mRNA_Ecto-sp13_S_contig15527.4112.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15527.4112.1
Unique NamemRNA_Ecto-sp13_S_contig15527.4112.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A6H5JHA5_9PHAE (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA5_9PHAE)

HSP 1 Score: 612 bits (1578), Expect = 2.120e-212
Identity = 364/407 (89.43%), Postives = 371/407 (91.15%), Query Frame = 1
Query:    1 LAPAVAPRAGTSALFVTSSVDPAVSLPTTPEATPAGSVAAGAGGSVFAAERSRCRPLVRTAPLRFNVAKPSRTELFLAPSANIRAPGPSSSAADTGSADTTEMRCGGSXXXXXXXMISRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------PRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL 1191
            LAPAVAPRAGTSALFV SSVDPAVSL TTPEAT AGS AAGA GSV AAER+RCRPLVRT PLRFNVAKPSRTE+FLAPSANIR PGPSSS+ADTGSADTTEMRCGG   XXXX MISRFTWLESVNSTMDEVKTLI+NQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRH             XXXXXXXXXXXXXXXXXXXXXXXXXX          PRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKP+VPQNGPDRGRPA CLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRV+DPATG+EELLATEYLL
Sbjct:  157 LAPAVAPRAGTSALFVVSSVDPAVSLATTPEATLAGSAAAGAEGSVVAAERARCRPLVRTTPLRFNVAKPSRTEIFLAPSANIRTPGPSSSSADTGSADTTEMRCGG---XXXXGMISRFTWLESVNSTMDEVKTLIINQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHRQEERPPLYPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPEVPQNGPDRGRPATCLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVMDPATGEEELLATEYLL 560          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: D7FRR2_ECTSI (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR2_ECTSI)

HSP 1 Score: 463 bits (1191), Expect = 8.730e-158
Identity = 268/301 (89.04%), Postives = 272/301 (90.37%), Query Frame = 1
Query:  307 MRCGGSXXXXXXXMISRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------PRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL 1191
            MRCGG XXXXXXXM+SRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRH           XXXXXXX          XXXXXXXXXXX      PRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKP+VPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRP+GVAPDGRLRVVDPATG+EELL TEYLL
Sbjct:    1 MRCGGXXXXXXXXMVSRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHRQEERPPLSPPXXXXXXXREARTAEAAEXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPEVPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPIGVAPDGRLRVVDPATGEEELLTTEYLL 301          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: F0Y9I2_AURAN (Uncharacterized protein BPL2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I2_AURAN)

HSP 1 Score: 189 bits (481), Expect = 3.740e-52
Identity = 124/283 (43.82%), Postives = 145/283 (51.24%), Query Frame = 1
Query:  364 WLESVNSTMDEVKTLIV-----NQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLP-GNVFLTVAIPLDRVPV-PLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL 1191
