prot_Ecto-sp13_S_contig15472.4086.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15472.4086.1
Unique Nameprot_Ecto-sp13_S_contig15472.4086.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Match: D8LMP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMP3_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.610e-30
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:    1 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEH 58
            RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEH
Sbjct:   86 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEH 143
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BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Match: A0A382Q2U4_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382Q2U4_9ZZZZ)

HSP 1 Score: 53.1 bits (126), Expect = 6.800e-6
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:    1 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKT 54
            RG++E+V++ IA G DL  M  +  T LH A  G   +VA+LLI KGA+LNAK+
Sbjct:   36 RGNIEAVKQAIADGADLNAMGDEGETPLHQAALGGHKEVAELLIVKGADLNAKS 89
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BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Match: A0A097EQD2_9GAMM (Glutaminase n=1 Tax=Francisella sp. FSC1006 TaxID=1547445 RepID=A0A097EQD2_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 1.100e-5
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0 
Query:    2 GDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTR 55
            GD+  +++ +A G D+ + D+DN TALH+A A     V + LI KGAN+NA  R
Sbjct:  435 GDISEIKRAVALGVDINKGDYDNRTALHLAAAEGHDDVVKYLIRKGANINATDR 488
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BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Match: A0A432FEB4_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A432FEB4_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-5
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:    1 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKT 54
            RG++E+V++ IA G D+  M  +  T LH A  G   +VA+LLI KGA+LNAK+
Sbjct:   36 RGNIEAVKQAIADGADVNTMGDEGETPLHQAALGGHKKVAELLIAKGADLNAKS 89
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BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Match: A0A103Y1S0_CYNCS (Ankyrin repeat-containing protein n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y1S0_CYNCS)

HSP 1 Score: 53.1 bits (126), Expect = 4.840e-5
Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:    2 GDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTR 55
            GDLE +++ + +G D+   D DN TALH+A    FS VA+LL+ +GA ++ + R
Sbjct:   53 GDLEGIKELLTSGTDVNFKDIDNRTALHVAACQGFSNVAELLLERGAEVDPRDR 106
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BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Match: M1VJX3_CYAM1 (Similar to Raf/ATN-like protein kinase, with ankyrin repeats n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VJX3_CYAM1)

HSP 1 Score: 53.1 bits (126), Expect = 5.810e-5
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:    1 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTR 55
            RGD+ +V+ +I  G D+ + D+D  TALH+A A  +++VA+LL+  GA++ A  R
Sbjct: 1201 RGDIAAVRSFIGEGVDVRQADYDRRTALHLAAAEGYTEVAKLLVEAGADVMATDR 1255
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15472.4086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMP3_ECTSI3.610e-30100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A382Q2U4_9ZZZZ6.800e-650.00Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A097EQD2_9GAMM1.100e-544.44Glutaminase n=1 Tax=Francisella sp. FSC1006 TaxID=... [more]
A0A432FEB4_9BACT1.630e-548.15Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A103Y1S0_CYNCS4.840e-542.59Ankyrin repeat-containing protein n=2 Tax=Cynara c... [more]
M1VJX3_CYAM15.810e-541.82Similar to Raf/ATN-like protein kinase, with ankyr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 57..72
score: 37.65
coord: 138..152
score: 38.2
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 23..52
e-value: 5.8E-4
score: 29.2
coord: 56..85
e-value: 2.0E-4
score: 30.7
coord: 89..118
e-value: 0.0069
score: 25.6
coord: 122..151
e-value: 3.3E-4
score: 30.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 89..121
score: 10.579
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 23..55
score: 11.327
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..88
score: 12.957
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..154
score: 11.968
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..95
e-value: 1.8E-28
score: 100.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 96..175
e-value: 1.6E-23
score: 85.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..173
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..87
e-value: 2.5E-13
score: 50.4
coord: 91..151
e-value: 1.7E-10
score: 41.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..175
score: 52.868
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 2..95
coord: 84..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15472contigEcto-sp13_S_contig15472:222..2839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15472.4086.1mRNA_Ecto-sp13_S_contig15472.4086.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15472 222..2839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15472.4086.1 ID=prot_Ecto-sp13_S_contig15472.4086.1|Name=mRNA_Ecto-sp13_S_contig15472.4086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANL
NAKTRIEHTPLHLACRYGHYNIALALLAKGAEVDSRDNELNTPLHKASSN
GHANLCLELVKRGATVSAVNASNYTPLHWAAYKGRTAAVEALLQVGADLT
AVAARGTTSLHAASYYGHLESVVIM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom