mRNA_Ecto-sp13_S_contig15528.4113.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15528.4113.1
Unique NamemRNA_Ecto-sp13_S_contig15528.4113.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: D7FZD1_ECTSI (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD1_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 1.170e-114
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKR+SEEAELDDAVHTALLTMREGFEGEMTEKNIE
Sbjct:   40 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 209
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A835Z0F7_9STRA (20S proteasome subunit alpha 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F7_9STRA)

HSP 1 Score: 296 bits (758), Expect = 6.010e-100
Identity = 145/170 (85.29%), Postives = 159/170 (93.53%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            ATNGVVI TEKKLP+VL+D  +V+KI+LVTPSTGFVYSGLGPDYRVL R SRK+AQ Y+N YRE+QPV QLVRDTAGVMQEYTQ GGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKA+AIGKNF+NAK+FLEKRY++E ELDDA+HTALLTMREGFEGEMTE NIE
Sbjct:   40 ATNGVVIATEKKLPTVLVDEKDVAKINLVTPSTGFVYSGLGPDYRVLVRTSRKKAQGYFNTYRELQPVSQLVRDTAGVMQEYTQSGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKASAIGKNFLNAKSFLEKRYNDEMELDDAIHTALLTMREGFEGEMTEHNIE 209
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: W7TKE3_9STRA (Proteasome subunit alpha type 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKE3_9STRA)

HSP 1 Score: 284 bits (727), Expect = 3.250e-95
Identity = 142/170 (83.53%), Postives = 154/170 (90.59%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            ATNGVVI TEKKLPSVLID   V KI L+ PSTGFV+SGLGPDYRVL RKSRK+AQ+Y+  YRE QPVGQLVRDTAGVMQE+TQ GGVRPFG+SLLVAGYDD+GPQL+QVDPSGAYFGW+ATAIGKN VNAKNFLEKRY+EE ELDDAVHTALLT+REGFEGEM E NIE
Sbjct:   41 ATNGVVIATEKKLPSVLIDEAHVQKIELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYFLQYREHQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWQATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNESNIE 210
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A7S1BSA3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSA3_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.040e-91
Identity = 130/170 (76.47%), Postives = 150/170 (88.24%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            A +GVVI T+KK+ S L+D+D V ++  +TPSTGFVYSG+GPDYRVL RK+RK +Q+YY  YREVQPVG LV+ TAGVMQEYTQ GGVRPFGVSLLVAGYDDDGP LYQVDPSGAYFGW+ATAIGKN++NAKNFLEKRY EE EL+DA+HTALLT+REGFEGEM  +NIE
Sbjct:   40 AKDGVVIATDKKIASALVDTDHVGRVEEITPSTGFVYSGVGPDYRVLVRKARKSSQSYYRTYREVQPVGALVKQTAGVMQEYTQSGGVRPFGVSLLVAGYDDDGPHLYQVDPSGAYFGWRATAIGKNYINAKNFLEKRYQEEMELEDAIHTALLTLREGFEGEMNGRNIE 209
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A6U1Q5Y5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q5Y5_9STRA)

HSP 1 Score: 271 bits (692), Expect = 1.610e-90
Identity = 132/167 (79.04%), Postives = 148/167 (88.62%), Query Frame = 1 
Query:   10 GVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            GVVI TEKKL S L+D  +V K +++TP+TG VYSG+GPDYRVL RKSRK+AQAYY +Y EVQPV QLV++ AGVMQE+TQ GGVRPFGVSLLVAGYDDDGPQL+QVDPSGAYFGWKA+AIGK +VNAKNFLEKRYSE+ ELDDAVHTALLTMRE FEGEM E NIE
Sbjct:    1 GVVIATEKKLGSPLVDETQVQKTAMITPTTGLVYSGVGPDYRVLVRKSRKRAQAYYRVYHEVQPVAQLVKEMAGVMQEFTQSGGVRPFGVSLLVAGYDDDGPQLFQVDPSGAYFGWKASAIGKGYVNAKNFLEKRYSEDMELDDAVHTALLTMRESFEGEMNENNIE 167
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A6T7HTC8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HTC8_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.040e-85
Identity = 130/175 (74.29%), Postives = 152/175 (86.86%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYD-DDG----PQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            AT+GVVI T+KKL S L+D+D+VSK+  +TPS+GFVYSG+GPDYRVL RK+RK +QAYY  YRE QP+ QLV+ TAGVMQEYTQ GGVRPFGVSLLVAG D ++G    P+LYQVDPSGAYFGWKATAIGKN+VNAKNFLEKRY E+ EL+DA+HTALLT+REGFEGEMT  NI+
Sbjct:   40 ATDGVVIATDKKLTSPLVDTDQVSKVEAITPSSGFVYSGVGPDYRVLVRKARKSSQAYYREYRETQPITQLVKGTAGVMQEYTQSGGVRPFGVSLLVAGIDIEEGGKKVPRLYQVDPSGAYFGWKATAIGKNYVNAKNFLEKRYQEDIELEDAIHTALLTLREGFEGEMTAHNIQ 214
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A7S0C5Z3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5Z3_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.890e-85
Identity = 129/171 (75.44%), Postives = 148/171 (86.55%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDG-PQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            A +GVVI T+KKL S L+D ++V+K+  VT S+GFVYSG+GPDYRVL +K+RK +QAYY  YRE QPV QLV+ TAGVMQEYTQ GGVRPFGVSLLVAG D DG P+LYQVDPSGAYFGWKATAIGKN VNAKNFLEKRY E+ EL+DA+HTALLT+REGFEGEMT +NIE
Sbjct:   40 AKDGVVIATDKKLASSLVDIEQVNKVEAVTKSSGFVYSGVGPDYRVLVKKARKSSQAYYRTYREDQPVSQLVKQTAGVMQEYTQSGGVRPFGVSLLVAGMDSDGEPRLYQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYQEDVELEDAIHTALLTLREGFEGEMTSRNIE 210
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A7S1ZX62_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZX62_TRICV)

HSP 1 Score: 257 bits (657), Expect = 1.500e-84
Identity = 127/171 (74.27%), Postives = 147/171 (85.96%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDG-PQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            A +GVV+ T+KK  S L+DSD+V+K+  V    GFVYSG+GPDYRVL RK+RK AQ+Y+ +YRE QPV QLV+ TA VMQEYTQ GGVRPFGVSLLVAG D DG P+LYQVDPSGAYFGWKATAIGKN+VNAKNFLEKRY+++ EL+DAVHTALLT+REGFEGEMT KNIE
Sbjct:   40 ARDGVVVATDKKFQSDLVDSDDVTKVERVNDGCGFVYSGVGPDYRVLVRKARKSAQSYFRVYREPQPVSQLVKSTASVMQEYTQSGGVRPFGVSLLVAGVDGDGTPRLYQVDPSGAYFGWKATAIGKNYVNAKNFLEKRYTDDMELEDAVHTALLTLREGFEGEMTSKNIE 210
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A8J2SQ24_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ24_9STRA)

HSP 1 Score: 256 bits (654), Expect = 4.140e-84
Identity = 122/170 (71.76%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            A NGVV++T+KK+ + L+D  +V K+  V+PS GFVYSG+GPDYRVL +K+RKQAQAY+  YR ++PV  LV+DTA VMQEYTQ GGVRPFG+SLLVAGYDD+GPQL+QVDPSGAY+GWKA+AIGKNF NA++FLEKRY+++ ELDDA+HTALLTMREGFEGEMTE  IE
Sbjct:   41 AKNGVVLITDKKIQNKLVDVQQVKKLEKVSPSVGFVYSGVGPDYRVLVKKARKQAQAYFLQYRALKPVKALVQDTASVMQEYTQSGGVRPFGISLLVAGYDDEGPQLFQVDPSGAYYGWKASAIGKNFKNARSFLEKRYNDDVELDDAIHTALLTMREGFEGEMTEHTIE 210
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BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Match: A0A7S2BD82_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD82_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.150e-83
Identity = 122/170 (71.76%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:    1 ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARKSRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVHTALLTMREGFEGEMTEKNIE 510
            A+NGVV+ T+KKLPS L+D  +V K+  +TPS G VY+GLGPDYRVL + SRK AQ YY  Y E QP+  LV+DTA V QEYTQ GGVRPFGVSLLVAGYDDDGP L+QVDPSGAYFGWKATAIGKNF NA++FLE+R++EE EL+DA+H ALLTMREG+EGEM E NIE
Sbjct:   40 ASNGVVLCTDKKLPSTLVDEKQVQKLEEITPSCGMVYAGLGPDYRVLVKTSRKSAQKYYTTYHEQQPIPMLVKDTASVCQEYTQAGGVRPFGVSLLVAGYDDDGPHLFQVDPSGAYFGWKATAIGKNFKNARSFLERRFNEEMELEDAIHNALLTMREGYEGEMNENNIE 209
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15528.4113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZD1_ECTSI1.170e-11499.41PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A835Z0F7_9STRA6.010e-10085.2920S proteasome subunit alpha 2 n=1 Tax=Tribonema m... [more]
W7TKE3_9STRA3.250e-9583.53Proteasome subunit alpha type 2 n=3 Tax=Monodopsid... [more]
A0A7S1BSA3_9STRA4.040e-9176.47Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A6U1Q5Y5_9STRA1.610e-9079.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T7HTC8_9STRA1.040e-8574.29Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0C5Z3_9STRA1.890e-8575.44Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S1ZX62_TRICV1.500e-8474.27Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A8J2SQ24_9STRA4.140e-8471.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2BD82_9STRA1.150e-8371.76Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15528contigEcto-sp13_S_contig15528:253..3865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score335.1
Seed ortholog evalue1.9e-89
Seed eggNOG ortholog2880.D7FZD1
Preferred namePSMA2
Model size510
KEGG koko:K02726
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0000932,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005839,GO:0005840,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0035770,GO:0036211,GO:0036230,GO:0036464,GO:0042119,GO:0042175,GO:0042221,GO:0042742,GO:0042802,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051704,GO:0051707,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0097708,GO:0098542,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
Exons4
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsKOG0181@1,KOG0181@2759
EC3.4.25.1
Cds size510
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462823.4626667-CDS-Ecto-sp13_S_contig15528:252..3491681462823.4626667-CDS-Ecto-sp13_S_contig15528:252..349Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15528 253..349 -
1681462823.4831123-CDS-Ecto-sp13_S_contig15528:1202..12881681462823.4831123-CDS-Ecto-sp13_S_contig15528:1202..1288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15528 1203..1288 -
1681462823.4951022-CDS-Ecto-sp13_S_contig15528:2210..23451681462823.4951022-CDS-Ecto-sp13_S_contig15528:2210..2345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15528 2211..2345 -
1681462823.5089226-CDS-Ecto-sp13_S_contig15528:3673..38651681462823.5089226-CDS-Ecto-sp13_S_contig15528:3673..3865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15528 3674..3865 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15528.4113.1prot_Ecto-sp13_S_contig15528.4113.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15528 253..3865 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15528.4113.1

>prot_Ecto-sp13_S_contig15528.4113.1 ID=prot_Ecto-sp13_S_contig15528.4113.1|Name=mRNA_Ecto-sp13_S_contig15528.4113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp
ATNGVVIVTEKKLPSVLIDSDEVSKISLVTPSTGFVYSGLGPDYRVLARK
SRKQAQAYYNIYREVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGY
DDDGPQLYQVDPSGAYFGWKATAIGKNFVNAKNFLEKRYSEEAELDDAVH
TALLTMREGFEGEMTEKNIE
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mRNA from alignment at Ecto-sp13_S_contig15528:253..3865-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15528.4113.1 ID=mRNA_Ecto-sp13_S_contig15528.4113.1|Name=mRNA_Ecto-sp13_S_contig15528.4113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3613bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15528:253..3865- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGACGAACGGCGTGGTGATCGTGACGGAAAAGAAGCTCCCGTCGGTCTT
GATCGACAGCGACGAGGTCTCTAAGATCTCCCTGGTGACCCCCTCCACGG
GTTTCGTCTACTCGGGCCTGGGGCCGGACTACCGGGTGCTCGCCCGAAAG
AGCCGTAAGCAGGCCCAGGCCTACTACAACATATACCGGGAGGTCAGTAG
TTTCCATGTGTATGTTTTTTGTTGTGGGGAACAACAAGCAGGTCCAGGCC
TACTGCATCTAACCGGGAGTTGTTTGTTGTGTACGTTTTGAGTGGTGGGG
AACAAGCAGGCCCAGGCCTACTACAACATTTACAGGGAGGTTAGTGTATT
TTGTATGTGTTATATATTTAGGTGTATTGAACAACAACGCCACAGTTTGA
TGCCCCACACGCGAACTTGTACGGGGAGGTTAGTCTGGTGCGGTGGGGGC
AACATCACATTTTGTGACGTCACGCACGTGAACGTTACTGTAGTAGTGCC
GGTCAAATTGTCTGCGGCGCTAAGTATTGATCCACACTGTATTCGAAATC
AGAAGCACAGACCGTTGCGTAAGATATCACACCCCCTGGACCGATTTTCA
AGGCTTGATTTCTCGGCATGGAAAGCAGTAAGGACGCCGGAAATGTGGAG
TTGGAACGGTCGCGTCGAGAGCTTTGCGAGCACCTACCGTTCGCCTTCGG
CATCCTCTTGGTCGTAGAGTAATGGAGCTGTGGAAGTCGCTCCAGGGGGT
TTTGATATCTTACGTCATGCGACCTACGGTAGCCCGCATACTAGATACCG
GGAGGCTCAGAAGGAGACGAAACTCGATTGACTATACAACAGATGTCAAA
TGCCGGAAGGTTAGTACCGTAAGGGCCGGAGAGATGGCACCCGCGTGTTA
CGCGTTTTTTTCGGCGTATTTCTTCACAACCAGGAGAGTGCAAACACCAA
CCGGTACCTCTCACGAAAGTCCTCCATGAGATATTTCCAAAACTACCGTG
CCCTTTCCGGCAGTGGTACAATGCCCCCCCTGGTTGTAGAGAAATACGAT
ATATAAATTGCGCGAACTCGGGGGTGCCATCTCTCCGACATTAACGGGCA
GTCGGCGACGCGAACATGCGTCGTCGTAGTGGTACAGTAGCAGCTACTTT
TCTCAGGGAGACATGACCGTGTTTGGGCGGTGGCTTGCAGGGTGGCGGTA
GTCGTGTGGCCTGCATGTCATTGAGACTGCTGCTATTGTTTGCTGATGTT
GATGGCAATGTGCGAAGCGAGAGAGATATATATAGAGAGAGGTACATGGA
GAGAGAGAGGGAGAGCGAGAAAGAGATAAAGAGAGAGTCCCTGCTCGTTG
TGGTGCACTTGGGTTGTTTGTTTTTTCTTCCCCATGCATTCTGACGCGCC
AAGTCTCAAAGCACATGCACGGTATTGTTCACTTGGCGATTAGAGCCGGG
ATAAGGTTTACCTCTGAAAATTCAACGTCGTTTTGCCCCGCACGGCTTTT
GACGTGGCACGACACGATAGGTTCAGCCGGTGGGGCAGCTGGTGCGGGAT
ACGGCAGGGGTGATGCAGGAGTACACGCAGAGGGGAGGAGTCCGGCCGTT
CGGGGTGTCGCTGCTGGTGGCGGGCTATGACGACGACGGACCGCAGCTCT
ACCAGGTACGGTTGTTGTTGTTTTTTGTGATGCTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTGGTGGTGGTGGTGGTGA
GTGGGGTGGTTGTTTGTAAATAACAAAATACGTACATCACAAACCACCAC
ACTGCGGTATTGAGACTACAACGCCGTTCGAGGCCAGGCATTGAAGGGTT
CTATGGAGTTTTTTCACAGTAGCGAGTGGCGAGACCGATAAGGGGCTGGT
TACTGGACTCACTTCGTTTTTATTCATTGATGGGTGTATGTATTTATTTA
CCCTTGTTGAGGAATTGGTCTGAGACCACGGAAAGAAGCCGTGCGCATCA
GTTGGACCACCATGGGTATTTGGAGGTGCTCAGCGGAGACCGGGACGTCT
CTTCTGCGAAGATGACAACAAGTACTTGATCGATTCGCATCATCATTCTC
TCGCCCTTGCAATAAATGACAGCAACAAGTACTTGATCGTTTCGCGTCAT
CATTTTCTCACCCTTACGATCGGGTTGAACAACCACGATAGCACCAATAA
TGTTTCAGCAGGTGGCACGATATAATGGCAGCAAATCCTCTCCGTCACAA
CCTCAAAGTGTACATAAACCCAATACATCGAATGGTGGCACTGCCCTGAG
TAGTGCCATAGTCTGCTCTTGCTCCTCACATGCCACTGTATCGGGCCGCC
TTCTGCACTGGACTTGTAACGACACTGGACTGCCTGTAGTTTATTCTGTA
GGATGGCCAATCAGGTAGATCCCTCCCCTTTTTTTTCGGAGACAACGACA
TATGCTTGATCGTTTTGCGGCTTCATCCTCTCACCCTACGATTGGGTTGA
ACAACAACAGCAGCACCAATCAATGTCACTGGACTATCACAGGACTGTTA
CTTGTTATTTTGCCATTGACCAATCAGGTGGACCCCTCCGGAGCTTACTT
CGGGTGGAAGGCGACGGCCATCGGCAAGAACTTCGTCAACGCAAAAAACT
TCTTGGAGAAGCGGTGGGTTCACATGCTTGTGCTTTGTTTATTGGCCGCG
AAAGCGCGCGTTCAGGCCCTCTTTTATCGTTTGGCTTTTTGTCATTTCCA
ATTTTTGAATTTCCACAACTGTGGAAGCCATCCCAAACTTAAAAAAAGCT
TTCGAAGTGTTTTCGAAAAATTGTACGCGGGTCCAAAATCTTTGGAACGC
TGAATTTGGAAGCACTCATAAAACTGAAAAACATTCAAAAATAGCGCTCT
GTTAACAATGGCCCTTAGTATTCGATCTCGTAGGAGCCCTGAAGGACCCT
ATTTATCCGGTGCGCGTGTTGCGAACCCCGGCAACCGCGTGAAAAACTGC
CGAGCCCTCGACGGGTAACAGGTACTGTCGAGACCGTGGGTGAACGATTG
TCAACGACGGACGGGCCTGGGAAAAAGTGCCGCAACGGTTTCGATATTTC
TTTCGACGTCGTGCAGATGATTGCTGATATCCTGCGTCCCCATCTGAAAC
ATATTGAATGCCTCAAAACGAAAACAGAACACACATCGAACACACATGGA
TATGTGGAGACCTTGCTGTAGTGGATATTGACACCTGAAAAAATGATTAA
TAAAATAAAATAGAGTTTGTTTGCCGCTACCCACTGGCGTCTTCTTCTCA
TTGATCAGCGGGCGTATTCTGTACGGTCGATCCTGTTAACAATGACACGC
ACATCACACACGGCATCTGTCGTTAATCCGGAGAGAAGTATTTTGTGCTT
TCAAAGCGCACTGACACTGACGTATTTTCATTGGTCAGCCGGTTGGCAGC
GCGGTCGGCGCTGATAATTAAAACAAGTACATACGCACATCTGTACCTTT
TCTTTGTTTATTTCAGGTACTCCGAGGAAGCCGAGCTTGATGATGCGGTA
CACACGGCGCTGCTGACGATGCGGGAGGGTTTTGAGGGGGAGATGACGGA
AAAGAACATCGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15528:253..3865-

>mRNA_Ecto-sp13_S_contig15528.4113.1 ID=mRNA_Ecto-sp13_S_contig15528.4113.1|Name=mRNA_Ecto-sp13_S_contig15528.4113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=510bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15528:253..3865- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGACGAACGGCGTGGTGATCGTGACGGAAAAGAAGCTCCCGTCGGTCTT
GATCGACAGCGACGAGGTCTCTAAGATCTCCCTGGTGACCCCCTCCACGG
GTTTCGTCTACTCGGGCCTGGGGCCGGACTACCGGGTGCTCGCCCGAAAG
AGCCGTAAGCAGGCCCAGGCCTACTACAACATATACCGGGAGGTTCAGCC
GGTGGGGCAGCTGGTGCGGGATACGGCAGGGGTGATGCAGGAGTACACGC
AGAGGGGAGGAGTCCGGCCGTTCGGGGTGTCGCTGCTGGTGGCGGGCTAT
GACGACGACGGACCGCAGCTCTACCAGGTGGACCCCTCCGGAGCTTACTT
CGGGTGGAAGGCGACGGCCATCGGCAAGAACTTCGTCAACGCAAAAAACT
TCTTGGAGAAGCGGTACTCCGAGGAAGCCGAGCTTGATGATGCGGTACAC
ACGGCGCTGCTGACGATGCGGGAGGGTTTTGAGGGGGAGATGACGGAAAA
GAACATCGAG
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