mRNA_Ecto-sp13_S_contig15464.4083.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15464.4083.1
Unique NamemRNA_Ecto-sp13_S_contig15464.4083.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: D7FUW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUW3_ECTSI)

HSP 1 Score: 523 bits (1348), Expect = 9.380e-177
Identity = 321/350 (91.71%), Postives = 321/350 (91.71%), Query Frame = 1
Query:    1 QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            QVKRLQGQVAVA                MLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERD LAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSN    XXXXXXXXXXXXXX       TNKAVKNLV QARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK
Sbjct:  217 QVKRLQGQVAVAXXXXXXXXXXXXXXXXMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDSLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNXXXXXXXXXXXXXXXXXXXXXXXXXTNKAVKNLVXQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 566          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A7S3XSM0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSM0_HETAK)

HSP 1 Score: 333 bits (855), Expect = 1.940e-104
Identity = 196/350 (56.00%), Postives = 253/350 (72.29%), Query Frame = 1
Query:    1 QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            Q+K  + Q+A+ E Q+   +  T +AD MLRETA EM LIAFEKKQLLQQW+ +L+GLARRDEALTAA  AL+EAQ+AARD+++E EG KRE  +A   +EGL  +R RLE+   F EEQ AK   ER+ LAERYAMLQRS+ Q++E+E K++ +  QLR QVD L    Q                +S Q T +KAVKNL +QA  V+  +HE E+E  + QNE AR++VD+LNTEAHN+QL++TL +  +EL +KD LIEKYQ EIRQR DEIEKKMY VDRLNR+YEKL E +++ EN+GPLES+++ LQKEI ++G E  +M+HEWLADQT LV +  ETE+L EK
Sbjct:  107 QLKAAEDQIALYEQQLAAQRTETAQADQMLRETAAEMELIAFEKKQLLQQWQSSLLGLARRDEALTAAGKALREAQAAARDHELEAEGTKRECARAIAANEGLEGLRQRLENEAKFAEEQGAKLAAEREQLAERYAMLQRSMTQTDEEERKVELVAGQLRQQVDTLQQNLQTVTRERQKLEEGIEANKSTQTTVSKAVKNLQKQAGEVLTVIHEKEIEGGHYQNEMARIKVDALNTEAHNVQLRDTLGKLLDELKAKDALIEKYQMEIRQRNDEIEKKMYRVDRLNRKYEKLTENIDDVENMGPLESTIRHLQKEIESVGNEVDQMQHEWLADQTTLVHTVAETEELLEK 456          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A7S2C2G7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2G7_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.290e-86
Identity = 169/350 (48.29%), Postives = 243/350 (69.43%), Query Frame = 1
Query:    1 QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            Q K+LQ QVA+ E+Q G    +T EA  +L ETA EM LIAFEKKQL+QQWK +L+ L +RDEA+ AA+ + +EA    RD + EIEG KR+   AQ ++E L+A+R+RL      ++EQ+ K   ERD LAERY MLQRS+AQ++++E+K+D++ T + ++V+  +   Q               +  ++ T NKAVKN ++ A A+    H+ E+E A+L+NE +R+RVD+LNT+AHN+QL+E + +   EL  KD+LIEKYQ EIRQR DEIEKKMY VDRLNR+YE L +  E+ E++GPLE+++ +L+KEI  + E   +++ EWLADQT+LVS++ ETE+  EK
Sbjct:  227 QRKQLQEQVALHESQFGNQADQTEEAKKILAETASEMELIAFEKKQLMQQWKTSLINLTKRDEAVAAATTSTQEASMQIRDLETEIEGTKRDIGTAQTQNETLVAMRERLGKEDVTLDEQIMKISNERDELAERYEMLQRSMAQTDDEEKKVDSVTTAIAAKVETANQNIQVVVRERQKVEASILTKNGERLTVNKAVKNYMKAAAAMTNAAHDKEIEAAHLENELSRIRVDTLNTDAHNVQLREMMEKQLTELKDKDKLIEKYQLEIRQRNDEIEKKMYRVDRLNRKYELLVDGQEDVEHMGPLEATISALRKEIVTVNEAATKLQREWLADQTQLVSTSSETEEKLEK 576          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: F0Y3X9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3X9_AURAN)

HSP 1 Score: 256 bits (655), Expect = 8.460e-75
Identity = 158/349 (45.27%), Postives = 226/349 (64.76%), Query Frame = 1
Query:    4 VKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            V++L  Q+AV E Q+   +  + EA GML ET  EM LIAFEKKQL+QQWK +LV L RRDEAL+AA+  L+ A+   RD   EI+G KRE L  + ++E L+ VRDRL      ++E + +   + + ++ ++A+LQRS+  +EE+E K+          ++ L+   Q                RS   T  KAV+NL +QA AV E+ HE E+ +A+L+NE +R+RVD+LNT+AHN QL+ETL     +L ++D LI KYQ EIRQR D+IEKKMY VDRLNR+YEK+ E  ++ E+VGPLE+++++L KE  ++  E  +++  WLADQT LVS+A +TE   EK
Sbjct:  163 VRQLGEQIAVHETQLAKQKAESDEARGMLAETGQEMELIAFEKKQLIQQWKASLVQLTRRDEALSAATQTLQAARMELRDLQTEIDGTKREALGVKADNESLVVVRDRLAREEQGLDEAIGQVVADCEAVSAQFALLQRSMVHTEEEEAKVAGEAKGSGDSLEQLAQNIQIVTVERMKIEQRILAARSASMTVTKAVRNLQKQALAVKERTHEKEITQAHLENELSRIRVDTLNTDAHNSQLRETLEGMVGKLKTQDELIAKYQQEIRQRNDDIEKKMYRVDRLNRKYEKMMEHADDGEHVGPLEATIRNLNKEKESIAVEATQLQGAWLADQTLLVSAAQQTEVTLEK 511          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A835YSP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP4_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.190e-68
Identity = 172/386 (44.56%), Postives = 223/386 (57.77%), Query Frame = 1
Query:    1 QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAH--------------EMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMG-------------------TQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEK-LREAVEEPENV---GPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAE 1047
            QVKRLQ QV + EAQI    G++ EA  M+RETA               EM +I FEKKQLLQQW+ ALVGLARRDEALTAA+NAL++A++A+R+++ EIEGLKRE +KAQ E+E L+AV+DRL+S   + +E L K K + D LAE Y MLQRS AQ EE+E ++DA                       L + V +L+   Q                  QQ TT+KA+  L +Q +  + + HE E EEANLQNE ARVRVD LNTEAHN QL+E +   + EL  +DRLI +YQ E                         ++ A E+   +   GPLE ++++L KEI A   E  R+KHEWL DQTKLVS+A  TE + E
Sbjct:  124 QVKRLQEQVVLQEAQIASQTGQSTEAQDMIRETAKASGPALRAVMLHLDEMEVIHFEKKQLLQQWRSALVGLARRDEALTAATNALRDAENASREHETEIEGLKREMVKAQAENETLVAVKDRLQSEGKYADELLEKLKADGDRLAETYTMLQRSKAQMEEEEGRVDASALLPLHPQLPQLLQQLLQRTAALDTPVGILTQSVQTVTRERQKLEKAAALAVEQQSTTSKAISILAKQRQQALAECHEKEAEEANLQNELARVRVDVLNTEAHNAQLRERVAEVDAELARRDRLIARYQLEXXXXXXXXXXXXXXXXXXXXXXXXXVQRAAEDEAGIEGNGPLEGAIRNLNKEIDATRAEQERLKHEWLRDQTKLVSTASATEDVLE 509          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A7S1XYJ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYJ4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.270e-66
Identity = 138/286 (48.25%), Postives = 201/286 (70.28%), Query Frame = 1
Query:  193 LTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            L AA  AL+EA +A  DYDIE+EG+KRE    Q  HE ++A +++LES R FVEE L K   +R+ L ER+A+LQRSLA +E +E+++D     L  Q++ L N  Q                ++ Q T +KAVKNL +++  V++Q H +E + ANL+NE +R+ +D LNTEAH +QL+ TL +  ++L +KDRLIEKYQ EIRQR DEIEKKMY VDRLNR+YEK+ E VE+ E++GPLE+++K+L++E+ A+G  +A+++ EWL DQT+LV+ A +TE+L ++
Sbjct:  287 LMAAKEALREAVTATGDYDIELEGVKREIRAVQFAHEAILARKEKLESERKFVEESLQKIHADRELLEERFALLQRSLATTEAEEKEVDDAKRDLTVQIESLDNSIQTVARERFKMENSIMEEKNLQITASKAVKNLNKKSVEVLDQRHGVEFDIANLENEMSRINIDKLNTEAHAVQLRGTLSKILDDLKAKDRLIEKYQLEIRQRNDEIEKKMYRVDRLNRKYEKMLEGVEDEESMGPLEATIKNLRRELEAVGTSSAQLQREWLRDQTQLVAYAAQTEELRDE 572          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A7S2SRR0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRR0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.410e-61
Identity = 134/286 (46.85%), Postives = 190/286 (66.43%), Query Frame = 1
Query:  199 AASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPEN--VGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            AAS  L+EA+   +D   EI GLKRE + AQ ++E L+A RDRL+     + EQ+ K + +RD LAERY MLQRS+AQ++E+E+ +DA    +  QV+ +    Q               + + + T  KAVKN  +  + +  ++HE E+E A ++NE +R+RVD+LNT+AHNLQLKE L +   +L  KD+LIEKYQ EIRQR DEIEKKMY VDRLNR+YE++ EA  + E   +GPLE+++K+++K++   GEEN  ++ EWL DQT LV+ A ETE+L EK
Sbjct:    2 AASKQLEEAKREIQDMTSEIIGLKREIIAAQAKNETLVATRDRLQREEQTLGEQIRKIRTDRDQLAERYQMLQRSMAQTDEEEKGVDAALADVHKQVETVVQNIQVVNQERQAVELEILNQENDKLTVAKAVKNFGKSMKQIRTRMHEKEIEAAGVENEMSRIRVDALNTQAHNLQLKEMLDKQVADLAEKDKLIEKYQLEIRQRNDEIEKKMYRVDRLNRKYEQMTEAAGDDEGPLLGPLEATIKNIKKDMQTTGEENGSLQREWLVDQTNLVTVAAETEELLEK 287          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A482T0P3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0P3_9ARCH)

HSP 1 Score: 202 bits (514), Expect = 1.090e-54
Identity = 153/350 (43.71%), Postives = 210/350 (60.00%), Query Frame = 1
Query:    1 QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            Q K+L  Q+ +   Q+   +  T +   ++++T  E+ LI+ EK+QL+ QWK AL GL+RRDEAL  A+  L  A+SA  DYD+EIE  +RE  K Q  HE L+ +RDR+E+   +VE+ L K K+ER  + ERY +L +SLAQ+E                          XXXXXXXXXXXXXX  S     NKAV NL +    +++ +H+ E E   ++N  AR  V+ LN  A N QLKE L    +EL  K+ L  KYQ EIRQR DEIEKKMY VDRLN++YEK+ E+    EN+GPLE+++K+L KEI     E   ++ EWL  QT++V+ + E + L EK
Sbjct:  229 QTKKLLEQIELVRKQLDAQKKDTSDITTVIQDTVKELDLISTEKQQLMVQWKAALSGLSRRDEALAQATATLSAAESAVHDYDVEIEASRRELQKEQARHETLVNLRDRMENELQWVEDSLNKIKQERSQMQERYTLLSKSLAQTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSTFSNVNKAVSNLDKDQNKLLKMIHQKENEANEIENAIARTVVEKLNISAVNDQLKEQLDVVTKELKEKESLAAKYQLEIRQRNDEIEKKMYRVDRLNKKYEKMVESAGGEENLGPLENTIKNLNKEIENTTLECKELEREWLRRQTEMVTMSAECDALHEK 578          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A7S2WDI7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WDI7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.270e-53
Identity = 136/345 (39.42%), Postives = 197/345 (57.10%), Query Frame = 1
Query:    4 VKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQ 1038
            + +LQ ++++ EAQ    +  T  A+  L+E + EM    FEKKQ++QQW   L+ L RRDEA  A SN ++  Q   +    EIEG K    K Q E E L+  + R E     VEEQL    +  + L+ERY+M+++SL Q + +  KL         Q+  L  Q Q                + ++ T +KA KNL R++  V + +H  EME A L+NE +RV++D LNT++H  QL + L     EL  KD++IEKY+ EIRQR DEIEKKMY VDRLNR++E +    +EPEN+GPLE+++K+L KE  A+  ++  ++  WL  QT+ V    E EQ
Sbjct:  126 IAQLQEELSLVEAQRESQRLETKAAEDTLQEASKEMQTTLFEKKQVVQQWNSTLIALQRRDEAYQAVSNTIQSKQEELQALRAEIEGYKVGAGKVQFESEKLVERKVRQEHSLRQVEEQLVNLDKAHNKLSERYSMMKKSLDQQDGECRKLKGTLASWTHQLKSLQTQIQLVNRERFTIEEKINQIQGEKTTMSKAAKNLSRESGKVFKVIHGKEMEIALLENEMSRVKIDKLNTQSHTEQLDQELNNQLAELKEKDKMIEKYKMEIRQRHDEIEKKMYVVDRLNRKFENMCTNADEPENLGPLEATIKNLTKETTAITTQSRELERTWLKLQTEYVQVVNEMEQ 470          
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Match: A0A6U2NYD3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2NYD3_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.900e-53
Identity = 128/350 (36.57%), Postives = 199/350 (56.86%), Query Frame = 1
Query:    1 QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQWKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEHEGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEEKLDAMGTQLRSQVDMLSNQAQAXXXXXXXXXXXXXXRRSQQCTTNKAVKNLVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRSEEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPENVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK 1050
            Q++RL+  +A++EAQ+ +  G+T EA  ML+ET  E+  IAFEKKQL+ QWK +LV LARRDEAL+ A   LK+  SA RD ++E EG++RE  KA EEHE L+++R+RL++    +EE   K + E       Y ML++SL  + E E +  ++   + S++  ++N                   + +Q    KA  NL +  ++++ ++HE E E AN+QNE AR+ +D LN E  N  L+E L+  +  L  K+                          LNRQYEK+ + +EEPE +GPLE+++KS +K+I    EE   M+ +WL+DQT LV +  + + + +K
Sbjct:  232 QIRRLEEDIALSEAQLTVQLGQTNEAKEMLQETVEELDRIAFEKKQLVLQWKSSLVALARRDEALSVAKGVLKDTLSATRDAEVETEGIRREIKKAVEEHESLLSLRNRLDTEAKSIEEATLKLRAEHQETLSEYDMLEKSLINANEREAQAHSLANSISSKMSSVNNSIDLVTRERHALEEKIDSAKHEQSAMLKATNNLKQTEKSLLAKIHEKEFEAANIQNELARISIDILNNEGRNHHLQEKLKEVKGALEEKNVQXXXXXXXXXXXXXXXXXXXXXXXXLNRQYEKMTDGLEEPEALGPLEATIKSYKKDIEQEDEEIQAMQRQWLSDQTSLVQTISDADAVQDK 581          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15464.4083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUW3_ECTSI9.380e-17791.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XSM0_HETAK1.940e-10456.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2C2G7_9STRA2.290e-8648.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0Y3X9_AURAN8.460e-7545.27Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835YSP4_9STRA1.190e-6844.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XYJ4_9STRA2.270e-6648.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SRR0_9STRA1.410e-6146.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482T0P3_9ARCH1.090e-5443.71Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2WDI7_9STRA1.270e-5339.42Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A6U2NYD3_9STRA1.900e-5336.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15464contigEcto-sp13_S_contig15464:238..3876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score530.0
Seed ortholog evalue8.3e-148
Seed eggNOG ortholog2880.D7FUW3
Preferred nameCCDC40
Model size1050
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0001655,GO:0001822,GO:0001889,GO:0001947,GO:0002009,GO:0003007,GO:0003143,GO:0003146,GO:0003341,GO:0003351,GO:0003352,GO:0003356,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0030323,GO:0030324,GO:0031016,GO:0031514,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032886,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035050,GO:0035082,GO:0035239,GO:0035295,GO:0035469,GO:0036159,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0048513,GO:0048562,GO:0048565,GO:0048568,GO:0048598,GO:0048729,GO:0048731,GO:0048732,GO:0048793,GO:0048856,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051641,GO:0051674,GO:0055123,GO:0060271,GO:0060287,GO:0060429,GO:0060541,GO:0060562,GO:0060632,GO:0061008,GO:0061371,GO:0061512,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071840,GO:0071907,GO:0071910,GO:0072001,GO:0072359,GO:0097014,GO:0097722,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons8
EggNOG free text desc.epithelial cilium movement involved in determination of left/right asymmetry
EggNOG OGs2CJ7Q@1,2QQ91@2759
Cds size1050
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15464.4083.1prot_Ecto-sp13_S_contig15464.4083.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15464 238..3876 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462821.4032984-CDS-Ecto-sp13_S_contig15464:237..3331681462821.4032984-CDS-Ecto-sp13_S_contig15464:237..333Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 238..333 -
1681462821.4129891-CDS-Ecto-sp13_S_contig15464:633..7531681462821.4129891-CDS-Ecto-sp13_S_contig15464:633..753Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 634..753 -
1681462821.4210937-CDS-Ecto-sp13_S_contig15464:1078..12601681462821.4210937-CDS-Ecto-sp13_S_contig15464:1078..1260Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 1079..1260 -
1681462821.4314826-CDS-Ecto-sp13_S_contig15464:1469..16351681462821.4314826-CDS-Ecto-sp13_S_contig15464:1469..1635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 1470..1635 -
1681462821.439959-CDS-Ecto-sp13_S_contig15464:2215..23261681462821.439959-CDS-Ecto-sp13_S_contig15464:2215..2326Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 2216..2326 -
1681462821.4482014-CDS-Ecto-sp13_S_contig15464:2748..28841681462821.4482014-CDS-Ecto-sp13_S_contig15464:2748..2884Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 2749..2884 -
1681462821.4570765-CDS-Ecto-sp13_S_contig15464:3293..34571681462821.4570765-CDS-Ecto-sp13_S_contig15464:3293..3457Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 3294..3457 -
1681462821.4664762-CDS-Ecto-sp13_S_contig15464:3801..38761681462821.4664762-CDS-Ecto-sp13_S_contig15464:3801..3876Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15464 3802..3876 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15464.4083.1

>prot_Ecto-sp13_S_contig15464.4083.1 ID=prot_Ecto-sp13_S_contig15464.4083.1|Name=mRNA_Ecto-sp13_S_contig15464.4083.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=350bp
QVKRLQGQVAVAEAQIGMSQGRTGEADGMLRETAHEMSLIAFEKKQLLQQ
WKGALVGLARRDEALTAASNALKEAQSAARDYDIEIEGLKRETLKAQEEH
EGLIAVRDRLESGRAFVEEQLAKTKEERDYLAERYAMLQRSLAQSEEDEE
KLDAMGTQLRSQVDMLSNQAQALTRERQKLEAEAAKRRSQQCTTNKAVKN
LVRQARAVVEQLHEIEMEEANLQNEEARVRVDSLNTEAHNLQLKETLRRS
EEELNSKDRLIEKYQTEIRQRGDEIEKKMYSVDRLNRQYEKLREAVEEPE
NVGPLESSVKSLQKEIAALGEENARMKHEWLADQTKLVSSAMETEQLAEK
back to top

mRNA from alignment at Ecto-sp13_S_contig15464:238..3876-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15464.4083.1 ID=mRNA_Ecto-sp13_S_contig15464.4083.1|Name=mRNA_Ecto-sp13_S_contig15464.4083.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15464:238..3876- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGAAACGTCTACAAGGGCAAGTCGCCGTAGCCGAAGCTCAGATCGG CATGTCTCAGGGGCGGACGGGAGAGGTGAGACAGACAATGAACGAAACAC GCCTTATTTCACGATCTATCAGGACCAATCTCTGCATCACCCCCTGGCCA TGGAATACCCCATTCCACAGAAATTGTGCTGTCGGAAATGTGTCAGGTGC ACCACGGAGGATGTTCGTCAATAGCGCCATAATAACTCCCATCTTCCCGT TTCGTGTATCGCACATAACGAAGGTGTAACAACGTCTTTTAGACGTTCAC TTCAATCATTCCCTTTCTTGGCTTCTCTTCCATGTTCGCGTGTCGTGTCC GCCTGCTGTCTCCGTCTCTCTTGCACTACCTGCACGGTGGCAAACTCCGA ACGACGTCATTGGGAGAAGGCCGATGGAATGCTCCGCGAGACGGCGCACG AGATGTCCCTGATCGCCTTCGAGAAGAAGCAGCTACTGCAGCAGTGGAAA GGAGCGTTGGTAGGCCTGGCCCGACGCGACGAGGCTCTAACCGCCGCGTC GAACGCTCTTAAGGAAGCTCAGTCCGCCGCCAGGTTAGTTGTCCATACGT GGAATGCGGTTGTGTTGATTGACTTCTCTCGAGTCAGCCGTAGACAATAC TTGAGGTTTTCTGGCTGTGCCCACTAGAGTCAACAGCTCCAGTCTGACGC ATTGCTACCGCTGGACAAGGGCACATTCTTCAAAAGGTTCTGGATGTCCC GGTAAAGAGAAAGATGGTCAAGAGAGGGGAAGGTCTGAGCCCCTGTGATG AATAAGATTGTTTTGGGTTCACCACCAAGGGAAAGCAATAGGAGCATGAT TGATACCTGTTACACTCTTCCTGGATACAGCAACGTTTCGAGCAAAATAT TAGAGATTTGTACCCCCAAGGACAAGTACAATCTTTCACCCTGGGCCGCA CGGTGACATGTGTACGTTCGTATGGGGTTGTTTGACGTCCAGAGACTACG ACATCGAGATAGAAGGGTTGAAGAGAGAGACGCTTAAGGCGCAGGAGGAA CACGAAGGACTGATCGCCGTCAGAGACCGCCTGGAGAGCGGTCGTGCCTT CGTCGAAGAACAGCTGGCCAAGACGAAGGTGTGGTGCCTATTGTAGCGCT TCACATAGGAGTGCTTGTTTTTCCCGCGCCGTTGTAGTGTTGGGGTTCGA GCCCGGACCCATGAAAAGGGTCTACCACCAAAACATGTTCCTCAGGCTTT CGCATTCCACAGAGAACTCGCATTCTTGTGAGCAGTGAGAGTGAAAGGCC GTGGCTCATGCTCCACCCAGCAACAGGGGAAAGGATGGTGGAGATGGACA TCCAGGCTGATGTCAGAGTAACTGTGATTCGGAAGCTGGGAAGTGCCGGA ATGTAGGTTGACGTCACAGACCATTCCTTTCCGAAGCGGGTCAGGTGTCA AAGGAGAGGTTCTTGGGTCCAGATGTGTGTAAAATTTTGTTTGAAACGAG TGCTTCTACGTTCTTCGCTAAACCTTTCTGCTTGGTTGGTCGATCCGTAG GAGGAGCGAGATTATTTGGCCGAGCGCTACGCGATGCTGCAGAGGTCCCT AGCACAATCCGAGGAAGACGAGGAAAAGCTCGATGCCATGGGAACGCAGC TGAGGAGCCAGGTAAAGACGTTTGTCACAGCTCATCCATTTATATTCTGG GGGTACGCTACGATTCAAACCTTGTCATTGCCCGCCCACGCCAGCGAAAG GATTCATCAAGCGCTCTTCGAAAGCAAAAGTGGATAGATGTTCGTGTTGC ATTTTGTATTGAACCCGAGCGTAAAGCCAGTGCAGAACGAGCAAGTGCGA CACAGCCGGGGCGAAAACCTTCTTTGAGCGGACCAATCGAAGAGCGGGAA CATTCTTCCGCACCTGTAAATACTCACATGCCGAATATGTATTCGGTCGT TGCCGCTCCTATGAAGTGTCACTGGGGTTGGCTCTGTGTGCTAAAACTCG TCATCGACGCGAGAAAGTTGCAGTATGGATCTTGTATTCTTGATATCGGG TTCGTTGAAGGATACAACAGTTCGTCCACGCACATGTGAGGTGAGCAGTT CGACGTGCCTTTTAACGCAGTGTGTCAGCCCCCCTCACACTGTTGTTACC CCTGGGACGCTCTCGTACGAACAACTGACCACGTGTGCAAAGCCTCGAAC TGTCACCCACGAAGCCAAATCGCGTCGAAAAACCTTCCCAGGTGGACATG CTCTCCAACCAAGCGCAAGCCCTCACGAGGGAGAGACAGAAGTTAGAGGC AGAAGCGGCAAAGAGAAGGTCCCAGCAGTGCACCACGAACAAGGCCGTCA AGAACCTGGTTCGCCAGGCGCGCGCAGTGGTGGAGCAACTCCACGAGATC GAAATGGGTAAGACACGACTGAAACCACCAGGCCGTGTTTTTTCAACGTT TGCGGTCGGCAAGATCGAATCTTGTCTTGCGAGAGGCTGTTTTCGGCGCG GACCAGCCGCTGGGATGATGCTGGTACCTCACGCCCAACGAAGGACAACG TTACGCGAACAACAGTCAGCTGAATCCAATTTCGGAATAACCCTTGTTCA ACCTTGGCCGTGGCAGAGGAGGCCAACCTCCAGAACGAAGAAGCGCGGGT TCGAGTCGACTCTCTCAATACCGAGGCTCATAACCTGCAGCTGAAGGAAA CTCTGAGGAGGAGCGAGGAGGAGCTGAACAGCAAGGACCGCCTCATCGAG AAGTATCAGACCGAGATCAGGCAGCGAGGCGACGAGATCGAGAAAAAGGT AGGGAGGCATTGACGGGGTTCGGGGGGAGCTGGACGAAGGGAGCGTGTTT CAGGGGGTGGCATTGTGGTCGGAGGTGTAATTTGGTCAAGTCGTGTCTGC CCGGGTTTTCTAGGTACGAAACGCGCCTCTAGGAGAACCTGCAGTAGGGG CTCTGTAAAACAGACCGAGCAAGGGCGCACCGACTCGATCCTCTCCCTCC ACATCTTACGCTCACGAAGAAGGCGAAAGCGTCTTCAAGTTTCACCCGGT CTGCCTGTACGCACACCACACCCATCGTTCTAACCCCACCTTCTGCCGCG GCGGGCAAACGCCGCACTATCAGATGTACAGCGTAGACCGATTGAACCGG CAGTACGAGAAGCTGAGGGAGGCGGTGGAGGAGCCGGAGAACGTGGGGCC TTTGGAGTCGTCCGTGAAAAGCCTTCAAAAGGAGATAGCAGCGGTGAGCC TGGCCCATGGGCCACACACTTACACAAGAGGAGTGCCGTGGTATATTTGC TCTGGCGTGTGTTCCCTTGTATGGATCGCCGTTGCAACAGGACTTTTGCC GCCCTATATCTTTGATTAAGGCTTCCTCGGCTGGTCCTGATTCGGTTGCG GGACACCATTCGCTATGGGCGTATCAGGCCTCCCCGGCTGGTCCCGGTGC TATGGGCGTGCAACCTATGGTTGCGACCGTAGTTTCCTAGTTCTTTTCTT ACGCCATTCCCCCCCCCCCTTCTCGGCTTTTGCTACCTTGAAGCTGGGTG AAGAGAACGCTCGCATGAAACACGAGTGGCTGGCGGACCAGACTAAGCTT GTGTCTTCCGCCATGGAAACGGAGCAACTGGCGGAAAAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15464:238..3876-

>mRNA_Ecto-sp13_S_contig15464.4083.1 ID=mRNA_Ecto-sp13_S_contig15464.4083.1|Name=mRNA_Ecto-sp13_S_contig15464.4083.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15464:238..3876- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGAAACGTCTACAAGGGCAAGTCGCCGTAGCCGAAGCTCAGATCGG
CATGTCTCAGGGGCGGACGGGAGAGGCCGATGGAATGCTCCGCGAGACGG
CGCACGAGATGTCCCTGATCGCCTTCGAGAAGAAGCAGCTACTGCAGCAG
TGGAAAGGAGCGTTGGTAGGCCTGGCCCGACGCGACGAGGCTCTAACCGC
CGCGTCGAACGCTCTTAAGGAAGCTCAGTCCGCCGCCAGAGACTACGACA
TCGAGATAGAAGGGTTGAAGAGAGAGACGCTTAAGGCGCAGGAGGAACAC
GAAGGACTGATCGCCGTCAGAGACCGCCTGGAGAGCGGTCGTGCCTTCGT
CGAAGAACAGCTGGCCAAGACGAAGGAGGAGCGAGATTATTTGGCCGAGC
GCTACGCGATGCTGCAGAGGTCCCTAGCACAATCCGAGGAAGACGAGGAA
AAGCTCGATGCCATGGGAACGCAGCTGAGGAGCCAGGTGGACATGCTCTC
CAACCAAGCGCAAGCCCTCACGAGGGAGAGACAGAAGTTAGAGGCAGAAG
CGGCAAAGAGAAGGTCCCAGCAGTGCACCACGAACAAGGCCGTCAAGAAC
CTGGTTCGCCAGGCGCGCGCAGTGGTGGAGCAACTCCACGAGATCGAAAT
GGAGGAGGCCAACCTCCAGAACGAAGAAGCGCGGGTTCGAGTCGACTCTC
TCAATACCGAGGCTCATAACCTGCAGCTGAAGGAAACTCTGAGGAGGAGC
GAGGAGGAGCTGAACAGCAAGGACCGCCTCATCGAGAAGTATCAGACCGA
GATCAGGCAGCGAGGCGACGAGATCGAGAAAAAGATGTACAGCGTAGACC
GATTGAACCGGCAGTACGAGAAGCTGAGGGAGGCGGTGGAGGAGCCGGAG
AACGTGGGGCCTTTGGAGTCGTCCGTGAAAAGCCTTCAAAAGGAGATAGC
AGCGCTGGGTGAAGAGAACGCTCGCATGAAACACGAGTGGCTGGCGGACC
AGACTAAGCTTGTGTCTTCCGCCATGGAAACGGAGCAACTGGCGGAAAAG
back to top