prot_Ecto-sp13_S_contig15510.4107.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15510.4107.1
Unique Nameprot_Ecto-sp13_S_contig15510.4107.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length263
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15510.4107.1 vs. uniprot
Match: D8LBI3_ECTSI (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 3.310e-103
Identity = 245/262 (93.51%), Postives = 249/262 (95.04%), Query Frame = 0 
Query:    1 MLLGRVGTLLPSCGGRVATRRFLAKKXXXXXXXXKKGSGTPKKGPAAIKARGAMPVSKAGKQGSNTGKSGAAXAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTKSEMLAARKARKASVTAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGHGKWGWGTRLLAGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWALYSSPVKEKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKG 262
            MLLGRVGTLLPSC GRVATRRFLAKKXXXXXXXXKKGSGTPKKGPAAIKARGAMPVSKAGKQGS TGK+G A AREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTKSEMLAARKARKASVTAKT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       WGWGT+L+AGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWALYSSPVK+KLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKG
Sbjct:    1 MLLGRVGTLLPSCSGRVATRRFLAKKXXXXXXXXKKGSGTPKKGPAAIKARGAMPVSKAGKQGSKTGKTGGAAAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTKSEMLAARKARKASVTAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGWGTKLVAGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWALYSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKG 262
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BLAST of mRNA_Ecto-sp13_S_contig15510.4107.1 vs. uniprot
Match: A0A6H5KLZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ0_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 8.410e-72
Identity = 196/219 (89.50%), Postives = 197/219 (89.95%), Query Frame = 0 
Query:    1 MLLGRVGTLLPSCGGRVATRRFLAKKXXXXXXXXKKGSGTPKKGPAAIKARGAMPVSKAGKQGSNTGKSGAAXAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTKSEMLAARKARKASVTAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGHGKWGWGTRLLAGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWAL 219
            MLLGRVGTLLPSCGGR+ATRRFLAKK        KKGSGTPKKGPAAIKARGAM VSKAGKQGSNTGKSG AXAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTKSEMLAARKAR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KG GKWGWGTRLLAGTSVGLAA GIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWAL
Sbjct:    1 MLLGRVGTLLPSCGGRLATRRFLAKKAAGRGGGGKKGSGTPKKGPAAIKARGAMSVSKAGKQGSNTGKSGGAXAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTKSEMLAARKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGQGKWGWGTRLLAGTSVGLAAFGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWAL 219
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15510.4107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBI3_ECTSI3.310e-10393.51Mitochondrial import inner membrane translocase su... [more]
A0A6H5KLZ0_9PHAE8.410e-7289.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15510contigEcto-sp13_S_contig15510:1554..4109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15510.4107.1mRNA_Ecto-sp13_S_contig15510.4107.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15510 1542..4109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15510.4107.1 ID=prot_Ecto-sp13_S_contig15510.4107.1|Name=mRNA_Ecto-sp13_S_contig15510.4107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp
MLLGRVGTLLPSCGGRVATRRFLAKKAAGGGGGGKKGSGTPKKGPAAIKA
RGAMPVSKAGKQGSNTGKSGAAAAREAAATTTSTAKAAAAEAAESAKPPP
VGGGGGFTKSEMLAARKARKASVTAKTAAAAATAKAVAPAAAAGAGRAGG
AGAAASAAEAGGAKGHGKWGWGTRLLAGTSVGLAALGIAWQLKPDEMRKL
LDDSPIDHFFIWFMGKWALYSSPVKEKLLLDCPLPPGALPPPTLVLDLEG
TLLGTIYTRKKG*
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