            WL    ST D  K ++      N  G D K V AVA   Q  GRGT+GR W     GNV LTVA+ +  +P+ P++L+PLRVG     E+ R L  H                                         VSLKWPNDVLL G KV GVLIEA+   LLVG+G+NV   PDVPQ GP+RGR A  LA  GA S D     ++  L   L +WA G D A T VA WS +VDWSLPL +RD    V PV + PDGRLRV   A G E  L  EYLL
Sbjct:   33 WLRETKSTQDAAKQILKQRVVGNSNGHDGKHV-AVATAHQTAGRGTRGRTWNDDGRGNVALTVALDMRHLPLKPVTLVPLRVGV----EVARVLADHLEDAPGCA---------------------------------VSLKWPNDVLLNGKKVCGVLIEADGDALLVGVGINVATHPDVPQAGPERGREATSLAACGATSAD--AEAIAKDLAAHLSTWADGVDDAPTLVAHWSHFVDWSLPLTLRDTSEVVSPVRLLPDGRLRVRPAAGGPERDLVAEYLL 275          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: W7TWD4_9STRA (Biotin lipoate protein ligase-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWD4_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.510e-48
Identity = 117/292 (40.07%), Postives = 157/292 (53.77%), Query Frame = 1
Query:  358 FTWLESVNSTMDEVKTLI-------VNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIP---LDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAE--LPFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGADSTD-EAVRELSAALTEKLCSWASGT--DSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYL 1188
            F W+  V ST D ++TL+       ++Q+G DA    A++A  Q++GRGT GRAW+G  GN+FLTVA+P   L  +  P++L+PLR+GTLIA EI R LP                                          RV LKWPNDVLL   KV+G+LIE +    + LVGIGVNV   P VP  G DRGR AACLA  G +    +  R+LS A+   + +W  G+  D+A + +A+W +   W    ++RD G AV P+ +  DGRLRV D  +G   LL  EYL
Sbjct:  103 FVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDA---LALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPH------------------------------------PEAQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGG-AVVPLALETDGRLRVRDLTSGATRLLTAEYL 354          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A7S1ZSF1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZSF1_TRICV)

HSP 1 Score: 174 bits (441), Expect = 1.790e-46
Identity = 112/292 (38.36%), Postives = 157/292 (53.77%), Query Frame = 1
Query:  364 WLESVNSTMDEVKTLIVN--QEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRV-PVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAEL------PFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGA----DSTDEAVRELSAALTEKLCSWASGTD-SASTAVAEWSRWVDWSLPLEIRD--EGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL 1191
            +L +V ST DE K ++     +G D+   FAV+A EQ  GRGTKGR WIG PGN F+T+ +P D + P+P++L+PL++GT++A  I R                                             RV +KWPNDVL+   KVAG LIE+         + L+GIGVNV + P + Q GP RGR A CL++ G+    D T+++ R L+A L E++ +WA+  D +A   V EW  W D+     +RD  E   V P+ + PDGRL+V   A GK +LL T+YLL
Sbjct:   15 YLGTVGSTQDEAKRILQEYANKGDDSPDCFAVSANEQNHGRGTKGRDWIGRPGNCFVTICLPCDLITPLPVTLLPLKIGTIVATHIDRAF-----------------------------------RSVGVHGARVRVKWPNDVLINDGKVAGALIESHCNPETLRSWYLIGIGVNVAHAPTIYQFGPQRGRQATCLSEHGSFVKGDGTNDS-RTLAADLAEEVHAWATEGDMTAEGVVREWEAWADFGREQVLRDKPENEVVVPLAIEPDGRLKVRG-ADGKIQLLCTDYLL 269          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A4D9DDQ4_9STRA (BPL/LPL catalytic domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDQ4_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.100e-44
Identity = 107/268 (39.93%), Postives = 146/268 (54.48%), Query Frame = 1
Query:  409 IVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIP---LDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAE--LPFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFG-ADSTDEAVRELSAALTEKLCSWASGT--DSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYL 1188
            +++Q+G DA    A++A  Q++GRGT GRAW+G  GN+FLT+A+P   L  +  P++L+PLR+GTLIA EI R LP                                          +V LKWPNDVLL   KV+G+LIE +    + LVGIGVNV   P VP  G DRGR AACLA  G A    +  ++LS A+   + +W  G+  D+A + +A+W +   W    ++RD G AV P+ +  DGRLRV D  +G   LL  EYL
Sbjct:   12 LLSQKGVDA---LALSAGSQIQGRGTSGRAWMGGAGNMFLTLALPARTLSALTYPITLLPLRMGTLIAREIVRFLPN------------------------------------PEAQAKVQLKWPNDVLLDDGKVSGLLIEMDGTCSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLAGRGGDTAKDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGG-AVVPLALETDGRLRVRDLTSGATRLLTAEYL 239          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A7S1GL90_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL90_CYCTE)

HSP 1 Score: 169 bits (429), Expect = 2.760e-44
Identity = 103/285 (36.14%), Postives = 148/285 (51.93%), Query Frame = 1
Query:  358 FTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAEL----PFLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGADST--DEAVREL-SAALTEKLCSWASGTD-SASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYL 1188
            F  ++   ST D  KTLI  + G++   ++ V    Q  GRGT GR WI   GNVFLT+A+P+  +PVP++L+PL++G L+A  + +                                             + ++KWPNDVL    K+AG+LIE+ +     +LLVGIGVN+   P VP  GPD+GRPA CL  + +      E++ E+ S  L      W   +D SA    +EW RW +W+ PL+IR+ G AV P+ +  DGRLRV +  +GKE LL  +YL
Sbjct:   54 FYHVQEAESTQDLAKTLI-ERGGAEDDHLWVVTTDNQTHGRGTTGRTWISRKGNVFLTIAVPMTSIPVPITLLPLQMGVLVAERLDK----------------------------IYHQLKPDDEEDGSERLQPTVKWPNDVLFNDEKIAGILIESHVVENVTWLLVGIGVNLLQTPQVPTEGPDKGRPATCLQHYVSHDVLLPESLAEVFSHDLAVAFEQWLDDSDVSAEQVRSEWKRWANWAKPLQIRETGEAVFPMDIEADGRLRVKE-MSGKERLLVADYL 308          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A8J2WZ73_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ73_9STRA)

HSP 1 Score: 162 bits (410), Expect = 3.360e-42
Identity = 104/278 (37.41%), Postives = 145/278 (52.16%), Query Frame = 1
Query:  364 WLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLP-GNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPDVPQNGPDRGRPAACL-ADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL 1191
            WLE+  STMD  K L+  +  +DA R  AVA   Q +GRGT+GR+W     GNV LTVA P +    P++L+PLRVGT++   +                                               R+SLKWPNDVLL G KVAG+L+E++   + VG+GVNV + P VP  GPDRGR AA +  D  A         ++ ++ + L +W+   D A++ + +WS  VDW+  LE+R+ G  V+PV + PDGRL+V     G E  L  +YLL
Sbjct:   36 WLETTPSTMDAAKDLLKERGDTDA-RPLAVATAHQTKGRGTRGRSWTDDGRGNVALTVAFPSEIPLAPITLLPLRVGTVVIDALN--------------------------------------------DSRLSLKWPNDVLLEGGKVAGILVESDGNAIYVGVGVNVASAPAVPSAGPDRGRRAAKIPGDAFA---------IAQSIADGLGAWSQDRDDATSVITDWSARVDWAADLELRETGELVKPVRLLPDGRLKV--RGAGGERALVADYLL 257          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A7S2U6B7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6B7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.220e-40
Identity = 106/284 (37.32%), Postives = 148/284 (52.11%), Query Frame = 1
Query:  382 STMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPV-PLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELP----FLLVGIGVNVRNKPDVPQNGPDRGRPAACLADF-GADSTDEAVRELSAALTE---KLCSWASGT----DSASTAVAEWSRWVDWSLPLEIRDEG--RAVRPVGVAPDGRLRVVDPATGKEELLATEYL 1188
            ST DE + LI++ E S A   FAV A EQ RGRGT GR+WIG  GNVFLTV I  + VP+ P++L+PL++G L+A  I  R+                                            V++KWPNDVL+ G KVAG+LIE  +     + LVGIG+NV   P +   GP+ GRP+AC+ D+ G+ +T  A  E +A  T+    + +W   +    +++   V EW  W +    L +RD+     V P+G+ PDGRLRV D   G+E  L  +YL
Sbjct:  105 STQDEARRLIMD-ELSSAHDNFAVLATEQTRGRGTCGRSWIGRKGNVFLTVGIKSEEVPIHPITLVPLKMGVLVARAIHDRIQNSGNSSSGKGTCA------------------------------VTVKWPNDVLVDGKKVAGILIENFIHDNQVWFLVGIGINVAEAPAIDSQGPEGGRPSACILDYCGSSATINATEECNALATQIANSVHTWVQNSTGQYETSRDVVKEWEEWAELGKELFLRDDASREPVIPLGIEPDGRLRVRD-RNGRERFLVADYL 356          
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Match: A0A7S1BNJ6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNJ6_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.140e-39
Identity = 105/287 (36.59%), Postives = 144/287 (50.17%), Query Frame = 1
Query:  373 SVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELP------FLLVGIGVNVRNKPDVPQNGPDRGRPAACLADFGADSTDE-AVRELSAALTEKLCSWASGTDSASTA-----VAEWSRWVDWSLPLEIRD--EGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL 1191
            +V+ST DE + L V     DA    AV A  Q  GRGT GR WIG  GN+FLTVA+P++ VPV  +L+PL+VG ++A  ++R L                                           +V+LKWPNDVL+   K+AGVLIE E        + L+GIGVNV + P++P  G +RGRPA CL D      DE ++     ++   + +W   T     A     + EW  + ++  PL+IRD      V P+ +  DGRLRV+    GKE LLA +YLL
Sbjct:  108 AVDSTQDECRAL-VRSRAPDAVGAVAVTATRQTGGRGTNGRKWIGRSGNLFLTVAVPINAVPVTPTLLPLKVGVIVASNVRRVL----------------------------------LESSLNERSKVTLKWPNDVLIDDKKIAGVLIENEYQKNYNDGWFLIGIGVNVASAPEIPNVGEERGRPATCLGDHMEGGLDEGSLLRFGESIAGDISTWIFKTVDEKEAESAKILEEWRGFANFGKPLKIRDGPSNEMVIPLDIESDGRLRVLGD-NGKERLLAADYLL 358          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15527.4112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHA5_9PHAE2.120e-21289.43BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
D7FRR2_ECTSI8.730e-15889.04BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
F0Y9I2_AURAN3.740e-5243.82Uncharacterized protein BPL2 n=1 Tax=Aureococcus a... [more]
W7TWD4_9STRA2.510e-4840.07Biotin lipoate protein ligase-like protein n=1 Tax... [more]
A0A7S1ZSF1_TRICV1.790e-4638.36Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A4D9DDQ4_9STRA2.100e-4439.93BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
A0A7S1GL90_CYCTE2.760e-4436.14Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J2WZ73_9STRA3.360e-4237.41Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2U6B7_9STRA2.220e-4037.32Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1BNJ6_9STRA1.140e-3936.59Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15527contigEcto-sp13_S_contig15527:3..3744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score466.1
Seed ortholog evalue1.2e-128
Seed eggNOG ortholog2880.D7FRR2
Model size1818
KEGG rclassRC00043,RC00070,RC00096,RC02896
KEGG koko:K03524
KEGG ReactionR01074,R05145
KEGG Pathwayko00780,ko01100,map00780,map01100
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Biotin/lipoate A/B protein ligase family
EggNOG OGs2SA0E@2759,COG0340@1
Ec32 ortholog descriptionBiotin/lipoate A/B protein ligase
Ec32 orthologEc-00_003530.1
EC6.3.4.15
Cds size888
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15527.4112.1prot_Ecto-sp13_S_contig15527.4112.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15527 1271..3120 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462823.370925-UTR-Ecto-sp13_S_contig15527:2..1661681462823.370925-UTR-Ecto-sp13_S_contig15527:2..166Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15527 3..166 +
1681462823.3826811-UTR-Ecto-sp13_S_contig15527:763..8581681462823.3826811-UTR-Ecto-sp13_S_contig15527:763..858Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15527 764..858 +
1681462823.3960924-UTR-Ecto-sp13_S_contig15527:1223..12701681462823.3960924-UTR-Ecto-sp13_S_contig15527:1223..1270Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15527 1224..1270 +
1681462823.4379306-UTR-Ecto-sp13_S_contig15527:3120..37441681462823.4379306-UTR-Ecto-sp13_S_contig15527:3120..3744Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15527 3121..3744 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462823.4044206-CDS-Ecto-sp13_S_contig15527:1270..13871681462823.4044206-CDS-Ecto-sp13_S_contig15527:1270..1387Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15527 1271..1387 +
1681462823.4125333-CDS-Ecto-sp13_S_contig15527:1776..19601681462823.4125333-CDS-Ecto-sp13_S_contig15527:1776..1960Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15527 1777..1960 +
1681462823.4205546-CDS-Ecto-sp13_S_contig15527:2185..25321681462823.4205546-CDS-Ecto-sp13_S_contig15527:2185..2532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15527 2186..2532 +
1681462823.430346-CDS-Ecto-sp13_S_contig15527:2880..31201681462823.430346-CDS-Ecto-sp13_S_contig15527:2880..3120Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15527 2881..3120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15527.4112.1

>prot_Ecto-sp13_S_contig15527.4112.1 ID=prot_Ecto-sp13_S_contig15527.4112.1|Name=mRNA_Ecto-sp13_S_contig15527.4112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
MRCGGSGGGGGGGMISRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVA
AREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAP
EIQRRLPRHSPEERPQLSPPPSPSASPQEARTAEAAEPQPEPQPEPKPPR
VSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPDVPQNGPDRG
RPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWV
DWSLPLEIRDEGRAVRPVGVAPDGRLRVVDPATGKEELLATEYLL*
back to top

mRNA from alignment at Ecto-sp13_S_contig15527:3..3744+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15527.4112.1 ID=mRNA_Ecto-sp13_S_contig15527.4112.1|Name=mRNA_Ecto-sp13_S_contig15527.4112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3742bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15527:3..3744+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTTGCCCCTGCGGTCGCTCCGCGTGCCGGCACAAGTGCCCTGTTCGTTAC TTCTTCCGTCGACCCCGCTGTTTCTCTCCCCACCACACCCGAGGCAACAC CGGCAGGGAGTGTTGCTGCAGGCGCGGGAGGATCTGTCTTTGCGGCTGAA CGCTCTCGTTGCAGGTGTGCTGGGAGGGGGAAGGGCGGAGTACCTTGATT GTGATTGAGACTGTGGATGAGGGCTGACTTTGTGCCACTTGATGGGCGTG CGTGTTGCGAAGGTCAATGTCAGTCGATTGATTCATGAAAAAGAGTCGGC ACTCAGTAGATGCAATCGTCGTCCACAAGCAGTTTCGAATCAGCCTGCTG AGTATCGGTACTTGAGGTTATCATTTTGTTTCTGGTGGCCAGATCAACCA CAATTCCAAGCCACCCTCTCTCTTATCTAATCAAGTAACGGCAGCTGCAT TGTAGTCGCTTTGCTCTTCTTCATCGTCGACAGACGGTTGCCATGCTCTA CATACGGGGAGCACACACTTGGAGATTTCCTAGTCTCGACGAAGATCACC AAACTCGCCCAAGCTCTCTTCGCGACAAAGAGTATCCACGGCAACGCGAA ATGAAAATAGACGCGTGTTGTACTTCGTTCTAGGCACAAGCAGCGAAATG ACTGATAGACTTGTGTTGTACCGGATCAGTAACACCTGCCAGAACGGTTC AAATTTTTTGCCCACCAAGCGCCCTGTTCATAGTCACGCCTTTTCGCCCA ACCGTTGCCAGGCCGTTGGTGCGAACAGCTCCCCTTCGGTTCAACGTTGC CAAGCCCAGCCGGACCGAGCTCTTTCTCGCACCAAGCGCAAATATCCGGG CTCCAGGTAAGCGCTTGCGCTCTGGCCCCGCACAAATGTCCTCACCGTAC AGCCCTGCCTACAGAAACGCATCACACAGCACCGCGTACCCAAGGCGTTG CTTGTGACCCAACAGTGTGTGGGCGTGTGTGTTTTCTGCATGCATCACGT TCGGGCTCACAGCTGTCTGGTCAACTTGTCTCTCCTCGCCCAACAAGCAA ATTAAAGCGTTTCTGCCATTGCAAGCGACCGACCTCGGAGCAATTTATGC CGTGGTCGGTCTCGACACGGTCGTAGGGTACTTGTTTGAACGTGCAAGGG AGCAAAGACTTCTTGATATCCCCTCCTTGATAATTTGTTGGAATTCCCAC GTACCGGTGGTTGAGGTGTAGGCCCATCATCTTCGGCTGCTGACACGGGG TCAGCAGATACGACTGAAATGAGGTGCGGGGGCAGCGGGGGCGGCGGAGG CGGGGGCATGATATCGAGGTTCACATGGCTGGAGTCCGTCAACTCCACCA TGGACGAGGTCAAAACCCTCATCGTCAACCAAGAGGTATTTCCGGGGAAA GGGCGCATGTAGAGACTTAGAGCACGGCTCGCACGAGTCAAGATTACCGC TTTCAAATTTTGTGCCTGACCGTGTCTGTTATTTTTTTGGGGGTGTGATG CTTGGTCGATGAACAAACGGTTGTGTGAAACACGCCGCGTGTCGCGCATA CGTACATCCGTTCCCAGCACGTGTCCCACCGTTCGGGATGTTCACCCAAG TGAGACATCAGGCTCTATTTAATATTGTAACAAGACATGACGCTCAATTT AACATTGTAACGAGACATCACGCTCTGTTTAGTATCGTAGTCGCCGCGGA AAACCGGCAGTCATGGGCTTGATGATTTTTTTTCACACGTCGCAACCCCG CCCACCGTGCCGTGTGGCTGTTAGGGAAGCGACGCGAAACGCGTGTTTGC TGTGGCAGCGAGAGAACAGCTTCGCGGGAGAGGGACGAAGGGTCGGGCTT GGATAGGCCTCCCTGGGAACGTGTTCCTCACTGTGGCCATTCCGCTAGAC AGGGTCCCCGTACCGCTGAGCCTCATTCCTCTAAGGGTCGGCACACTAAT AGCGCCAGGTGAGCATGGAAGATACTTCGATCGAGAGACGGAAAGAGAAC GCGAGGTGCTTTGCTGAAAAACCAACCGCACCGGATCTCGAGAGAAGAAT ATCATTTCGAATAACGTCGTCCCGTCTCTAACTCCTAGCGTGCTTTCGTG ACGACTCCCTCCCAGCTCTACCCTTCCTCGCCCTTGTTTGAGTTCGATCC TCCCCGATGCTGCCCCCCTTCGTCCTGGCGCAGAGATACAACGGCGACTT CCAAGGCATAGTCCAGAAGAGCGGCCCCAGCTTTCTCCGCCTCCATCTCC GTCCGCGTCTCCCCAAGAAGCGAGGACGGCGGAGGCGGCAGAACCGCAAC CGGAACCCCAACCGGAACCGAAACCGCCTCGGGTGTCGCTCAAGTGGCCG AACGACGTCCTCCTCGGCGGCTCCAAGGTCGCCGGAGTGCTGATCGAGGC GGAGCTACCCTTTCTACTCGTCGGAATCGGCGTCAACGTCAGAAACAAGC CGGACGTGCCCCAGAATGGTCCCGACCGTGGCAGGCCCGCTGCTTGCCTT GCCGACTTTGGGGCGGACAGCACCGATGAGGTGGGGGCCGTTTGGGACGA GGATTGATGAACGGATCGATGTTTTGTGTAGTTGGTTTTTCTTGCAGCCC TACATGCAGCGAACGAGACAAGCAAGTCGTTTTCGCCAAGTCAGATTTCG CGTTTAGCAGCTGACCTCCCTCCCAATGCTTAACGAAGCGTCCCTCGACT TCGTTCTTGTCATGACTTCAACCGTGACTCTCCCTCAAAAGCGGGTGCTC TCGTGCTTTCCGTTCAACAGCTGCTCGGTTCCGACTCTGTGCTCTGTTCG CCAACATGCCATTCCTTTGCGCAAGAGACAACGACATCCTCCCTCTCCCC ATCCACACTCACCCATCCCAACACAAAGGCGGTGAGAGAGCTGTCCGCGG CGCTGACCGAAAAACTATGCTCCTGGGCCTCCGGGACGGATTCGGCGTCC ACCGCCGTGGCCGAGTGGTCACGGTGGGTGGACTGGTCCCTGCCGCTGGA GATCAGGGACGAGGGGCGGGCAGTGAGGCCGGTCGGAGTCGCGCCGGACG GGCGGCTGCGGGTGGTTGACCCGGCAACGGGCAAGGAGGAACTGCTCGCC ACGGAATACCTCCTTTAAACCGCGAGGGCATTCGCTGGTTTACCTTCTTT TTGACCGCGCGCAGCCTTTTTTCGTCTCGTTGAGAAACTCTCACAACGGC GATTGTATGCACGCTACCGGCGCCTAAATCTGTTTTTTTTATTCTTCAAC AGAGGAGGAGGGGGCGAGTACAAAAAGCTGTTGGCCTAGTCTCCGCCGAG ATTCTCCCCTTACTACGATAACGGGGCATCCAATTTGAGTTGCATTCACA CGGCTTTGCTTTGTAGTGTGGATTTCTTGTCTCCGTGCTCTATCAACTCT GTCCAGAGACCTTTGGGCAACGCCGCTTGGTAGAGGTATGACATTTTTTG GGGTGTTCCATGGAGCACGAAAAACACTTTCCGGCAAGGCCACAGGCAAC AGACGCTGGTGTCGTGACGATCGCTCTAGCACGATCCAAGTGAGAACTAT TAGTCCACTTCTTGACGTGTTAGTGTTGGTGGCGTCACAATTCTTGCCTT GTTCCTTCGAAGCGACGGTACGACTCGCTCCTGAGAACGTTGCGTGTATC GATAGCAGTTGGGGTTGCTAGTGGCCCAACAAGAGTACAGGATTTTTTTT CAAAACGTGTCCCGGATCTTCCAGATGGAAAAATGATCGAGC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15527:3..3744+

>mRNA_Ecto-sp13_S_contig15527.4112.1 ID=mRNA_Ecto-sp13_S_contig15527.4112.1|Name=mRNA_Ecto-sp13_S_contig15527.4112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15527:3..3744+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGTGCGGGGGCAGCGGGGGCGGCGGAGGCGGGGGCATGATATCGAG
GTTCACATGGCTGGAGTCCGTCAACTCCACCATGGACGAGGTCAAAACCC
TCATCGTCAACCAAGAGGGAAGCGACGCGAAACGCGTGTTTGCTGTGGCA
GCGAGAGAACAGCTTCGCGGGAGAGGGACGAAGGGTCGGGCTTGGATAGG
CCTCCCTGGGAACGTGTTCCTCACTGTGGCCATTCCGCTAGACAGGGTCC
CCGTACCGCTGAGCCTCATTCCTCTAAGGGTCGGCACACTAATAGCGCCA
GAGATACAACGGCGACTTCCAAGGCATAGTCCAGAAGAGCGGCCCCAGCT
TTCTCCGCCTCCATCTCCGTCCGCGTCTCCCCAAGAAGCGAGGACGGCGG
AGGCGGCAGAACCGCAACCGGAACCCCAACCGGAACCGAAACCGCCTCGG
GTGTCGCTCAAGTGGCCGAACGACGTCCTCCTCGGCGGCTCCAAGGTCGC
CGGAGTGCTGATCGAGGCGGAGCTACCCTTTCTACTCGTCGGAATCGGCG
TCAACGTCAGAAACAAGCCGGACGTGCCCCAGAATGGTCCCGACCGTGGC
AGGCCCGCTGCTTGCCTTGCCGACTTTGGGGCGGACAGCACCGATGAGGC
GGTGAGAGAGCTGTCCGCGGCGCTGACCGAAAAACTATGCTCCTGGGCCT
CCGGGACGGATTCGGCGTCCACCGCCGTGGCCGAGTGGTCACGGTGGGTG
GACTGGTCCCTGCCGCTGGAGATCAGGGACGAGGGGCGGGCAGTGAGGCC
GGTCGGAGTCGCGCCGGACGGGCGGCTGCGGGTGGTTGACCCGGCAACGG
GCAAGGAGGAACTGCTCGCCACGGAATACCTCCTTTAA
back to top