KL RL+E ++Q L + + L ENDP LE++ R ++ K+G +RWTDN + +KSW+VK +G+ GK+VD++L IK DFD V
Sbjct: 1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDVLVDCDKIGSGNYFWSFPSKLSQTRRRKLSELEQRHQTAQDKLVKVKQNVEKQKGLRPESEERVQKLRRLEEQKAKVQVLRTKVQHLAENDPEILEQLERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 202
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: A0A0P1AFA8_PLAHL (Protein involved in meiotic recombination/predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFA8_PLAHL) HSP 1 Score: 183 bits (464), Expect = 2.490e-51 Identity = 92/202 (45.54%), Postives = 142/202 (70.30%), Query Frame = 1
Query: 385 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
M ++G+S++EKR+++L IYH +K +++LKE+EK SK GV + TVKDVNQ+LVDD LVD DKIG+ N+FWSFPSK++ +++ + LEQ ++ K KI E + R+D+ R +KL RL+E ++++ L + L ENDPA LE + + K+G +RWTDN + +KSW+VK +G+ GK+V+++L+I+ DFD V
Sbjct: 1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQCRQARQEKLDRVKEKIEEQQALRSDSDERIQKLKRLEELKVKVESLRNTMQHLAENDPAILEDLECKVGIAKEGADRWTDNVFTLKSWVVKKRGVEGKEVNKWLEIQDDFDYV 202
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: A0A7S3XLC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC7_HETAK) HSP 1 Score: 179 bits (453), Expect = 4.510e-50 Identity = 93/200 (46.50%), Postives = 123/200 (61.50%), Query Frame = 1
Query: 391 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
++G+S EEKR ++L IYH K + +LKE+EK KQGV + ++K+VNQ+LVDD LVD DKIG++NFFWSFPSKVA L GR DT RR +L +LQ+ R L++ ++LKENDP EL ++ T+ CK+ NRWTDN W +KSW +K KGM +VDRYLQ+ DFD V
Sbjct: 5 RKGVSYEEKRTRILGIYHEKKEVLNLKELEKLGVKQGVVVQSIKEVNQALVDDNLVDTDKIGSANFFWSFPSKVAEL----------------------------LGAGRHDTPQRRAQLQKLQDEKAREAALDQRLDTLKENDPRELARIETETEKCKEAANRWTDNIWALKSWCIKKKGMASTEVDRYLQLSSDFDYV 176
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: W7TRE1_9STRA (Meiotic nuclear division protein 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRE1_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.170e-48 Identity = 93/201 (46.27%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 391 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQEN-GLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
++G+S+EEKR +L IYHST A+YSLKE+E ASKQGV +VKDVNQ LVDDGLV+M+K+GASN F++FP K +K+ +LE +A+ + + + + K + L GR D+ RR+ + + L+ ++LE E + K+NDP ++E++ +CK GVNRWTDN + IKS++VK +GM KDVD++L + FD V
Sbjct: 4 RKGMSLEEKRQTILKIYHSTGAVYSLKEMEGLASKQGVVSQSVKDVNQGLVDDGLVEMEKVGASNVFFAFPGKAIASKRTATVNLESEVARLKAHVSTLEEKAAALSAGRQDSEKRRQNMEDYETALALKTKQLE-EVQRFKDNDPVKIERLEAQAALCKQGVNRWTDNIFSIKSYLVKKRGMYSKDVDKFLGLTDSFDYV 203
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: A0A5D6Y0R0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0R0_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.040e-48 Identity = 88/200 (44.00%), Postives = 136/200 (68.00%), Query Frame = 1
Query: 391 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
++G+S+EEKR ++L IYH +K +++LKE+EK +K GV + T+KDVNQ+LVDDGLVD DKIG+ N+FWSFPSK++ ++ + LEQ A A+D A ++ I E + R ++ R KL RL E +++L+ + + L +NDP L ++ R QV K G +RWTDN + ++SW+ + +G +VD++L IK DFD +
Sbjct: 4 RKGVSLEEKRARILHIYHDSKDVFNLKEVEKIGAKAGVVLQTIKDVNQALVDDGLVDCDKIGSGNYFWSFPSKLSQARKRKLGELEQRKAAAQDKLAKVRQSIDEQKSKRTESDDRAAKLQRLAELQASVKDLKAKVQHLADNDPEILAQLERSVQVAKIGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 203
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: A0A4D9D7I4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7I4_9STRA) HSP 1 Score: 176 bits (447), Expect = 9.850e-48 Identity = 97/205 (47.32%), Postives = 139/205 (67.80%), Query Frame = 1
Query: 382 TMVKR-GLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQEN-GLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
TM KR G+S+EEKR +L IYHST A+YSLKE+E ASKQGV +VKDVNQ LVDDGLV+M+K+GASN F++FP K +K+ +LE +A+ + + + + K + L GR D+ RR+ + + L+ ++LE E + K+NDP ++E++ +CK GVNRWTDN + IKS++VK +GM KDVD++L + FD V
Sbjct: 86 TMPKRKGMSLEEKRQTILKIYHSTGAVYSLKEMEGLASKQGVVSQSVKDVNQGLVDDGLVEMEKVGASNVFFAFPGKAIASKRTATVNLESEVARLKAHVSTLEEKAAALSTGRQDSEKRRQNMEDYETALALKTKQLE-EVQRFKDNDPVKIERLEAQAALCKQGVNRWTDNIFSIKSYLVKKRGMYSKDVDKFLGLTDSFDYV 289
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Match: A0A8K1FKH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH2_PYTOL) HSP 1 Score: 173 bits (438), Expect = 1.680e-47 Identity = 87/200 (43.50%), Postives = 135/200 (67.50%), Query Frame = 1
Query: 391 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNLVDSLEQSIAKAEDNTAANKRKISELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSWMVKTKGMGGKDVDRYLQIKGDFDQV 990
K+G+S+EEKR+++L IYH +K +Y++KEIEK +K GV + T+KDVNQ+LVDD LVD DKIG+ N+FWSFPSKV+ ++ + LEQ + + K+++ + + R D+ R KL RL E +++++ + + L +NDPA LE + R QV K G +RWTDN + ++SW+ + +G +VD++L IK DFD +
Sbjct: 5 KKGVSLEEKRERILKIYHESKDVYNIKEIEKLGAKAGVVLQTIKDVNQALVDDALVDFDKIGSGNYFWSFPSKVSQQRKRKLSELEQRKQSTSEQLSKVKQEVEKQKSLRTDSDDRVAKLQRLAELQTHVKDMKAKIQHLADNDPAILEHLERNMQVAKVGADRWTDNVYTVRSWVAQKRGCSTGEVDKWLGIKDDFDYI 204 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1553.4114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1553.4114.1 >prot_Ecto-sp13_S_contig1553.4114.1 ID=prot_Ecto-sp13_S_contig1553.4114.1|Name=mRNA_Ecto-sp13_S_contig1553.4114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQback to top mRNA from alignment at Ecto-sp13_S_contig1553:1209..5525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1553.4114.1 ID=mRNA_Ecto-sp13_S_contig1553.4114.1|Name=mRNA_Ecto-sp13_S_contig1553.4114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4317bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1553:1209..5525- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1553:1209..5525- >mRNA_Ecto-sp13_S_contig1553.4114.1 ID=mRNA_Ecto-sp13_S_contig1553.4114.1|Name=mRNA_Ecto-sp13_S_contig1553.4114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1553:1209..5525- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |