prot_Ecto-sp13_S_contig1550.4102.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1550.4102.1
Unique Name	prot_Ecto-sp13_S_contig1550.4102.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	472

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1550.4102.1 vs. uniprot
Match: A0A6H5L2U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U9_9PHAE)

HSP 1 Score: 757 bits (1955), Expect = 6.770e-258
Identity = 401/454 (88.33%), Postives = 409/454 (90.09%), Query Frame = 0

Query:    1 MTAAGDFPSLASPSRWQGGGCSSPGVKRRYNNTRSNRARCRQSSSATGIR---NPRALFPVSDDFIRSAWVRRDRTQRAQEYEELFPYFSRRSSTAPFLNDRTTASQTAAAGTPAARPAAHETQGGRLSPDRHQRGPGASSTKDLPTAGEAATTPISRGCARSRRHMGVRTGSGNVAELRRAFRRLEPENMFRAPWVDGEPIWAYWGDGKGGGGEGGHAHGDPQPPLPPGRRASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGEVSAHRPLELTRMAVHDACGSEMADALREYRAWTARSRSRGDGGREKRSSSTAPCSAPTRGNRSTVMSAGGCGKRSRATASQARVAELQRTPTGWRTLRWVMMKRQAELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPLDAQAFRACSRPGRKLFLEIEAPAR 451
            MTAAGDFPSL SPSRWQGGGCSSPGVKR YNNTRSNRARC  SSSATGI    NPRALFPV DDFIRSAWVRRDRTQRAQEYEEL+P F RRSST P LNDRTTASQTAAAGTPA RPAA ETQ GRL+PDRHQRGPGA  TKDL TAGEAATTPISRGCARSRRHMGV TGSGN+AELRRAFRRLEPENMFRAP VDGEPIWAYWGDGK               PLPPG+RASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGEVSAHRPLELTRMAVHDACGSEMA+ALREYRAWTARSRSRGDGGREKR SSTAP SA TRGNRSTVMS GGCGK SRA ASQARVAELQRTP GWR+LRWVMMKRQAELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPL+A  FRACSRPGRKLFL+IEAPAR
Sbjct:    3 MTAAGDFPSLVSPSRWQGGGCSSPGVKRPYNNTRSNRARCSHSSSATGIMWVANPRALFPVRDDFIRSAWVRRDRTQRAQEYEELYPCFFRRSSTGPLLNDRTTASQTAAAGTPATRPAARETQAGRLAPDRHQRGPGAPYTKDLATAGEAATTPISRGCARSRRHMGVGTGSGNIAELRRAFRRLEPENMFRAPRVDGEPIWAYWGDGKXXXXXXXXXXXXXXXPLPPGKRASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGEVSAHRPLELTRMAVHDACGSEMANALREYRAWTARSRSRGDGGREKRGSSTAPRSALTRGNRSTVMSTGGCGKHSRAAASQARVAELQRTPAGWRSLRWVMMKRQAELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPLEAHVFRACSRPGRKLFLDIEAPAR 456

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BLAST of mRNA_Ecto-sp13_S_contig1550.4102.1 vs. uniprot
Match: D8LGM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM7_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 1.180e-101
Identity = 190/305 (62.30%), Postives = 192/305 (62.95%), Query Frame = 0

Query:  164 MGVRTGSGNVAELRRAFRRLEPENMFRAPWVDGEPIWAYWGDGKGGGGEGGHAHGDPQPPLPPGRRASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGEVSAHRPLELTRMAVHDACGSEMADALREYRAWTARSRSRGDGGREKRSSSTAPCSAPTRGNRSTVMSAGGCGKRSRATASQARVAELQRTPTGWRTLRWVMMKRQAELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPLDAQAFRACSRPGRKLFLEIEAPARVIMRMWMTCWPFRKARN 468
            MGV TGSGNVAELRRAFRRLEPENMFRAP VDGEPIWAYWGDGKGG GEGGHAHG PQPPLPPG+RASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGE                                                                                                         AELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPL+AQAFRACSRPGRKLFLEIEAPARVIMRMW T WPFRK R 
Sbjct:    1 MGVGTGSGNVAELRRAFRRLEPENMFRAPRVDGEPIWAYWGDGKGGRGEGGHAHGQPQPPLPPGKRASTKDGFVLVPAKELTELRAIEGVLRKERGVLNAHCLVEFNEGE---------------------------------------------------------------------------------------------------------AELKSQAMEAAAMFAEEREQRLKERFLEAWERRHDYDLYCVLAGQFWPLEAQAFRACSRPGRKLFLEIEAPARVIMRMWRTYWPFRKDRK 200

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1550.4102.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1550.4102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L2U9_9PHAE	6.770e-258	88.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGM7_ECTSI	1.180e-101	62.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 376..403

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1550	contig	Ecto-sp13_S_contig1550:7805..11003 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1550.4102.1	mRNA_Ecto-sp13_S_contig1550.4102.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1550 7805..11003 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1550.4102.1 ID=prot_Ecto-sp13_S_contig1550.4102.1|Name=mRNA_Ecto-sp13_S_contig1550.4102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=472bp
MTAAGDFPSLASPSRWQGGGCSSPGVKRRYNNTRSNRARCRQSSSATGIR
NPRALFPVSDDFIRSAWVRRDRTQRAQEYEELFPYFSRRSSTAPFLNDRT
TASQTAAAGTPAARPAAHETQGGRLSPDRHQRGPGASSTKDLPTAGEAAT
TPISRGCARSRRHMGVRTGSGNVAELRRAFRRLEPENMFRAPWVDGEPIW
AYWGDGKGGGGEGGHAHGDPQPPLPPGRRASTKDGFVLVPAKELTELRAI
EGVLRKERGVLNAHCLVEFNEGEVSAHRPLELTRMAVHDACGSEMADALR
EYRAWTARSRSRGDGGREKRSSSTAPCSAPTRGNRSTVMSAGGCGKRSRA
TASQARVAELQRTPTGWRTLRWVMMKRQAELKSQAMEAAAMFAEEREQRL
KERFLEAWERRHDYDLYCVLAGQFWPLDAQAFRACSRPGRKLFLEIEAPA
RVIMRMWMTCWPFRKARNGRH*