prot_Ecto-sp13_S_contig1549.4098.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1549.4098.1
Unique Nameprot_Ecto-sp13_S_contig1549.4098.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp13_S_contig1549.4098.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.210e-41
Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0
Query:    1 LTDEEALELITASPPQGGRGGGRKARHRGGNQWHEAKEGDADVMALGSDDEGADDDDDLEESHVPGEELFNRCINRTLEAQE 82
            LTDEEALELITASPPQGGRG GRKARHRGGNQWHEAKEGDADVMALGSDDEGA+DDDDLE ++VPGEELFNRCINRTLEAQE
Sbjct: 1170 LTDEEALELITASPPQGGRGRGRKARHRGGNQWHEAKEGDADVMALGSDDEGANDDDDLEGNYVPGEELFNRCINRTLEAQE 1251          
BLAST of mRNA_Ecto-sp13_S_contig1549.4098.1 vs. uniprot
Match: A0A6H5KUR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR3_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.970e-21
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0
Query:   32 QWHEAKEGDADVMALGSDDEGADDDDDLEESHVPGEELFNRCINRTLEAQE 82
            QWHEAKEGDADVMALGSDDEGADDDD LE S+VPGEELFNRCINRTLEAQE
Sbjct:  118 QWHEAKEGDADVMALGSDDEGADDDD-LEGSYVPGEELFNRCINRTLEAQE 167          
BLAST of mRNA_Ecto-sp13_S_contig1549.4098.1 vs. uniprot
Match: F0XY87_AURAN (Intraflagellar transport protein 122 homolog n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY87_AURAN)

HSP 1 Score: 70.1 bits (170), Expect = 3.440e-12
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    1 LTDEEALELITASPPQGGRGGGRKARHRGGNQWHEAKEGDADVMALGSDDEGADDDDDLEESHVPGEELFNRCINRTLEAQE 82
            L D+EALELI  +PP+ GR   RK R     QW+E+KEG+A+VM++G DD+  DDDD         E+LFN+CI+RTL  QE
Sbjct: 1116 LGDDEALELIREAPPETGRDR-RKLR----GQWNESKEGEANVMSMGGDDDAYDDDD--------AEDLFNKCIHRTLSNQE 1184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1549.4098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXW9_ECTSI1.210e-4193.90Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A6H5KUR3_9PHAE2.970e-2194.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0XY87_AURAN3.440e-1251.22Intraflagellar transport protein 122 homolog n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1549contigEcto-sp13_S_contig1549:15354..16096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1549.4098.1mRNA_Ecto-sp13_S_contig1549.4098.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1549 15353..16096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1549.4098.1 ID=prot_Ecto-sp13_S_contig1549.4098.1|Name=mRNA_Ecto-sp13_S_contig1549.4098.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
LTDEEALELITASPPQGGRGGGRKARHRGGNQWHEAKEGDADVMALGSDD
EGADDDDDLEESHVPGEELFNRCINRTLEAQE
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