prot_Ecto-sp13_S_contig15463.4082.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15463.4082.1
Unique Nameprot_Ecto-sp13_S_contig15463.4082.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length537
Homology
BLAST of mRNA_Ecto-sp13_S_contig15463.4082.1 vs. uniprot
Match: D7G8X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X3_ECTSI)

HSP 1 Score: 528 bits (1361), Expect = 9.270e-177
Identity = 384/557 (68.94%), Postives = 406/557 (72.89%), Query Frame = 0
Query:    1 ASTSRRLRAREPCLAWGDWDDASLKIFMAEEVRTSRHPAKRLRQVEEFYHRAALPMLARQWNVPFLSKVSATTPTTSTRLSTTATTSFPQRSR-------YSQFLQLWEDVCETHHGVRDFAFPSKGAVSSARGAFSEVLGEKRPEEQRREKFCELLDVLMKLEPRPPALRHFLAPWPTESSAGSSTTTAGLFGGRRNQEGQHQQEQSRGENGASWAGTRTTGNGAGGGPESASFGGIWLNGGGSDARRKDQP-EQPLLQGVAAGGLPVTPGRLPHSDRSRGSTTTTRQAGVAAATAEKHSAVPLPRDLRLWVFLALVGVLEACAAARALGVTALSLPVTLXXXXXXXXXXXXXXSVSSRSRSWPSRQGQQERWMLNRPPQLDAGSGGVRRRATAMSFWRRPWQPHLLGGVAAXXXXXXXXXXXXXXXXXXX---AAVGLDGXXXXXXXXX---------SNGGGRYGCXXXXXXXXXXXXXXXXGTHRRSGGVASSSSPTRGRAPRGVRRRSPARPPIGRRGAGGVNDLGLGLGASSSPATAVGGVRAVAAGVPGG 537
            AS S RLRAREPCLAW DWDD SLK+F+AEE RTSRHP K  RQVEEFYHRAALP LARQWNVPFLSK +        R+STT++ +    SR       YS FLQLWEDVCETH GVRDFAFP KGAVSSARGAFSEVLGEKRPEEQRRE FCELL VLMKLEPRPPALRHFLAPWPTES+A SST    L GGRRN+EGQHQQEQ+RGE+ ASWAGTR                                   Q  L+GVAAGGLPVT  R PH+DRSRGSTTT RQ GVAAATAE  SAVPLPR+ RLW FL L+GVLEACAA RALGVTALSLPVTL  XXXXXXXXXXXX              +Q      RPPQ+DA SG  RRRATA+ F RRPW+P+LLGGVAA XXXXXXXXXXXXXXXXXX   AAVGL GXXXXXXXXX            G R G  XXXXXXXXXXXXX   T RRSGG ASS SPTRGR PR  RRRSPARPP+GRRG   VNDLG+GL ASSSPATAVGGVRAVAAGVPGG
Sbjct:  283 ASPSWRLRAREPCLAWRDWDDLSLKVFLAEEARTSRHPVKWRRQVEEFYHRAALPTLARQWNVPFLSKGNFCGRRRQPRISTTSSATTAASSRGGSDLPPYSHFLQLWEDVCETHDGVRDFAFPPKGAVSSARGAFSEVLGEKRPEEQRRETFCELLGVLMKLEPRPPALRHFLAPWPTESTASSSTAATRLVGGRRNREGQHQQEQARGEDEASWAGTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQQRLRGVAAGGLPVTLDRPPHNDRSRGSTTTIRQVGVAAATAEGQSAVPLPRNFRLWAFLTLLGVLEACAALRALGVTALSLPVTLVLXXXXXXXXXXXXXXXXXXXXXXXXXXRQRD---RRPPQVDADSGDDRRRATAVPFGRRPWEPNLLGGVAAAXXXXXXXXXXXXXXXXXXXXAAAVGLGGXXXXXXXXXXXXXXXXXXGGSGARAGAPXXXXXXXXXXXXX---TRRRSGGAASSGSPTRGRVPRRARRRSPARPPMGRRGRECVNDLGIGLSASSSPATAVGGVRAVAAGVPGG 833          
BLAST of mRNA_Ecto-sp13_S_contig15463.4082.1 vs. uniprot
Match: A0A6H5JLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB3_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 8.150e-147
Identity = 330/506 (65.22%), Postives = 342/506 (67.59%), Query Frame = 0
Query:   93 RYSQFLQLWEDVCETHHGVRDFAFPSKGAVSSARGAFSEVLGEKRPEEQRREKFCELLDVLMKLEPRPPALRHFLAPWPTESSAGSSTTTAGLFGGRRNQEGQHQQEQSRGENGASWAGTRTTGNGAGGGPESA---------SFGGIWLNGGGSDARRKDQPEQPLLQGVAAGGLPVTPGRLPHSDRSRGSTTTTRQAGVAAATAEKHSAVPLPRDLRLWVFLALVGVLEACAAARALGVTALSLPVTLXXXXXXXXXXXXXXSVSSRSRSWPSRQGQQERWMLNRPPQLDAGSGGVRRRATAMSFWRRPWQPHLLGGVAAXXXXXXXXXXXXXXXXXXXAAVGLDGXXXXXXXXXSNGGGRYGCXXXXXXXXXXXXXXXX----------------------------------------------------GTHRRSGGVASSSSPTRGRAPRGVRRRSPARPPIGRRGAGGVNDLGLGLGASSSPATAVGGVRAVAAGVPGG 537
            RYS FLQLWED+CETHHGVRDF FP KGAVSSARGAFSEVLGEKRPE+QRREKFCELL+VLMKLEPRPPALRHFLAPWPTES+A SST   GL GG                                               SFGGIWL GGGSDARR+DQ EQ  L+GVAA GLPVTP R PH+DR+RGST TTRQAGV AATAE+HSAVPLPRDLRLWVFL LVGVLEACAA RALGVTALSLPVTL              SVSSRSRS PSRQGQQER  L+RPPQLDA SGGVR RATA+SF RRPWQPHLLGGVAAXXXXXXXXXXXXXXXXXXX      G     XXXX         XXXXXXXXXXXXXXXX                                                    GT RRSG V SSSSPTRGRAPRGVRR+SPARPPIG RGAGGVN LGLGLGASS PATAVGGVRAVAAGVPGG
Sbjct:  603 RYSHFLQLWEDICETHHGVRDFTFPPKGAVSSARGAFSEVLGEKRPEDQRREKFCELLEVLMKLEPRPPALRHFLAPWPTESTASSSTAATGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFGGIWLTGGGSDARRRDQREQLRLRGVAAEGLPVTPDRPPHNDRTRGSTATTRQAGVEAATAEEHSAVPLPRDLRLWVFLTLVGVLEACAAVRALGVTALSLPVTLVLTAIAPAVAAVAFSVSSRSRSCPSRQGQQERRKLSRPPQLDADSGGVRGRATALSFGRRPWQPHLLGGVAAXXXXXXXXXXXXXXXXXXXXXXXXXGAAATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGTPRRSGVVTSSSSPTRGRAPRGVRRKSPARPPIGHRGAGGVNALGLGLGASSFPATAVGGVRAVAAGVPGG 1108          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15463.4082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8X3_ECTSI9.270e-17768.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLB3_9PHAE8.150e-14765.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..321
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 322..326
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 350..537
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..349
NoneNo IPR availableTMHMMTMhelixcoord: 399..421
NoneNo IPR availableTMHMMTMhelixcoord: 327..349
NoneNo IPR availableTMHMMTMhelixcoord: 301..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15463contigEcto-sp13_S_contig15463:3..4146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15463.4082.1mRNA_Ecto-sp13_S_contig15463.4082.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15463 3..4146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15463.4082.1 ID=prot_Ecto-sp13_S_contig15463.4082.1|Name=mRNA_Ecto-sp13_S_contig15463.4082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=537bp
ASTSRRLRAREPCLAWGDWDDASLKIFMAEEVRTSRHPAKRLRQVEEFYH
RAALPMLARQWNVPFLSKVSATTPTTSTRLSTTATTSFPQRSRYSQFLQL
WEDVCETHHGVRDFAFPSKGAVSSARGAFSEVLGEKRPEEQRREKFCELL
DVLMKLEPRPPALRHFLAPWPTESSAGSSTTTAGLFGGRRNQEGQHQQEQ
SRGENGASWAGTRTTGNGAGGGPESASFGGIWLNGGGSDARRKDQPEQPL
LQGVAAGGLPVTPGRLPHSDRSRGSTTTTRQAGVAAATAEKHSAVPLPRD
LRLWVFLALVGVLEACAAARALGVTALSLPVTLVLTAIAPAVAAVAFSVS
SRSRSWPSRQGQQERWMLNRPPQLDAGSGGVRRRATAMSFWRRPWQPHLL
GGVAAAAAAAVGLGGLHGGGGGGGAAVGLDGVGGGGSGGGSNGGGRYGCG
GAAAATSAVGLGGRGGTHRRSGGVASSSSPTRGRAPRGVRRRSPARPPIG
RRGAGGVNDLGLGLGASSSPATAVGGVRAVAAGVPGG
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