mRNA_Ecto-sp13_S_contig1548.4091.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: D8LRB7_ECTSI (Similar to calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB7_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.500e-16 Identity = 43/70 (61.43%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 160 QNTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMDA 369
+NTRAEF MVATGFGLTNQELKE FGFFD DGSGKVDM EFLDYMMDA
Sbjct: 134 KNTRAEFXXXXXXXXXXXXXXXXXXXXXXXMVATGFGLTNQELKEIFGFFDSDGSGKVDMAEFLDYMMDA 203
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A6H5JR81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR81_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.180e-14 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1
Query: 253 VATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMDA 369
VA+GFGLTN+ELKE FGFFDRDGSGKVDM EFLDYMMDA
Sbjct: 162 VASGFGLTNRELKEIFGFFDRDGSGKVDMAEFLDYMMDA 200
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A267FZ02_9PLAT (Uncharacterized protein (Fragment) n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FZ02_9PLAT) HSP 1 Score: 59.7 bits (143), Expect = 6.770e-8 Identity = 38/126 (30.16%), Postives = 63/126 (50.00%), Query Frame = 1
Query: 1 GAPGTKRSCRPVSSTTTILLRAGRRHNPRALRR---SHYFRLSPAASPWVPNTCEQQ--NTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMM 363
G G+K R ++ + GR + RALR+ H R + C Q+ TR E DAF A+D N DG + + E +++ + G +T E +E +D++G GK+D EF+D+++
Sbjct: 48 GRDGSKGRLRTFDEFAALVQQTGRNPSQRALRQYWDRHNSRRTGVDLQSFLEVCRQEPVTTRDELLDAFHAVDLNSDGYLSLDEFVQMLSSGGEPITKLEARELLQQYDKNGDGKLDYEEFIDFVL 173
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: UPI001E1E08FC (calmodulin-2/4-like isoform X3 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E08FC) HSP 1 Score: 53.9 bits (128), Expect = 2.530e-6 Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 169 RAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMDA 369
R E +DAFR D G+++ TEL R++ G LT+++ KE D++G GKV+M +F+D++ +
Sbjct: 89 REELKDAFRIFDRTGKGEINKTELERVLKKYGEPLTHRQSKELIELMDKNGDGKVNMDDFVDFLCEV 155
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: UPI000DC838C1 (Uncharacterized protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=UPI000DC838C1) HSP 1 Score: 52.4 bits (124), Expect = 3.210e-6 Identity = 26/72 (36.11%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 151 CEQQNT-RAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMM 363
C+ QN E + F IDH+KDGK+ I++L+ G L+ QEL+E D++G +D+ EF++ M+
Sbjct: 39 CDGQNPPHKELKKGFSMIDHDKDGKITISDLSAASKMAGIHLSRQELEEMMAEADQNGDHAIDISEFIEIML 110
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A7S2CDS1_9DINO (Calmodulin (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CDS1_9DINO) HSP 1 Score: 53.9 bits (128), Expect = 4.090e-6 Identity = 28/84 (33.33%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 115 LSPAASPWVPNTCEQQNTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMD 366
L PA P P + + + F+ +D NKDG + E+ RL+ ++++ELK FG DR+G+G+V+ EF+D++ D
Sbjct: 14 LRPALEPMPPADA----SIGKIKKKFKKLDGNKDGSLSFAEMKRLLQKGRDDISDRELKILFGQVDRNGNGRVEFSEFVDFVFD 93
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A7T798_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7T798_NEMVE) HSP 1 Score: 52.4 bits (124), Expect = 6.820e-6 Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 175 EFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYM 360
EF++AF + D N DG++D EL +M + G ++ELK D+DGSG +D+ EF++ M
Sbjct: 16 EFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELM 77
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A6P4NLX4_GOSAR (probable calcium-binding protein CML45 n=9 Tax=Gossypium TaxID=3633 RepID=A0A6P4NLX4_GOSAR) HSP 1 Score: 51.6 bits (122), Expect = 7.410e-6 Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 1
Query: 175 EFEDAFRAIDHNKDGKVDITELNRLMVATGFG---LTNQELKEFFGFFDRDGSGKVDMVEFLDYM 360
E ++AF D NKDG +D TEL R+++ G +T +E K D DG G+VD EFL +M
Sbjct: 54 EIKEAFDVFDDNKDGFIDATELQRVLICLGVKGKMVTVEECKRMIRVADEDGDGRVDFNEFLKFM 118
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: UPI00138FC30A (calmodulin n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC30A) HSP 1 Score: 52.4 bits (124), Expect = 7.580e-6 Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 175 EFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYM 360
EF++AF + D N DG++D EL +M + G ++ELK D+DGSG +D+ EF++ M
Sbjct: 28 EFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELM 89
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A1U8M7T1_GOSHI (probable calcium-binding protein CML45 n=14 Tax=Gossypium TaxID=3633 RepID=A0A1U8M7T1_GOSHI) HSP 1 Score: 51.6 bits (122), Expect = 1.290e-5 Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 1
Query: 175 EFEDAFRAIDHNKDGKVDITELNRLMVATGFG---LTNQELKEFFGFFDRDGSGKVDMVEFLDYM 360
E ++AF D NKDG +D TEL R+++ G +T +E K D DG G+VD EFL +M
Sbjct: 86 EIKEAFDVFDDNKDGFIDATELQRVLICLGVRGKMVTVEECKRMIRVADEDGDGRVDFNEFLKFM 150 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1548.4091.1 >prot_Ecto-sp13_S_contig1548.4091.1 ID=prot_Ecto-sp13_S_contig1548.4091.1|Name=mRNA_Ecto-sp13_S_contig1548.4091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp GAPGTKRSCRPVSSTTTILLRAGRRHNPRALRRSHYFRLSPAASPWVPNTback to top mRNA from alignment at Ecto-sp13_S_contig1548:16015..16386- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1548.4091.1 ID=mRNA_Ecto-sp13_S_contig1548.4091.1|Name=mRNA_Ecto-sp13_S_contig1548.4091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1548:16015..16386- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1548:16015..16386- >mRNA_Ecto-sp13_S_contig1548.4091.1 ID=mRNA_Ecto-sp13_S_contig1548.4091.1|Name=mRNA_Ecto-sp13_S_contig1548.4091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1548:16015..16386- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |