prot_Ecto-sp13_S_contig15503.4105.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15503.4105.1
Unique Nameprot_Ecto-sp13_S_contig15503.4105.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length204
Homology
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: D8LJ70_ECTSI (Similar to chromatin modifying protein 2B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ70_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 9.040e-122
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0
Query:    1 AAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPTGVARPSAVEDTKLDAKTEELLAQLGAL 203
            AAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQK+QLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTP GVARPS  ED KLDAKTEELLAQLGAL
Sbjct:   11 AAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKDQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPAGVARPSEAEDAKLDAKTEELLAQLGAL 213          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A835YLS1_9STRA (Chromatin modifying protein-like protein 2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS1_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.150e-56
Identity = 109/202 (53.96%), Postives = 143/202 (70.79%), Query Frame = 0
Query:    3 AKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTA-KGGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPTGVARPSAVEDTKLDAKTEELLAQLGAL 203
            A+ AKR VR GERD+++E+RNLDR EK L+ +IKKTA K G + ATR LA QLV LR Q+++LY+ ++ +  VG   T  A  A++AGVMG+V G MK VN  +S +E A ++QQFA+++E M M EE+MDDAL DAFDG+GVE E D +V QVL E+GL+M  KM DAPT  P    +  A +D+ LD + EELL QL AL
Sbjct:   12 ARSAKRQVRQGERDVERELRNLDRVEKQLIIDIKKTARKPGGEKATRNLAGQLVGLRKQRDKLYTMKSTITAVGYQTTAIAGQAAMAGVMGSVTGAMKDVNAQLSPQEMAAVLQQFALQSETMGMREELMDDALTDAFDGDGVEAETDAIVDQVLTEIGLDMTSKMADAPTGKPAA-GQQLAQDDSMLDQRAEELLKQLQAL 212          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A7S2EVL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVL5_TRICV)

HSP 1 Score: 150 bits (379), Expect = 4.450e-42
Identity = 99/209 (47.37%), Postives = 129/209 (61.72%), Query Frame = 0
Query:    1 AAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKG----GNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMV--DAPTNTPTGVARPSAVEDTKLDAKTEELLAQLGAL 203
            AA +  KR VR  +RD+D+EIR LDR+E  ++AEIKK AK     GN  A   LAKQLVQ+R QKE+++S +A L  VG  AT  A+  + A  +GNV   M   N ++      KIM +F  +NE M + EE+MDDAL DAFD + VEEEA+ V  QVLAELG+E+D KMV  DAP   P G    +  ++   DA   +L A+L AL
Sbjct:   16 AAKRSTKREVRGAQRDMDREIRELDRTEAQVLAEIKKRAKAPGVSGNDRALSALAKQLVQIRKQKEKMFSTKANLGAVGMQATAMASQVAAASAVGNVTKAMGTANASIDAAAVGKIMTEFQRQNEIMGVREELMDDALTDAFDADEVEEEAEAVTNQVLAELGVELDSKMVGLDAPKQKPVGEEMNAEEKEALYDA-LPDLRARLDAL 223          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A4D9D707_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D707_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.430e-40
Identity = 84/189 (44.44%), Postives = 124/189 (65.61%), Query Frame = 0
Query:    4 KDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNT-PTGVARPSAVEDTKLDA 191
            ++ KR +R  ERD+D+E++NL R E  L+ +IKK A     G  + +AK LVQLRAQK++L + +  + GVG  A+   + A++   MG + GVM  +NE +   +T+K+M +FA +NE MN+ E+++DDAL+DAFDG+GVEEEA+ VV QVL E+GLE+  KM D P      GV + S  +   L+A
Sbjct:   14 RETKREIRHNERDMDRELQNLAREEAKLIHDIKKMAANNQHGPLKVMAKNLVQLRAQKDKLITMKTTMTGVGYKASLMHSQAAVGQAMGRMTGVMGDMNEMMDATKTSKVMTEFARQNEYMNVKEDLLDDALMDAFDGDGVEEEAESVVNQVLEEIGLELGSKMADVPVGKLRDGVDKESIEDKAALEA 202          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A1Z5KR86_FISSO (Charged multivesicular body protein 2B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR86_FISSO)

HSP 1 Score: 136 bits (342), Expect = 1.330e-36
Identity = 87/195 (44.62%), Postives = 125/195 (64.10%), Query Frame = 0
Query:   12 SGERDLDKEIRNLDRSEKSLVAEIK---KTAKGGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPTGVARPSAVEDTKLDAKTEELLAQLGAL 203
            S + DLD+EIR LDR EK++  E+K   KTA   N    + LAKQ+VQ+R Q+ +L++A+A++  +G  AT AA+  +    MG++   MK  N+ +  ++T KIM +F  ENE++ + EEMMDD L+DAFD EG+EEEAD +  QVLAELG+E+D +MV    N P    +  A E+  LD    +L A+L AL
Sbjct:   26 SNQXDLDREIRELDRQEKTITVELKQRAKTASSANDPTLKALAKQMVQVRQQRNKLHTAKAQVGAMGMHATVAASQIAAVTAMGSITESMKVANKQMDIKKTTKIMAEFQRENERIQVKEEMMDDVLMDAFDSEGMEEEADQLTNQVLAELGVELDQQMVGL--NAPA--KKLQAEEEEVLDEVLPDLKARLDAL 216          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A1E7EY94_9STRA (Snf7-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EY94_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.600e-36
Identity = 88/190 (46.32%), Postives = 119/190 (62.63%), Query Frame = 0
Query:   21 IRNLDRSEKSLVAEIKKTAK---GGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVD--APTNTPTGVARP--SAVEDTKLDAKTEELLAQLGAL 203
            +R LDR E  +  E+K+ AK        A   LAKQLVQ+R Q+E++ +A+A +  VG  AT  AT  + A  +GNV+  MK  NEA++ +ET KI+ +F  ENEK+ + +EMMDDAL+DAFD E VEEEA+ +  QVLAELG+EMD KMV   AP+   +  A    S  E   LDA   +L ++L AL
Sbjct:   42 LRELDRQESQITKELKQRAKLTSSSKDPALAALAKQLVQIRKQREKIMTAKAHIGAVGMNATAMATQVAAASAIGNVSKAMKITNEAMNVQETTKILHEFQRENEKLEVKQEMMDDALMDAFDSEDVEEEAEELTNQVLAELGVEMDSKMVGLTAPSKIVSSSAEQNMSTEEQAALDAMLPDLKSRLDAL 231          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A7S2VFB0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFB0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.880e-36
Identity = 90/192 (46.88%), Postives = 121/192 (63.02%), Query Frame = 0
Query:   17 LDKEIRNLDRSEKSLVAEIKKTAKGGNQGAT---RTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMV--DAPTNTPTGVARPSAVEDTKLDAKTEELLAQLGAL 203
            +D+EIR LDR EK +  E+K+ AKG N  +    +TLAKQLVQ+R Q+ +L  A+A+L  +G  A   A+  +    +G+V   MK  N+ ++ +ET KIM +F  ENE++ +  EMMDD L+DAFD EG+EEEAD V  QVLAELG+EMD +MV  DAP  T  G     A  D   DA   +L A+L AL
Sbjct:   31 MDREIRELDRQEKQITMELKQRAKGANSSSDPTLKTLAKQLVQVRQQRSKLVGAKAQLGAMGMHAQVTASQVAAVQAVGSVTDAMKVANKQLNVKETTKIMTEFQRENERLAVKSEMMDDVLMDAFDSEGMEEEADQVTNQVLAELGVEMDQQMVGLDAP-KTKVGAEEVPAETDPIEDA-LPDLRARLNAL 220          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A7S1BMU4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMU4_9STRA)

HSP 1 Score: 134 bits (337), Expect = 8.310e-36
Identity = 85/208 (40.87%), Postives = 132/208 (63.46%), Query Frame = 0
Query:    2 AAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGG----NQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKM--VDAPTNTPTGVARPSAVEDTKLDAKTEELLAQLGAL 203
            AA++ KR VRS +R +D+E+R L+R E++L+A+IKK AK G    N  A + L+KQLV  R QK++L  +++++  +   AT  ++  + A  +G V   M   N+AV  ++ +  M +F  +NE M++ E++ +DAL DAFDG+ VEEEAD V  Q+LAELGLE+ GKM  ++ P+  P  VA    VED  + +   +L ++L AL
Sbjct:   14 AARETKREVRSAQRGIDRELRELERQERTLLADIKKRAKTGGITKNDSALKALSKQLVHTRGQKDRLQESKSQIGSMALKATAMSSQVAAAQAVGKVTQAMGNANQAVDIKKLSAQMGEFMRQNEMMDLKEDLFNDALADAFDGDEVEEEADAVTDQILAELGLELSGKMEGLNVPSAAPP-VAEEEVVEDDGISSNIPDLQSRLNAL 220          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A024UK03_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK03_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.020e-32
Identity = 79/200 (39.50%), Postives = 114/200 (57.00%), Query Frame = 0
Query:    3 AKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPTGVARPSAV--EDTKLDAKTEELLAQL 200
            AK+AKR +   +R+L++E   L+R EK L+A+IKK AK GN G T+ LAKQL+QLR QK+++   ++ L  +G   T+ A   ++   +      M   ++ +      K++  F  ++E M M EEM+DD LIDAFD E VE E D VV QVL E+GL++   M DAPT      A   A+  + T L   T+   A L
Sbjct:   15 AKEAKRGIAQSQRELEREKMALERQEKQLIADIKKAAKEGNTGGTKILAKQLIQLRQQKDKMTMLKSNLGSIGLQTTSMAAQMTMVAAIEKTTKTMASTSKQMDMNRFQKVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLGSLMADAPTRQANATAAMDALLPDVTLLPTPTKVTAASL 214          
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Match: A0A067D5G0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D5G0_SAPPC)

HSP 1 Score: 125 bits (313), Expect = 2.500e-32
Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    3 AKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNT 174
            A++AKR +  G+RDL++E   L+R EK L+ +IKK AK GNQ  T+ LAKQLVQ+RAQKE+L   +  L G+G  A+  A   ++   M      M   N+ +      K + +F  ++E M+M +EMM+D LIDAFD + VEE  D VV QVLAE+GL++  ++ DAPT +
Sbjct:   16 AREAKREIAHGQRDLEREKMVLERQEKQLILDIKKAAKDGNQAGTKILAKQLVQVRAQKEKLMVMKVSLGGIGMQASAMAAQQTMVATMEKTTKTMVAANKQMDMSRIQKTLMEFEKQSELMSMGQEMMEDTLIDAFDDDEVEE--DLVVDQVLAEIGLDLHTQLADAPTQS 185          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15503.4105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ70_ECTSI9.040e-12297.54Similar to chromatin modifying protein 2B n=2 Tax=... [more]
A0A835YLS1_9STRA4.150e-5653.96Chromatin modifying protein-like protein 2B n=1 Ta... [more]
A0A7S2EVL5_TRICV4.450e-4247.37Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A4D9D707_9STRA1.430e-4044.44Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1Z5KR86_FISSO1.330e-3644.62Charged multivesicular body protein 2B n=2 Tax=Fis... [more]
A0A1E7EY94_9STRA5.600e-3646.32Snf7-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S2VFB0_9STRA5.880e-3646.88Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1BMU4_9STRA8.310e-3640.87Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A024UK03_9STRA2.020e-3239.50Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A067D5G0_SAPPC2.500e-3244.19Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 6..174
e-value: 4.5E-32
score: 111.0
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 3..201
NoneNo IPR availablePANTHERPTHR10476:SF9CHARGED MULTIVESICULAR BODY PROTEIN 2Bcoord: 3..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15503contigEcto-sp13_S_contig15503:756..3224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15503.4105.1mRNA_Ecto-sp13_S_contig15503.4105.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15503 756..3224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15503.4105.1 ID=prot_Ecto-sp13_S_contig15503.4105.1|Name=mRNA_Ecto-sp13_S_contig15503.4105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
AAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTL
AKQLVQLRAQKEQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKK
VNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADG
VVGQVLAELGLEMDGKMVDAPTNTPTGVARPSAVEDTKLDAKTEELLAQL
GAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam