mRNA_Ecto-sp13_S_contig1550.4103.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1550.4103.1
Unique Name	mRNA_Ecto-sp13_S_contig1550.4103.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot
Match: A0A6H5L2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U9_9PHAE)

HSP 1 Score: 1439 bits (3724), Expect = 0.000e+0
Identity = 841/1010 (83.27%), Postives = 872/1010 (86.34%), Query Frame = 1

Query:   10 QDRKRKGCVGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRS----------------------------------------------WKSYTRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARCRYRATQTIIHGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITAGIAREERRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALEVAQTAVAAATATVPGTTPANASVERDSKDGXXXXXXLGGTWPKTVFPGLLLRKGKPKDMISDARPNGGGDXXXXXXNSRPKAAPAGRGARGGRTXGAQAPAKAAVPPSSRGATAEAEREAWRRILARDRRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDVAGAADAARKLLLRDDPNAFLSRPSSPPFFETPQRQDRGCQKSPSRPTMPTDDQQSVAPSTGSTSGSTSTVAGRQQELRAPADQQQLRHGCPAAES---EAEAGHPERGGKGIASFHLVVADKADIRRGGXXXXXXXSDGADHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCYPVADPAFAEGAAELRREFLCPGAPREATLPAETRRDLMRTLDTLPDDVLDGTAGGRDDGDESGDXDAGGGEEVGGDGRAPDAELPFADEKRRRETGADLSDGDEGGRRSASTAGNAATRDSSGGSGGPRATAKSKARTKFSRNKIVGPSATRQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRRAAALHQQELKRRREAAHEIVRLERRGRLANEAAEVRRHLSRGRDVKMESLAQSALDVASGSVVEALLRNAVAGAEVLEIQEVSASRHASGLIGMLLLFSVW 2892
            +DRKRKGC+GFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAG TLRNIAAYRSF                                                W+SY RTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLAR RYRATQTIIHGFN LMAARRARQF+RQALAAAHR ATEELLQSG DAEITAGIAREE+RLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALE AQTA AAATATVPGTTPANASVERDSKDGXXXXXXLGG WPKTVFPG LL KG+ KD            XXXXXX SRPKAAPAG   RGGRT GAQAPAKAAVPPSSRG TAEAEREAWRRILAR+RRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQ+EHYL+HWD AGAADAARKLLLR  P+  LSRPSSPP FETP+RQDRGCQKSPSRPTMPTDDQQSVAPST ST+GSTST+A RQQ+LRAP +QQQLRHGCPAAE    EAEAGHPERGGKGIASFHLVVADKAD+RRG   XXXXXS+  DHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRC PVADPAFAEGAAELRREFLCPGAPREA+LPAETRRDLMRTLDTLPDDVLDGTAGGR DGDE GD DA GGEEVGGDGRAPDAELPF DEKRR ET  DLSDGDEGGRRS STAGNAATRDSSGGSGGPRATAKS ARTKFSRNKI  PSATRQP            XXXXXXXXXXXXXXXXXXXXXXXXAR+P GLRPTSFDEAQFQALAHLSRVVGPGF+ASDLGRRAAALHQ+ELKRRREAAH+I RLERR RLANEAAEVRR LSRGRDV++ES+AQSALDVASGSVVEALLR+AVAGAEVLE QE+  +R    +     + +VW
Sbjct:  456 RDRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGSTLRNIAAYRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASLFLPFWNTFWQSYIRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARSRYRATQTIIHGFNHLMAARRARQFVRQALAAAHRKATEELLQSGYDAEITAGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALEAAQTASAAATATVPGTTPANASVERDSKDGXXXXXXLGGAWPKTVFPGRLLGKGRRKDXXXXXXXXXXXXXXXXXXXSRPKAAPAGGEVRGGRTEGAQAPAKAAVPPSSRGGTAEAEREAWRRILARERRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQNEHYLSHWDAAGAADAARKLLLRHVPDPLLSRPSSPPLFETPKRQDRGCQKSPSRPTMPTDDQQSVAPSTVSTTGSTSTIAWRQQQLRAPVEQQQLRHGCPAAEEAKLEAEAGHPERGGKGIASFHLVVADKADVRRG---XXXXXSEVTDHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLDGTAGGRGDGDEGGDDDAVGGEEVGGDGRAPDAELPFTDEKRRPETRVDLSDGDEGGRRSISTAGNAATRDSSGGSGGPRATAKSNARTKFSRNKIARPSATRQP-QQQRRPVSVPGXXXXXXXXXXXXXXXXXXXXXXXXARDPDGLRPTSFDEAQFQALAHLSRVVGPGFFASDLGRRAAALHQEELKRRREAAHDIARLERRSRLANEAAEVRRQLSRGRDVEIESIAQSALDVASGSVVEALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVW 1461

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot
Match: D8LGM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM7_ECTSI)

HSP 1 Score: 1375 bits (3558), Expect = 0.000e+0
Identity = 820/1001 (81.92%), Postives = 847/1001 (84.62%), Query Frame = 1

Query:   10 QDRKRKGCVGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWK-------------------------SYTRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQRGQKSAAVTIQRHARGYLARCRYRATQTIIHGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITAGIAREERRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPASRGGGELRREARAVQEEWKALEVAQTAVAAATATVPGTTPANASVERDSKDGXXXXXXLGGTWPKTVFPGLLLRKGKPKDMISDARPNGGGDXXXXXXNSRP------KAAPAGRGARGGRTXGAQAPAKAAVPPSSRGATAEAEREAWRRILARDRRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDVAGAADAARKLLLRDDPNAFLSRPSSPPFFETPQRQDRGCQKSPSRPTMPTDDQQSVAPSTGSTSGSTSTVAGRQQELRAPADQQQLRHGCPAAE---SEAEAGHPERGGKGIASFHLVVADKADIRRGGXXXXXXX---SDGADHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCYPVADPAFAEGAAELRREFLCPGAPREATLPAETRRDLMRTLDTLPDDVLDGTAGGRDDGDESGDXDAGGGEEVGGDGRAPDAELPFADEKRRRETGADL--SDGDEGGRRSASTAGNAATRDSSGGSGGPRATAKSKARTKFSRNKIVGPSATRQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRRAAALHQQELKRRREAAHEIVRLERRGRLANEAAEVRRHLSRGRDVKMESLAQSALDVASGSVVEALLRNAVAGAEVLEIQEVSASRHASGLIGMLLLFSVW 2892
            +DRKRKGC+GFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWK                         SYTRT RQAHRLYARAVGGTSMAAWVQYVGMAKRQR QKSAAVTIQRHARGYLAR RYRATQTII GFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEIT GIAREE+RLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPA RGGGELRREARAVQEEWKALE AQ  +AAAT T PGTT ANASVERDSKD XXXXXXLGGT PKTVFPGLLLRKGKPKD+   ARP+GG  XXXXXX  RP      KAAPA  G RGGRT GAQAPAKA VPPSSRG TAEAEREAWRRILAR++ LAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWD   AA AARKLL+RDDP+A LSRPSSPPF  TPQRQDRGCQKSP RPTMPTDDQQSVAPS GS +GSTSTVA +QQ+LRAPA+QQQLRHG PAAE   +EAEAGH ERGGKGIASFHLVVADKADIRRG XXXXXXX   S+ A+HEEAGAGFDLVSAYVTRVWGHGQAYNTLLF+DAVDAWRRC PVADPAFAEGAAELRREFLCPGAPREA+LPAETRRDLMRTLDTLPDDVLDGTAGG DDGDESGD DAGGGEEVGGDGRAPDAELPFADEKR RET  DL  SDGDEGGRRS  TAGNAATRD SGGSGGPRA AKSKA+TKFSRNKI  PSAT QP             XXXXXXXXXXXXXXXXXXXXXXX ARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGR AA+LHQQELKRRREAA EIVRLERRGRLANEAA                              EALLR+AVAGAEVLE QE+  +R    +     + +VW
Sbjct:  197 KDRKRKGCLGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSWARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRTLRNIAAYRSFRSWKAVRSVGVAVALVRLDFEASFRCTSQSYTRTARQAHRLYARAVGGTSMAAWVQYVGMAKRQRRQKSAAVTIQRHARGYLARGRYRATQTIIRGFNRLMAARRARQFLRQALAAAHRMATEELLQSGCDAEITVGIAREEKRLAKLQKEIKAADAAVRRAVTKRLTGGWLTIRPAFRGGGELRREARAVQEEWKALEAAQ--IAAATTTAPGTTLANASVERDSKDXXXXXXXLGGTLPKTVFPGLLLRKGKPKDITRAARPDGGXXXXXXXXXXRPTTEAEKKAAPASGGVRGGRTGGAQAPAKACVPPSSRGGTAEAEREAWRRILAREKLLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYLAHWDAGAAAAAARKLLVRDDPDALLSRPSSPPFSGTPQRQDRGCQKSPLRPTMPTDDQQSVAPSIGSITGSTSTVAWQQQQLRAPAEQQQLRHGFPAAEEAEAEAEAGHSERGGKGIASFHLVVADKADIRRGXXXXXXXXXXXSEIANHEEAGAGFDLVSAYVTRVWGHGQAYNTLLFIDAVDAWRRCCPVADPAFAEGAAELRREFLCPGAPREASLPAETRRDLMRTLDTLPDDVLDGTAGGWDDGDESGDDDAGGGEEVGGDGRAPDAELPFADEKRPRETRVDLDLSDGDEGGRRSIRTAGNAATRDISGGSGGPRAIAKSKAQTKFSRNKIARPSATLQPQQQRRPVSAPGGAXXXXXXXXXXXXXXXXXXXXXXXXARNPHGLRPTSFDEAQFQALAHLSRVVGPGFWASDLGRLAASLHQQELKRRREAAREIVRLERRGRLANEAA------------------------------EALLRSAVAGAEVLETQELEVAREEDMVAEAATVEAVW 1165

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1550.4103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L2U9_9PHAE	0.000e+0	83.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGM7_ECTSI	0.000e+0	81.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1550	contig	Ecto-sp13_S_contig1550:11523..16459 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	2895
Hectar predicted targeting category	other localisation
Exons	6
Cds size	2895

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1550.4103.1	prot_Ecto-sp13_S_contig1550.4103.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1550 11523..16459 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462822.8021193-CDS-Ecto-sp13_S_contig1550:11522..11695	1681462822.8021193-CDS-Ecto-sp13_S_contig1550:11522..11695	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1550 11523..11695 +
1681462822.8135605-CDS-Ecto-sp13_S_contig1550:11882..12051	1681462822.8135605-CDS-Ecto-sp13_S_contig1550:11882..12051	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1550 11883..12051 +
1681462822.8250985-CDS-Ecto-sp13_S_contig1550:12601..12760	1681462822.8250985-CDS-Ecto-sp13_S_contig1550:12601..12760	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1550 12602..12760 +
1681462822.8348784-CDS-Ecto-sp13_S_contig1550:13091..13231	1681462822.8348784-CDS-Ecto-sp13_S_contig1550:13091..13231	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1550 13092..13231 +
1681462822.8451338-CDS-Ecto-sp13_S_contig1550:13622..15639	1681462822.8451338-CDS-Ecto-sp13_S_contig1550:13622..15639	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1550 13623..15639 +
1681462822.8563192-CDS-Ecto-sp13_S_contig1550:16222..16459	1681462822.8563192-CDS-Ecto-sp13_S_contig1550:16222..16459	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1550 16223..16459 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1550:11523..16459+
coding sequence from alignment at Ecto-sp13_S_contig1550:11523..16459+

protein sequence of mRNA_Ecto-sp13_S_contig1550.4103.1

>prot_Ecto-sp13_S_contig1550.4103.1 ID=prot_Ecto-sp13_S_contig1550.4103.1|Name=mRNA_Ecto-sp13_S_contig1550.4103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=965bp
MVTQDRKRKGCVGFQSLWRGYRVRKRWHPVIRLRVRHGRRSIIRPCFSSW
ARLARVQSWARRRFEEIEGRWERSCFHAWAEWTANLAAERQRKLERAGRT
LRNIAAYRSFRSWKSYTRTTRQAHRLYARAVGGTSMAAWVQYVGMAKRQR
GQKSAAVTIQRHARGYLARCRYRATQTIIHGFNRLMAARRARQFLRQALA
AAHRMATEELLQSGCDAEITAGIAREERRLAKLQKEIKAADAAVRRAVTK
RLTGGWLTIRPASRGGGELRREARAVQEEWKALEVAQTAVAAATATVPGT
TPANASVERDSKDGGGGGGGLGGTWPKTVFPGLLLRKGKPKDMISDARPN
GGGDGGGGGSNSRPKAAPAGRGARGGRTGGAQAPAKAAVPPSSRGATAEA
EREAWRRILARDRRLAREIIVHDFDVRNPPPLTCCAPGCGRTFTQDEHYL
AHWDVAGAADAARKLLLRDDPNAFLSRPSSPPFFETPQRQDRGCQKSPSR
PTMPTDDQQSVAPSTGSTSGSTSTVAGRQQELRAPADQQQLRHGCPAAES
EAEAGHPERGGKGIASFHLVVADKADIRRGGGGGGGGGSDGADHEEAGAG
FDLVSAYVTRVWGHGQAYNTLLFVDAVDAWRRCYPVADPAFAEGAAELRR
EFLCPGAPREATLPAETRRDLMRTLDTLPDDVLDGTAGGRDDGDESGDDD
AGGGEEVGGDGRAPDAELPFADEKRRRETGADLSDGDEGGRRSASTAGNA
ATRDSSGGSGGPRATAKSKARTKFSRNKIVGPSATRQPPQQRRPVSALGG
AAPPPTASSAAAAAAAAAAAAVAAARNPHGLRPTSFDEAQFQALAHLSRV
VGPGFWASDLGRRAAALHQQELKRRREAAHEIVRLERRGRLANEAAEVRR
HLSRGRDVKMESLAQSALDVASGSVVEALLRNAVAGAEVLEIQEVSASRH
ASGLIGMLLLFSVW*

mRNA from alignment at Ecto-sp13_S_contig1550:11523..16459+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1550.4103.1 ID=mRNA_Ecto-sp13_S_contig1550.4103.1|Name=mRNA_Ecto-sp13_S_contig1550.4103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4937bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1550:11523..16459+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTTACCCAGGATCGCAAGCGGAAGGGCTGCGTCGGATTTCAGTCCCT
CTGGAGGGGCTACCGCGTGCGGAAGCGGTGGCACCCTGTCATCCGCTTAC
GCGTTCGCCACGGCCGCCGCTCCATCATTCGCCCCTGCTTCTCCTCCTGG
GCCCGGCTGGCGCGGGTACAATCGTAAGCGTTTACATTCACGAGGCCCCA
AAACCTTTAACCGTTCAGTTGTCGAGGGACGAGCCCAAGGGTAGTTGCGG
GGGGGAGAGGGGTCGGCGTCCATCGTTCGCCACAGACTTAATCCAAGTGG
ACAATTTACGCTCCTCGGGGGTGCTTGCTTTCTCTTTCCTCGATCTGCTG
CTTTTTCAAGCTGGGCGCGGCGACGGTTCGAGGAGATCGAGGGCCGTTGG
GAGCGGTCCTGCTTCCACGCCTGGGCGGAGTGGACGGCCAACCTGGCGGC
CGAGAGGCAGCGGAAGCTGGAGCGCGCCGGGAGGACCCTGAGAAACATCG
CCGCCTACCGGTCGTTCCGCTCCTGGAAGGTGTGTGGGCATATAGAACGC
TACACACAAGCCCACCCGACCGCTACGTGGCGGTGGAGTAGACCGAAAGC
TTGTGAATTGTTGTCTGGAGAGTGGAGACCGCACCCCTCTGTTTTTCTTT
CGCCGACGCGTTCTTCCCTGCCGACACGAGGAGGAGACCACCCTACGGCA
ATCGAGGTTTACACGGTGTCACTGTCGTGGAGCGTAGTTGTCGTGAGACT
TTCGAAGCTACGCTTGAGAAGCGCCACCACCGCCATTCCCTGGCCGGTCG
TTGCCCGTCCGGGGTGTAGCTTTCCTCGCTCGCACTTGACCCATTTCATG
CTGCAGGCGGTCCGTTCGGTCCGTGTAGCGGTGGCTCTGGTACGCCTAGG
CTTTGAAGTGTCGTTTCGCTGTTCACACCAGGTGCATCATGTCTGAAAAT
GTTGCCCCCCTTGGTCGCGGCAGAGACAAAAAGAGAGAAACGTCACCGTC
ACCGCCGTCACCGCTGTTGCTGCCGCCGCCGCCACTATTGCTTAGCTTTT
CCTTGCCGTTCTGGACCACATCCTGGCAGTCGTACACCAGGACAACACGC
CAGGCGCACCGCCTGTACGCCCGTGCCGTGGGGGGTACGTCGATGGCCGC
CTGGGTTCAGTACGTGGGCATGGCGAAGAGGCAGCGGGGGCAGAAGAGTG
CGGCCGTCACTATTCAGCGGCATGCGAGGGGCTACCTGGTGAGGGTTTCG
TGCTGGGAGTCTAGCTTATCCCACATCGTGATGGTGCCCTCTGTTGCTGC
GGCTGTCACTTATGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTG
TCGTTTCTTCGAAATCACTGCTGTAACGCGTACCTCTCGTTTGGCCAAAC
GCCGCATCGAAATGCGAAGAGACAGGACGGTCATAACAATCCCTTGTCAA
GCAAGTACATCAGATTGCGTTCAGTGCTGAAGAAGCTCTTGAAAACAATA
GCGTTCAAACCCTGTCCTGCTGCCCGCACGCACCTACGCACACGCCGCCG
CTGCGTGCTTCACTGGCAGGCGAGATGTCGATATCGGGCCACCCAGACGA
TAATCCACGGCTTCAACCGCCTCATGGCCGCGCGGCGAGCCCGACAGTTT
CTCCGCCAGGCGCTGGCCGCCGCCCACCGCATGGCAACAGAGGAGCTCCT
CCAATCCGGGTGCGCGCCTTGTGTAGAGAGAGCACCGGTGTGCGATTGAG
AAGAAGGGCCTCAATGCTTGTGCAGGATACCTGCAAGCCAAGACGCACCC
GTTCCCCATGCGAGTATAAAGATCTGAGGATGAAGGCATTTATTGCGAGG
AGCACGCGTGCGGCACTACTCCTCTGTTCTGACAGAACGCGGCGAAAGGG
TTGTGCCCGTGAGCGAACTGCCATAAAAGGTTTTCTTACAGTTCGACGAT
TTTATGTCGTCAAGAACCTAGGCACAGGGGTCACAAAGTCTCGCCATGTG
TCAAACAAAAGGCCCCGTCATCAGTAAATTGCGCTCCTAGGCCGTTCTCT
TCTCCTCGAACGAAAAACACGAAATAGTACAACGAACGTTGTCACCTCAG
GTGCGATGCCGAGATCACCGCCGGGATCGCGAGAGAAGAGAGACGCCTCG
CCAAGCTGCAGAAGGAGATCAAGGCCGCAGACGCGGCCGTCCGGCGGGCG
GTCACCAAGAGGCTGACCGGCGGCTGGCTGACGATCCGGCCCGCTTCCCG
CGGCGGGGGTGAGCTCCGGCGAGAGGCGAGGGCGGTTCAGGAGGAGTGGA
AGGCGCTAGAAGTCGCCCAGACTGCTGTCGCTGCTGCAACGGCCACCGTC
CCAGGAACGACTCCGGCGAATGCCTCGGTGGAAAGGGATTCCAAAGACGG
CGGTGGGGGCGGTGGTGGGCTGGGCGGAACGTGGCCGAAAACTGTCTTCC
CGGGACTTCTACTGAGGAAGGGGAAGCCGAAAGACATGATAAGTGACGCG
CGGCCTAACGGTGGTGGTGATGGTGGCGGCGGCGGTAGCAACAGCCGTCC
GAAAGCGGCTCCTGCCGGTAGAGGAGCGAGAGGGGGACGAACGGGAGGAG
CGCAAGCCCCTGCCAAGGCCGCCGTCCCTCCTTCTTCTCGCGGAGCAACG
GCGGAGGCAGAACGGGAGGCCTGGCGGAGGATCCTGGCCAGGGACAGGCG
CCTCGCGAGAGAAATCATCGTGCATGACTTCGACGTGCGCAACCCGCCCC
CGCTTACTTGCTGCGCGCCGGGCTGCGGCCGCACCTTCACCCAGGACGAG
CACTACCTGGCCCACTGGGACGTCGCTGGTGCCGCCGACGCCGCGAGGAA
GTTGCTGCTACGAGACGATCCCAACGCTTTCTTGTCTCGTCCGTCCTCGC
CACCCTTTTTCGAGACTCCGCAGCGGCAAGACCGCGGCTGCCAGAAATCG
CCATCGAGGCCGACCATGCCGACAGACGACCAGCAGTCCGTAGCGCCGTC
CACCGGTAGTACCTCGGGTTCGACATCAACGGTTGCCGGGCGGCAGCAGG
AGCTCCGCGCCCCAGCGGATCAACAGCAGCTCCGCCACGGCTGTCCTGCA
GCGGAATCGGAAGCGGAAGCCGGGCACCCGGAGCGGGGGGGGAAAGGAAT
AGCGTCGTTTCACCTGGTCGTCGCCGACAAGGCCGACATCAGAAGGGGCG
GTGGAGGCGGCGGCGGCGGCGGTTCGGATGGAGCGGACCACGAAGAAGCC
GGCGCCGGGTTCGACCTCGTCTCGGCGTACGTCACCCGGGTCTGGGGCCA
CGGGCAGGCGTACAACACCCTCCTCTTCGTCGACGCGGTGGACGCCTGGC
GCCGTTGCTATCCCGTCGCGGACCCGGCCTTTGCAGAGGGCGCGGCCGAG
CTGCGGCGGGAGTTCCTGTGCCCGGGGGCGCCCCGGGAGGCCACCCTTCC
GGCGGAGACACGGCGAGACCTCATGCGCACACTGGACACCCTGCCCGACG
ACGTCCTCGACGGCACGGCGGGAGGGCGGGACGATGGTGATGAGAGTGGC
GACGATGACGCCGGGGGTGGTGAAGAAGTCGGTGGTGACGGGCGGGCGCC
CGATGCGGAGCTGCCCTTCGCGGATGAAAAACGTCGGCGGGAGACAGGAG
CCGACCTCAGCGACGGAGATGAAGGCGGCAGAAGAAGTGCCAGCACGGCC
GGCAACGCTGCGACCCGCGACAGCAGCGGTGGCAGTGGTGGCCCAAGAGC
GACCGCAAAGAGCAAGGCCCGGACCAAATTCTCTCGCAATAAGATCGTGG
GGCCGTCGGCGACGCGTCAGCCGCCCCAGCAACGCAGACCGGTGTCGGCT
CTGGGGGGGGCGGCACCACCACCAACAGCCTCTTCCGCCGCCGCCGCCGC
TGCAGCAGCAGCAGCGGCGGCGGTGGCAGCAGCGAGGAACCCGCACGGTC
TGCGGCCTACCTCGTTCGACGAGGCGCAGTTTCAGGCTCTAGCGCACCTG
TCTCGGGTGGTCGGGCCCGGGTTCTGGGCGTCCGACCTTGGTCGGCGCGC
CGCCGCGCTGCACCAACAGGAGCTCAAGAGGAGACGGGAGGCCGCTCACG
AGATCGTGCGGCTGGAGGTGCGTGCGCGCATGGCATGTGTAGATAGAGGA
AAGCTTCTCCTTCGTGTTGTTCTGTTACTCGGTGGCCGTCGGGGTAGGTA
TTTATTGTGGGTGGGTGTGTTGGTGGGTTGGCCTCTCCTCGTAGCTACAC
GTGCACGGCTTCGGCGTCGGGAGGGGGCACGCCGCTGGCGTTGTTGTTGC
TGTTGGTTGTGATGCTGCGGTGGTCGTCCTCGACATACTGCCGTAGCTGA
CACTTCGAGGGGGTCTCTACAACACACGACAGCAGTTGTGTTTCTTTCTT
TAGCATGGCGCCGTCTCTCGAGTCCCGCCGGGTACACGAGCGGGCCTCGT
CTCGTCTTTTGCCCGCACGGCCCGGCTCGGGTGTTGAAGAATGCCGGCGC
TTCTCTCTGTGCGAGTGCGTACACGACCCGGTAACTTTGCGTTGGTTTCT
GTGTCTCAAGCACGTGTAGTAGCAGGCTTTCACCATGTCTGCCCTCGCAC
AGAGTTCTTGGTGATCCCAACACCTCGTTTGTTTTGGCCTCGCGACTGTG
CTCCCCATCCCGTCCCCCAAATGTCCCCCGCCCCCCGGCGGCGCATCCAG
CGGAGGGGTCGTCTAGCCAACGAGGCGGCAGAGGTAAGGAGACACTTGTC
GCGCGGCCGGGACGTGAAGATGGAGTCCCTCGCCCAGTCCGCCTTGGACG
TCGCCTCCGGCTCGGTTGTCGAGGCTCTCCTCCGTAACGCGGTCGCTGGG
GCGGAGGTTTTGGAGATACAAGAGGTGAGCGCGTCGCGGCACGCCAGCGG
CCTTATAGGAATGTTGTTGTTGTTTTCCGTGTGGTGA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1550:11523..16459+

>mRNA_Ecto-sp13_S_contig1550.4103.1 ID=mRNA_Ecto-sp13_S_contig1550.4103.1|Name=mRNA_Ecto-sp13_S_contig1550.4103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2895bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1550:11523..16459+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTTACCCAGGATCGCAAGCGGAAGGGCTGCGTCGGATTTCAGTCCCT
CTGGAGGGGCTACCGCGTGCGGAAGCGGTGGCACCCTGTCATCCGCTTAC
GCGTTCGCCACGGCCGCCGCTCCATCATTCGCCCCTGCTTCTCCTCCTGG
GCCCGGCTGGCGCGGGTACAATCCTGGGCGCGGCGACGGTTCGAGGAGAT
CGAGGGCCGTTGGGAGCGGTCCTGCTTCCACGCCTGGGCGGAGTGGACGG
CCAACCTGGCGGCCGAGAGGCAGCGGAAGCTGGAGCGCGCCGGGAGGACC
CTGAGAAACATCGCCGCCTACCGGTCGTTCCGCTCCTGGAAGTCGTACAC
CAGGACAACACGCCAGGCGCACCGCCTGTACGCCCGTGCCGTGGGGGGTA
CGTCGATGGCCGCCTGGGTTCAGTACGTGGGCATGGCGAAGAGGCAGCGG
GGGCAGAAGAGTGCGGCCGTCACTATTCAGCGGCATGCGAGGGGCTACCT
GGCGAGATGTCGATATCGGGCCACCCAGACGATAATCCACGGCTTCAACC
GCCTCATGGCCGCGCGGCGAGCCCGACAGTTTCTCCGCCAGGCGCTGGCC
GCCGCCCACCGCATGGCAACAGAGGAGCTCCTCCAATCCGGGTGCGATGC
CGAGATCACCGCCGGGATCGCGAGAGAAGAGAGACGCCTCGCCAAGCTGC
AGAAGGAGATCAAGGCCGCAGACGCGGCCGTCCGGCGGGCGGTCACCAAG
AGGCTGACCGGCGGCTGGCTGACGATCCGGCCCGCTTCCCGCGGCGGGGG
TGAGCTCCGGCGAGAGGCGAGGGCGGTTCAGGAGGAGTGGAAGGCGCTAG
AAGTCGCCCAGACTGCTGTCGCTGCTGCAACGGCCACCGTCCCAGGAACG
ACTCCGGCGAATGCCTCGGTGGAAAGGGATTCCAAAGACGGCGGTGGGGG
CGGTGGTGGGCTGGGCGGAACGTGGCCGAAAACTGTCTTCCCGGGACTTC
TACTGAGGAAGGGGAAGCCGAAAGACATGATAAGTGACGCGCGGCCTAAC
GGTGGTGGTGATGGTGGCGGCGGCGGTAGCAACAGCCGTCCGAAAGCGGC
TCCTGCCGGTAGAGGAGCGAGAGGGGGACGAACGGGAGGAGCGCAAGCCC
CTGCCAAGGCCGCCGTCCCTCCTTCTTCTCGCGGAGCAACGGCGGAGGCA
GAACGGGAGGCCTGGCGGAGGATCCTGGCCAGGGACAGGCGCCTCGCGAG
AGAAATCATCGTGCATGACTTCGACGTGCGCAACCCGCCCCCGCTTACTT
GCTGCGCGCCGGGCTGCGGCCGCACCTTCACCCAGGACGAGCACTACCTG
GCCCACTGGGACGTCGCTGGTGCCGCCGACGCCGCGAGGAAGTTGCTGCT
ACGAGACGATCCCAACGCTTTCTTGTCTCGTCCGTCCTCGCCACCCTTTT
TCGAGACTCCGCAGCGGCAAGACCGCGGCTGCCAGAAATCGCCATCGAGG
CCGACCATGCCGACAGACGACCAGCAGTCCGTAGCGCCGTCCACCGGTAG
TACCTCGGGTTCGACATCAACGGTTGCCGGGCGGCAGCAGGAGCTCCGCG
CCCCAGCGGATCAACAGCAGCTCCGCCACGGCTGTCCTGCAGCGGAATCG
GAAGCGGAAGCCGGGCACCCGGAGCGGGGGGGGAAAGGAATAGCGTCGTT
TCACCTGGTCGTCGCCGACAAGGCCGACATCAGAAGGGGCGGTGGAGGCG
GCGGCGGCGGCGGTTCGGATGGAGCGGACCACGAAGAAGCCGGCGCCGGG
TTCGACCTCGTCTCGGCGTACGTCACCCGGGTCTGGGGCCACGGGCAGGC
GTACAACACCCTCCTCTTCGTCGACGCGGTGGACGCCTGGCGCCGTTGCT
ATCCCGTCGCGGACCCGGCCTTTGCAGAGGGCGCGGCCGAGCTGCGGCGG
GAGTTCCTGTGCCCGGGGGCGCCCCGGGAGGCCACCCTTCCGGCGGAGAC
ACGGCGAGACCTCATGCGCACACTGGACACCCTGCCCGACGACGTCCTCG
ACGGCACGGCGGGAGGGCGGGACGATGGTGATGAGAGTGGCGACGATGAC
GCCGGGGGTGGTGAAGAAGTCGGTGGTGACGGGCGGGCGCCCGATGCGGA
GCTGCCCTTCGCGGATGAAAAACGTCGGCGGGAGACAGGAGCCGACCTCA
GCGACGGAGATGAAGGCGGCAGAAGAAGTGCCAGCACGGCCGGCAACGCT
GCGACCCGCGACAGCAGCGGTGGCAGTGGTGGCCCAAGAGCGACCGCAAA
GAGCAAGGCCCGGACCAAATTCTCTCGCAATAAGATCGTGGGGCCGTCGG
CGACGCGTCAGCCGCCCCAGCAACGCAGACCGGTGTCGGCTCTGGGGGGG
GCGGCACCACCACCAACAGCCTCTTCCGCCGCCGCCGCCGCTGCAGCAGC
AGCAGCGGCGGCGGTGGCAGCAGCGAGGAACCCGCACGGTCTGCGGCCTA
CCTCGTTCGACGAGGCGCAGTTTCAGGCTCTAGCGCACCTGTCTCGGGTG
GTCGGGCCCGGGTTCTGGGCGTCCGACCTTGGTCGGCGCGCCGCCGCGCT
GCACCAACAGGAGCTCAAGAGGAGACGGGAGGCCGCTCACGAGATCGTGC
GGCTGGAGCGGAGGGGTCGTCTAGCCAACGAGGCGGCAGAGGTAAGGAGA
CACTTGTCGCGCGGCCGGGACGTGAAGATGGAGTCCCTCGCCCAGTCCGC
CTTGGACGTCGCCTCCGGCTCGGTTGTCGAGGCTCTCCTCCGTAACGCGG
TCGCTGGGGCGGAGGTTTTGGAGATACAAGAGGTGAGCGCGTCGCGGCAC
GCCAGCGGCCTTATAGGAATGTTGTTGTTGTTTTCCGTGTGGTGA