prot_Ecto-sp13_S_contig15502.4104.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15502.4104.1
Unique Nameprot_Ecto-sp13_S_contig15502.4104.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: D7G0Z3_ECTSI (Putative: beta-tubulin folding cofactor E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z3_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 8.960e-65
Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMVEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLR 109
            GVEFDDPARGKHDGAVEK DGSSLRYFTCVNGGSGSFLKPG+FSTGISM EALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGE+KIR+RQQVDTLDHCTLR
Sbjct:   47 GVEFDDPARGKHDGAVEKPDGSSLRYFTCVNGGSGSFLKPGKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGESKIRRRQQVDTLDHCTLR 155          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A6H5L3Q3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q3_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.050e-58
Identity = 103/137 (75.18%), Postives = 106/137 (77.37%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMVEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKK----------------------------AIEFYGETKIRQRQQVDTLDHCTLR 109
            GVEFDDPARGKHDGAVEK DGSS+RYFTCVNGGSGSFLKP +FSTGISM EALRQQYVDMNAPLLAPENLLPDAYASTSKGGKK                            AIEFYGE+KIRQRQQVDTLDHCTLR
Sbjct:   47 GVEFDDPARGKHDGAVEKPDGSSVRYFTCVNGGSGSFLKPSKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKVQTCMPLGKCATPFRRKRDLCPMSSADQAIEFYGESKIRQRQQVDTLDHCTLR 183          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A835YMA8_9STRA (Putative beta-tubulin folding cofactor E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.100e-33
Identity = 64/109 (58.72%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMVEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLR 109
            GVEFDD ARGKHDGAVE   G  +RY +C +GGSGSFLKP +   G ++ +AL   YV ++APL+AP+N L   YA T +G  K IEF+GE KIR RQQV  LD CTLR
Sbjct:   43 GVEFDDAARGKHDGAVESEQGELVRYLSCTDGGSGSFLKPHKIDAGAALADALAAHYVAVDAPLVAPDNKLVGQYAQTVRGRHKQIEFFGEGKIRLRQQVSALDACTLR 151          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A4D9DAF6_9STRA (CAP-Gly domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAF6_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.500e-27
Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGS--GSFLKPGRFSTGISMVEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLR---VSW 112
            GVE+DDP RGKHDG+V    G   R+F+C+  G    SFLKP +   G+S++  L ++YV  +APL AP  +  +AYA+TS+GG+K IEF+GET+IR RQQ+  L+  +LR   V+W
Sbjct:   44 GVEWDDPGRGKHDGSVLTAAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVAPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAW 160          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A482RY02_9ARCH (CAP-Gly domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY02_9ARCH)

HSP 1 Score: 92.4 bits (228), Expect = 1.260e-21
Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMVEALRQQYVDMNAPLLAPEN-LLPDAYASTSKGGKKAIEFYGETKIR 95
            GVE+D+P+RGKHDG+     G   RYF C +  +GSF++P + S+GIS+  AL ++YV + +  +A E  +LPD++ STSKG  K IEF GE KIR
Sbjct:   40 GVEWDNPSRGKHDGSCVDEHGIIHRYFRCAST-AGSFIRPSKVSSGISLERALHERYVSLESEEIAQEGGMLPDSFVSTSKGNMKPIEFVGEKKIR 134          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A448Z797_9STRA (CAP-Gly domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z797_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.200e-20
Identity = 50/111 (45.05%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVE-KTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMV-EALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLR 109
            G+ +DD +RGKHDG+V  +     +R+F+C     GSFL+P +   GI++  + LR++YV+MNAP++AP N+LP + A+TS G +K IEF GE +IR+ QQ+  +D  +LR
Sbjct:   50 GIVWDDTSRGKHDGSVVCRRTNKIVRHFSC-GPTQGSFLRPKKIDFGIALTAKLLREKYVEMNAPVIAPNNILPHS-ATTSSGREKTIEFLGELQIRKHQQLQNIDKISLR 158          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A7S3ZSI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSI4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.290e-19
Identity = 58/141 (41.13%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMVEALRQQYVDMNAPLLAP-------------------------ENLLPDAY---ASTSKGGKKAIEFYGETKIRQRQQVD--TLDHCTLRVS 111
            GVE+DD  RGKHDGAVEK D   +RYFTC   G+GSF+KP +   G S+VEALRQ+YV ++AP+ AP                         E +    +   A T +G  KAI+F GE  +R+ QQ+D   +D   LR +
Sbjct:   49 GVEWDDATRGKHDGAVEK-DSQEIRYFTCP-AGAGSFVKPKKVDRGSSLVEALRQKYVGLDAPVEAPLGVDKNEADSRDFLKGSTEQTKRNGEEITRGTFEHKAYTKRGNTKAIQFCGELNVRKEQQLDDGVVDRVVLRCA 187          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: B8C5G5_THAPS (CAP-Gly domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5G5_THAPS)

HSP 1 Score: 87.4 bits (215), Expect = 1.040e-17
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVE-KTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMV-EALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLR---VSWTCS 115
            G+ +DD  RGKHDG+V  +T    +R+F C     GSFL+  +   G+++  E +R +YV   A L+AP+N+LP   A T+ G  KAIEF+GE KIR RQQ++ ++  +LR   +S  CS
Sbjct:   42 GISWDDVTRGKHDGSVICRTTNQLVRHFKC-GPTQGSFLRLSKVDVGVALSPELMRSRYVKPGAELVAPDNILPHV-ARTAGGRDKAIEFWGEIKIRNRQQLEVVEEISLRMLGISGPCS 159          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: A0A1E7FAE4_9STRA (L domain-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAE4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.410e-17
Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAV--EKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMVEAL-RQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLR 109
            G+ +DD +RGKHDG+V   KT+   +R+F C     GSFL+  +   G+++   L R +YV MNAP++AP NLLP + A TS G +K+IEF GE +IR+ QQ++ +   +LR
Sbjct:   54 GIVWDDHSRGKHDGSVICRKTN-QIVRHFAC-GPTQGSFLRLRKLDLGVTLTTTLLRDKYVKMNAPIIAPNNLLPHS-AKTSSGREKSIEFLGELQIRKHQQLENIVKISLR 162          
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Match: K0R4Q5_THAOC (CAP-Gly domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4Q5_THAOC)

HSP 1 Score: 86.3 bits (212), Expect = 2.620e-17
Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 0
Query:    1 GVEFDDPARGKHDGAVEKTDGSSL-RYFTCVNGGSGSFLKPGRFSTGISMV-EALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQVDTLDHCTLRV 110
            G+ +DD  RGKHDG+V   D + L R+F C     GSFL+  +   G  +  + +R +YV+ +A L+AP+N+LP   A T+ G  K IEF+GE KIR+RQQ++ +D  +LR+
Sbjct:   42 GISWDDATRGKHDGSVIDRDTNQLVRHFKC-GPTQGSFLRLNKVDLGCELTPQLMRSRYVEPDAELIAPDNVLPHV-ARTAGGRSKPIEFHGELKIRKRQQLEVVDAISLRM 151          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15502.4104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Z3_ECTSI8.960e-6595.41Putative: beta-tubulin folding cofactor E n=1 Tax=... [more]
A0A6H5L3Q3_9PHAE1.050e-5875.18CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YMA8_9STRA1.100e-3358.72Putative beta-tubulin folding cofactor E n=1 Tax=T... [more]
A0A4D9DAF6_9STRA3.500e-2748.72CAP-Gly domain-containing protein n=2 Tax=Monodops... [more]
A0A482RY02_9ARCH1.260e-2148.96CAP-Gly domain-containing protein n=1 Tax=archaeon... [more]
A0A448Z797_9STRA2.200e-2045.05CAP-Gly domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A7S3ZSI4_9STRA1.290e-1941.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B8C5G5_THAPS1.040e-1742.50CAP-Gly domain-containing protein n=1 Tax=Thalassi... [more]
A0A1E7FAE4_9STRA1.410e-1744.64L domain-like protein n=1 Tax=Fragilariopsis cylin... [more]
K0R4Q5_THAOC2.620e-1742.86CAP-Gly domain-containing protein n=1 Tax=Thalassi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 1..51
e-value: 4.1E-6
score: 28.1
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 1..98
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 1..41
e-value: 3.7E-6
score: 26.9
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 1..39
score: 9.012
NoneNo IPR availablePANTHERPTHR15140TUBULIN-SPECIFIC CHAPERONE Ecoord: 1..105
NoneNo IPR availablePANTHERPTHR15140:SF6TUBULIN-SPECIFIC CHAPERONE Ecoord: 1..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15502contigEcto-sp13_S_contig15502:139..1987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15502.4104.1mRNA_Ecto-sp13_S_contig15502.4104.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15502 139..1987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15502.4104.1 ID=prot_Ecto-sp13_S_contig15502.4104.1|Name=mRNA_Ecto-sp13_S_contig15502.4104.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
GVEFDDPARGKHDGAVEKTDGSSLRYFTCVNGGSGSFLKPGRFSTGISMV
EALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGETKIRQRQQV
DTLDHCTLRVSWTCSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036859CAP-Gly_dom_sf
IPR000938CAP-Gly_domain