prot_Ecto-sp13_S_contig1550.4103.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1550.4103.1
Unique Nameprot_Ecto-sp13_S_contig1550.4103.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length965
Homology
BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot
Match: A0A6H5L2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U9_9PHAE)

HSP 1 Score: 1439 bits (3724), Expect = 0.000e+0
Identity = 841/1010 (83.27%), Postives = 872/1010 (86.34%), Query Frame = 0
Query:    4 QDRKRKGCVGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRS----------------------------------------------WKSYTRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARCRYRATQTIIHGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITAGIAREERRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALEVAQTAVAAATATVPGTTPANASVERDSKDGXXXXXXLGGTWPKTVFPGLLLRKGKPKDMISDARPNGGGDXXXXXXNSRPKAAPAGRGARGGRTXGAQAPAKAAVPPSSRGATAEAEREAWRRILARDRRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDVAGAADAARKLLLRDDPNAFLSRPSSPPFFETPQRQDRGCQKSPSRPTMPTDDQQSVAPSTGSTSGSTSTVAGRQQELRAPADQQQLRHGCPAAES---EAEAGHPERGGKGIASFHLVVADKADIRRGGXXXXXXXSDGADHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCYPVADPAFAEGAAELRREFLCPGAPREATLPAETRRDLMRTLDTLPDDVLDGTAGGRDDGDESGDXDAGGGEEVGGDGRAPDAELPFADEKRRRETGADLSDGDEGGRRSASTAGNAATRDSSGGSGGPRATAKSKARTKFSRNKIVGPSATRQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRRAAALHQQELKRRREAAHEIVRLERRGRLANEAAEVRRHLSRGRDVKMESLAQSALDVASGSVVEALLRNAVAGAEVLEIQEVSASRHASGLIGMLLLFSVW 964
            +DRKRKGC+GFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAG TLRNIAAYRSF                                                W+SY RTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLAR RYRATQTIIHGFN LMAARRARQF+RQALAAAHR ATEELLQSG DAEITAGIAREE+RLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALE AQTA AAATATVPGTTPANASVERDSKDGXXXXXXLGG WPKTVFPG LL KG+ KD            XXXXXX SRPKAAPAG   RGGRT GAQAPAKAAVPPSSRG TAEAEREAWRRILAR+RRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQ+EHYL+HWD AGAADAARKLLLR  P+  LSRPSSPP FETP+RQDRGCQKSPSRPTMPTDDQQSVAPST ST+GSTST+A RQQ+LRAP +QQQLRHGCPAAE    EAEAGHPERGGKGIASFHLVVADKAD+RRG   XXXXXS+  DHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRC PVADPAFAEGAAELRREFLCPGAPREA+LPAETRRDLMRTLDTLPDDVLDGTAGGR DGDE GD DA GGEEVGGDGRAPDAELPF DEKRR ET  DLSDGDEGGRRS STAGNAATRDSSGGSGGPRATAKS ARTKFSRNKI  PSATRQP            XXXXXXXXXXXXXXXXXXXXXXXXAR+P GLRPTSFDEAQFQALAHLSRVVGPGF+ASDLGRRAAALHQ+ELKRRREAAH+I RLERR RLANEAAEVRR LSRGRDV++ES+AQSALDVASGSVVEALLR+AVAGAEVLE QE+  +R    +     + +VW
Sbjct:  456 RDRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGSTLRNIAAYRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASLFLPFWNTFWQSYIRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARSRYRATQTIIHGFNHLMAARRARQFVRQALAAAHRKATEELLQSGYDAEITAGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALEAAQTASAAATATVPGTTPANASVERDSKDGXXXXXXLGGAWPKTVFPGRLLGKGRRKDXXXXXXXXXXXXXXXXXXXSRPKAAPAGGEVRGGRTEGAQAPAKAAVPPSSRGGTAEAEREAWRRILARERRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQNEHYLSHWDAAGAADAARKLLLRHVPDPLLSRPSSPPLFETPKRQDRGCQKSPSRPTMPTDDQQSVAPSTVSTTGSTSTIAWRQQQLRAPVEQQQLRHGCPAAEEAKLEAEAGHPERGGKGIASFHLVVADKADVRRG---XXXXXSEVTDHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLDGTAGGRGDGDEGGDDDAVGGEEVGGDGRAPDAELPFTDEKRRPETRVDLSDGDEGGRRSISTAGNAATRDSSGGSGGPRATAKSNARTKFSRNKIARPSATRQP-QQQRRPVSVPGXXXXXXXXXXXXXXXXXXXXXXXXARDPDGLRPTSFDEAQFQALAHLSRVVGPGFFASDLGRRAAALHQEELKRRREAAHDIARLERRSRLANEAAEVRRQLSRGRDVEIESIAQSALDVASGSVVEALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVW 1461          
BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot
Match: D8LGM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM7_ECTSI)

HSP 1 Score: 1375 bits (3558), Expect = 0.000e+0
Identity = 820/1001 (81.92%), Postives = 847/1001 (84.62%), Query Frame = 0
Query:    4 QDRKRKGCVGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWK-------------------------SYTRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARCRYRATQTIIHGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITAGIAREERRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALEVAQTAVAAATATVPGTTPANASVERDSKDGXXXXXXLGGTWPKTVFPGLLLRKGKPKDMISDARPNGGGDXXXXXXNSRP------KAAPAGRGARGGRTXGAQAPAKAAVPPSSRGATAEAEREAWRRILARDRRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDVAGAADAARKLLLRDDPNAFLSRPSSPPFFETPQRQDRGCQKSPSRPTMPTDDQQSVAPSTGSTSGSTSTVAGRQQELRAPADQQQLRHGCPAAE---SEAEAGHPERGGKGIASFHLVVADKADIRRGGXXXXXXX---SDGADHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCYPVADPAFAEGAAELRREFLCPGAPREATLPAETRRDLMRTLDTLPDDVLDGTAGGRDDGDESGDXDAGGGEEVGGDGRAPDAELPFADEKRRRETGADL--SDGDEGGRRSASTAGNAATRDSSGGSGGPRATAKSKARTKFSRNKIVGPSATRQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRRAAALHQQELKRRREAAHEIVRLERRGRLANEAAEVRRHLSRGRDVKMESLAQSALDVASGSVVEALLRNAVAGAEVLEIQEVSASRHASGLIGMLLLFSVW 964
            +DRKRKGC+GFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWK                         SYTRT RQAHRLYARAVGGTSMAAWVQYVGMAKRQR QKSAAVTIQRHARGYLAR RYRATQTII GFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEIT GIAREE+RLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPA RGGGELRREARAVQEEWKALE AQ  +AAAT T PGTT ANASVERDSKD XXXXXXLGGT PKTVFPGLLLRKGKPKD+   ARP+GG  XXXXXX  RP      KAAPA  G RGGRT GAQAPAKA VPPSSRG TAEAEREAWRRILAR++ LAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWD   AA AARKLL+RDDP+A LSRPSSPPF  TPQRQDRGCQKSP RPTMPTDDQQSVAPS GS +GSTSTVA +QQ+LRAPA+QQQLRHG PAAE   +EAEAGH ERGGKGIASFHLVVADKADIRRG XXXXXXX   S+ A+HEEAGAGFDLVSAYVTRVWGHGQAYNTLLF+DAVDAWRRC PVADPAFAEGAAELRREFLCPGAPREA+LPAETRRDLMRTLDTLPDDVLDGTAGG DDGDESGD DAGGGEEVGGDGRAPDAELPFADEKR RET  DL  SDGDEGGRRS  TAGNAATRD SGGSGGPRA AKSKA+TKFSRNKI  PSAT QP             XXXXXXXXXXXXXXXXXXXXXXX ARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGR AA+LHQQELKRRREAA EIVRLERRGRLANEAA                              EALLR+AVAGAEVLE QE+  +R    +     + +VW
Sbjct:  197 KDRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWKAVRSVGVAVALVRLDFEASFRCTSQSYTRTARQAHRLYARAVGGTSMAAWVQYVGMAKRQRRQKSAAVTIQRHARGYLARGRYRATQTIIRGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITVGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPAFRGGGELRREARAVQEEWKALEAAQ--IAAATTTAPGTTLANASVERDSKDXXXXXXXLGGTLPKTVFPGLLLRKGKPKDITRAARPDGGXXXXXXXXXXRPTTEAEKKAAPASGGVRGGRTGGAQAPAKACVPPSSRGGTAEAEREAWRRILAREKLLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDAGAAAAAARKLLVRDDPDALLSRPSSPPFSGTPQRQDRGCQKSPLRPTMPTDDQQSVAPSIGSITGSTSTVAWQQQQLRAPAEQQQLRHGFPAAEEAEAEAEAGHSERGGKGIASFHLVVADKADIRRGXXXXXXXXXXXSEIANHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFIDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLDGTAGGWDDGDESGDDDAGGGEEVGGDGRAPDAELPFADEKRPRETRVDLDLSDGDEGGRRSIRTAGNAATRDISGGSGGPRAIAKSKAQTKFSRNKIARPSATLQPQQQRRPVSAPGGAXXXXXXXXXXXXXXXXXXXXXXXXARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRLAASLHQQELKRRREAAREIVRLERRGRLANEAA------------------------------EALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVW 1165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2U9_9PHAE0.000e+083.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGM7_ECTSI0.000e+081.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 223..250
NoneNo IPR availableCOILSCoilCoilcoord: 868..888
NoneNo IPR availableGENE3D1.20.5.190coord: 138..179
e-value: 1.7E-5
score: 26.4
NoneNo IPR availableTMHMMTMhelixcoord: 126..143
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 6..28
e-value: 0.33
score: 20.0
coord: 151..173
e-value: 6.6E-5
score: 32.3
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 9..27
e-value: 0.012
score: 15.4
coord: 154..173
e-value: 5.4E-6
score: 25.7
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 152..181
score: 9.78
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 7..36
score: 7.584
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 618..859

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1550contigEcto-sp13_S_contig1550:11523..16459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1550.4103.1mRNA_Ecto-sp13_S_contig1550.4103.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1550 11523..16459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1550.4103.1 ID=prot_Ecto-sp13_S_contig1550.4103.1|Name=mRNA_Ecto-sp13_S_contig1550.4103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=965bp
MVTQDRKRKGCVGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSW
ARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRT
LRNIAAYRSFRSWKSYTRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQR
GQKSAAVTIQRHARGYLARCRYRATQTIIHGFNRLMAARRARQFLRQALA
AAHRMATEELLQSGCDAEITAGIAREERRLAKLQKEIKAADAAVRRAVTK
RLTGGWLTIRPASRGGGELRREARAVQEEWKALEVAQTAVAAATATVPGT
TPANASVERDSKDGGGGGGGLGGTWPKTVFPGLLLRKGKPKDMISDARPN
GGGDGGGGGSNSRPKAAPAGRGARGGRTGGAQAPAKAAVPPSSRGATAEA
EREAWRRILARDRRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYL
AHWDVAGAADAARKLLLRDDPNAFLSRPSSPPFFETPQRQDRGCQKSPSR
PTMPTDDQQSVAPSTGSTSGSTSTVAGRQQELRAPADQQQLRHGCPAAES
EAEAGHPERGGKGIASFHLVVADKADIRRGGGGGGGGGSDGADHEEAGAG
FDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCYPVADPAFAEGAAELRR
EFLCPGAPREATLPAETRRDLMRTLDTLPDDVLDGTAGGRDDGDESGDDD
AGGGEEVGGDGRAPDAELPFADEKRRRETGADLSDGDEGGRRSASTAGNA
ATRDSSGGSGGPRATAKSKARTKFSRNKIVGPSATRQPPQQRRPVSALGG
AAPPPTASSAAAAAAAAAAAAVAAARNPHGLRPTSFDEAQFQALAHLSRV
VGPGFWASDLGRRAAALHQQELKRRREAAHEIVRLERRGRLANEAAEVRR
HLSRGRDVKMESLAQSALDVASGSVVEALLRNAVAGAEVLEIQEVSASRH
ASGLIGMLLLFSVW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR036305RGS_sf