prot_Ecto-sp13_S_contig15522.4111.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15522.4111.1
Unique Nameprot_Ecto-sp13_S_contig15522.4111.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length170
Homology
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: A0A6U1NL74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NL74_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.620e-77
Identity = 119/155 (76.77%), Postives = 133/155 (85.81%), Query Frame = 0
Query:   13 DTNAPKAWEERGLKRAELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            D+N     + R  KR  LFEKGQS+RIW+ELYKVLDCSDVVIQVLDARNVPGTRC  +E HLKKNA+HKH +FV+NK DLVP+WV + WV+ LS T PTLAFHASITNSFGKGA+INLLRQFAKLH DKK ISVGV+GYPNVGKSS+INTLKKKK
Sbjct:   35 DSNLQVEEDFREEKRHSLFEKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCQRIEAHLKKNAAHKHFLFVLNKCDLVPSWVVRGWVRELSKTTPTLAFHASITNSFGKGAVINLLRQFAKLHQDKKNISVGVIGYPNVGKSSLINTLKKKK 189          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: W7U800_9STRA (Nucleolar GTP-binding protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U800_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.090e-76
Identity = 117/142 (82.39%), Postives = 131/142 (92.25%), Query Frame = 0
Query:   26 KRAELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            +R +LF+KGQSRRIW ELYKV+DCSDVVIQVLDARN+PGTRC HLERHLKKNASHKHLI ++NK DLVP WV ++WV+LLS  +PTLAFHASITN+FGKG+LINLLRQ+AKLH DKKQISVGVVGYPNVGKSSIINTLK KK
Sbjct:  212 RRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCAHLERHLKKNASHKHLILIVNKCDLVPAWVVRRWVRLLSQHYPTLAFHASITNAFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKK 353          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: D8LTC1_ECTSI (Nucleolar GTP-binding protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTC1_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.600e-76
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
Query:   45 KVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            +VLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK
Sbjct:  166 EVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 288          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: A0A8K1C6Q5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6Q5_PYTOL)

HSP 1 Score: 244 bits (622), Expect = 1.090e-75
Identity = 114/139 (82.01%), Postives = 127/139 (91.37%), Query Frame = 0
Query:   29 ELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            ++F KGQSRRIW ELYKVLDCSDVVIQVLDARNVPGTRC H+E H++KNA+HKHLIFVINK DLVP WVTKKWV+ LS T PTLAFHAS+ N+FGKGALINLLRQFAKLH DKKQISVG++GYPNVGKSS+IN L+KKK
Sbjct:  199 DVFSKGQSRRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVENHIRKNAAHKHLIFVINKCDLVPNWVTKKWVQKLSETTPTLAFHASLNNAFGKGALINLLRQFAKLHQDKKQISVGLIGYPNVGKSSVINALRKKK 337          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: K3WX25_GLOUD (Nucleolar GTP-binding protein 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX25_GLOUD)

HSP 1 Score: 242 bits (618), Expect = 4.970e-75
Identity = 113/139 (81.29%), Postives = 127/139 (91.37%), Query Frame = 0
Query:   29 ELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            ++F KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTRC H+E+H+KKNA+HKHLIFVINK DLVP WVTKKWV+ LS T PTLAFHAS+ N FGKGALINLLRQFAKLH DKKQISVG++GYPNVGKSS+IN L+KK+
Sbjct:  196 DVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIKKNAAHKHLIFVINKCDLVPNWVTKKWVQKLSETTPTLAFHASMNNPFGKGALINLLRQFAKLHQDKKQISVGLIGYPNVGKSSVINALRKKR 334          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: D0NUW0_PHYIT (Nucleolar GTP-binding protein 2 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NUW0_PHYIT)

HSP 1 Score: 241 bits (614), Expect = 5.020e-75
Identity = 112/139 (80.58%), Postives = 127/139 (91.37%), Query Frame = 0
Query:   29 ELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            ++F KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTRC H+E+H++KNASHKHLIFVINK DLVP WVTK+WV+ LS   PTLAFHAS+TN FGKGALINLLRQFAKLH +KKQISVG++GYPNVGKSS+IN L+KKK
Sbjct:  196 DVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNASHKHLIFVINKCDLVPNWVTKRWVQKLSEATPTLAFHASMTNPFGKGALINLLRQFAKLHQEKKQISVGLIGYPNVGKSSVINALRKKK 334          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: M4BSB5_HYAAE (Nucleolar GTP-binding protein 2 n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BSB5_HYAAE)

HSP 1 Score: 241 bits (615), Expect = 1.100e-74
Identity = 112/139 (80.58%), Postives = 128/139 (92.09%), Query Frame = 0
Query:   29 ELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            ++F KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTRC H+E+H++KNASHKHLIFVINK DLVP WVTK+WV+ LS T PTLAFHAS++N FGKGALINLLRQFAKLH +KKQISVG++GYPNVGKSS+IN L+KKK
Sbjct:  196 DVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNASHKHLIFVINKCDLVPNWVTKRWVQKLSETTPTLAFHASMSNPFGKGALINLLRQFAKLHQEKKQISVGLIGYPNVGKSSVINALRKKK 334          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: A0A5D6XVC1_9STRA (Nucleolar GTP-binding protein 2 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVC1_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.570e-74
Identity = 112/139 (80.58%), Postives = 127/139 (91.37%), Query Frame = 0
Query:   29 ELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            ++F KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTRC H+E+H++KNA+HKHLIFVINK DLVP WVTKKWV+ LS T PTLAFHAS+ N FGKGALINLLRQFAKLH DKKQISVG++GYPNVGKSS+IN L+KK+
Sbjct:  196 DVFSKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNAAHKHLIFVINKCDLVPNWVTKKWVQKLSETTPTLAFHASMNNPFGKGALINLLRQFAKLHQDKKQISVGLIGYPNVGKSSVINALRKKR 334          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: A0A0P1B5V0_PLAHL (Nucleolar GTP-binding protein 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5V0_PLAHL)

HSP 1 Score: 238 bits (606), Expect = 2.420e-73
Identity = 110/139 (79.14%), Postives = 127/139 (91.37%), Query Frame = 0
Query:   29 ELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            ++F KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTRC H+E+H++KNA+HKHLIFVINK DLVP WVTK+WV+ LS T PTLAFHAS++  FGKGALINLLRQFAKLH +KKQISVG++GYPNVGKSS+IN L+KKK
Sbjct:  196 DVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNAAHKHLIFVINKCDLVPNWVTKRWVQKLSETTPTLAFHASMSKPFGKGALINLLRQFAKLHQEKKQISVGLIGYPNVGKSSVINALRKKK 334          
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Match: A0A7R9UBE2_9STRA (Nucleolar GTP-binding protein 2 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE2_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.740e-73
Identity = 108/155 (69.68%), Postives = 134/155 (86.45%), Query Frame = 0
Query:   13 DTNAPKAWEERGLKRAELFEKGQSRRIWAELYKVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKK 167
            DTN  +  +       ++F KGQS+RIW+ELYKVLDCSDVV+QVLDARN+PGTR  H+ER+L+K+A+HKHL+F++NK DLVP WV +KWV+ LS+ +PT+AFHASI+NSFGKGALINLLRQF+KLH DKK+ISVG++GYPNVGKSSIINTL KKK
Sbjct:  193 DTNVERELDHYEAVSHDVFAKGQSKRIWSELYKVLDCSDVVLQVLDARNIPGTRSSHIERYLRKHAAHKHLVFIVNKCDLVPAWVARKWVRALSSDYPTIAFHASISNSFGKGALINLLRQFSKLHGDKKEISVGIIGYPNVGKSSIINTLMKKK 347          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15522.4111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U1NL74_9STRA1.620e-7776.77Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7U800_9STRA1.090e-7682.39Nucleolar GTP-binding protein 2 n=2 Tax=Monodopsid... [more]
D8LTC1_ECTSI1.600e-7699.19Nucleolar GTP-binding protein 2 n=2 Tax=Ectocarpus... [more]
A0A8K1C6Q5_PYTOL1.090e-7582.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WX25_GLOUD4.970e-7581.29Nucleolar GTP-binding protein 2 n=1 Tax=Globispora... [more]
D0NUW0_PHYIT5.020e-7580.58Nucleolar GTP-binding protein 2 n=1 Tax=Phytophtho... [more]
M4BSB5_HYAAE1.100e-7480.58Nucleolar GTP-binding protein 2 n=22 Tax=Peronospo... [more]
A0A5D6XVC1_9STRA1.570e-7480.58Nucleolar GTP-binding protein 2 n=1 Tax=Pythium br... [more]
A0A0P1B5V0_PLAHL2.420e-7379.14Nucleolar GTP-binding protein 2 n=1 Tax=Plasmopara... [more]
A0A7R9UBE2_9STRA2.740e-7369.68Nucleolar GTP-binding protein 2 (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 30..169
e-value: 1.6E-31
score: 111.4
NoneNo IPR availablePANTHERPTHR11089GTP-BINDING PROTEIN-RELATEDcoord: 7..167
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 146..168
e-value: 4.1E-6
score: 26.8
IPR024929Nucleolar GTP-binding protein 2PANTHERPTHR11089:SF9NUCLEOLAR GTP-BINDING PROTEIN 2coord: 7..167
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 36..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15522contigEcto-sp13_S_contig15522:1712..3782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15522.4111.1mRNA_Ecto-sp13_S_contig15522.4111.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15522 3..3782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15522.4111.1 ID=prot_Ecto-sp13_S_contig15522.4111.1|Name=mRNA_Ecto-sp13_S_contig15522.4111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp
QVGRKTYGEGEGDTNAPKAWEERGLKRAELFEKGQSRRIWAELYKVLDCS
DVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKK
WVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVG
YPNVGKSSIINTLKKKKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR024929NOG2
IPR027417P-loop_NTPase