prot_Ecto-sp13_S_contig15476.4088.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15476.4088.1
Unique Nameprot_Ecto-sp13_S_contig15476.4088.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15476.4088.1 vs. uniprot
Match: D7FYA0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA0_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.520e-34
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0 
Query:    1 MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSHLVEWGSVPPSPAVAVAGA 65
            MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMS LVEWGSV PSPAVAVAGA
Sbjct:  383 MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSQLVEWGSVRPSPAVAVAGA 447
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BLAST of mRNA_Ecto-sp13_S_contig15476.4088.1 vs. uniprot
Match: A0A6H5JGT6_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT6_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.720e-33
Identity = 62/65 (95.38%), Postives = 62/65 (95.38%), Query Frame = 0 
Query:    1 MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSHLVEWGSVPPSPAVAVAGA 65
            MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMS LVEWGSV PSPAVAV GA
Sbjct:  351 MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSQLVEWGSVRPSPAVAVDGA 415
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BLAST of mRNA_Ecto-sp13_S_contig15476.4088.1 vs. uniprot
Match: W7TSI8_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSI8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.880e-10
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:    1 MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSHLVEWGSVPPSPA 59
            +DHH  +T++F+ MY DV+YGL+DV +D   LRS+PY   +E TM  LV+W +  P+PA
Sbjct:  402 LDHHRSLTSVFRAMYSDVKYGLSDVTRDLSCLRSQPYYQNLETTMQALVDWAA--PAPA 458
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15476.4088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYA0_ECTSI3.520e-3496.92JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JGT6_9PHAE1.720e-3395.38Bifunctional lysine-specific demethylase and histi... [more]
W7TSI8_9STRA1.880e-1049.15Bifunctional lysine-specific demethylase and histi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15476contigEcto-sp13_S_contig15476:1469..2774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15476.4088.1mRNA_Ecto-sp13_S_contig15476.4088.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15476 1425..3358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15476.4088.1 ID=prot_Ecto-sp13_S_contig15476.4088.1|Name=mRNA_Ecto-sp13_S_contig15476.4088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
MDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSHLVE
WGSVPPSPAVAVAGAAAGGGPAAAAATRAPSSGFGGAAVASPKKGAGAKK
KKSKKK*
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