mRNA_Ecto-sp13_S_contig15461.4081.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: D8LLZ6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLZ6_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 2.980e-135 Identity = 214/262 (81.68%), Postives = 218/262 (83.21%), Query Frame = 1
Query: 1 TVLSMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHLYDDAVAVDESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGDPWRPGDQGGGEDSLTSSAGVALSRGGGGGFVLLDGDGSGSPPIRGPQADGQGWIDSNAAGGGGGRSTSNLT 786
++ SMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHLYDDAVAVDESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGW+WLFCSMPETKGLPL EIELLFAREGDPWRPGDQG RGPQADG+GWID N GG STSNLT
Sbjct: 315 SIFSMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHLYDDAVAVDESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWVWLFCSMPETKGLPLEEIELLFAREGDPWRPGDQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGPQADGRGWIDPNVGGGERVGSTSNLT 576
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A7S2XTN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTN3_9STRA) HSP 1 Score: 153 bits (387), Expect = 6.060e-41 Identity = 98/265 (36.98%), Postives = 135/265 (50.94%), Query Frame = 1
Query: 1 TVLSMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGF-----------HLYDDAVAVDESALAKRYA-----------------------YMV------------------------------------------VGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFARE 567
++ +MAG+S++ SIWL+ TA AQ GV IG++ +++ GR+ L LTSLGMV+ +L LLG F D A D + L A Y V V M+ YL +FG+GMS LPWT+ +EIYP R+L T+ ST VNW GNV+VSA+FL++AS A LG +GAFWLYA I + G++WL ++PETKGL L +IE LF+++
Sbjct: 78 SIYNMAGYSNEISIWLSGYTALAQFAGVMIGLFLVDRVGRKPLLLTSLGMVTLSLGLLGFSFVSMANNSPVVNFAPDPQCASDHNWLWGNVATKNCAKCLDIAGCGFCGSPDGAGYCVPIGEDGRPTGECSTFQSLDNYGVDFDPWTTDTCAVEGGGTLSVVAMVLYLLSFGIGMSGLPWTLTSEIYPQKTRALMTAVSTGVNWAGNVLVSASFLSIASPAVLGPNGAFWLYALIGLNGFLWLSFNLPETKGLTLEQIESLFSKQ 342
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A448ZQ67_9STRA (MFS domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ67_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.380e-38 Identity = 95/279 (34.05%), Postives = 131/279 (46.95%), Query Frame = 1
Query: 1 TVLSMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHL----------------------------------------------------------------------YDDAVAV--DESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGDPWRPGDQGGGEDSLTS 621
++ MAG+ + ++WL+ TA AQ VG+ I+ +++ GRRTL L+SLG V+ +L L F+L YD D A Y + V M+ YL FG+GM +PWT+N+EIYP RS+ S ST NW+GN+V+SATFLTL+S L GAF LY ++A+ GW+WLF +PETKGL L +IE LF R PW + GGE+ T+
Sbjct: 419 SIYQMAGYDELTAVWLSGFTALAQVVGIATSIFLVDRAGRRTLVLSSLGFVALSLAGLAGSFYLSRITSGEVVSASGGCASQPAAVWDGLTAYCYDCVGLEGCGYSGGTCLPGSXAGPLLGGXTAAGSNATTWEYDGCTGTGGDPGAKKNPYGLLSVVFMVLYLLAFGIGMGGMPWTINSEIYPLEYRSMAVSLSTATNWIGNLVISATFLTLSSPGVLTAYGAFGLYGAVALIGWVWLFWXLPETKGLSLEDIEELFRR---PWDNENGRGGEEQRTT 694
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A836CJI9_9STRA (Solute carrier family 2, member 13-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI9_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.600e-38 Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 214 DESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGD 573
D + ++ +M+AYL FG+G+SS+PWTVNAEIYP ARSLGTS ST VNW GNVVVSATFL++A+ AL + GAFWLYA++AVAGW W +MPET GL L E+E LF R+GD
Sbjct: 465 DAACSNGALGWLAALSMVAYLACFGIGLSSVPWTVNAEIYPQRARSLGTSVSTCVNWAGNVVVSATFLSIAAPTALSQHGAFWLYAAVAVAGWAWARAAMPETAGLSLEEVEALFERDGD 584
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A7S3XQ08_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ08_HETAK) HSP 1 Score: 140 bits (353), Expect = 2.910e-38 Identity = 68/118 (57.63%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 214 DESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFARE 567
+ A YA++ M+ YL FGVGMSS+PWTVNAEIYP H RS T+ +T+VNW GNV+VSA+FLTLAS A L GAFWLYA++ AGW+WL+ MPET+GL L EI F E
Sbjct: 27 EPRACPDPYAWLAAAAMVGYLLAFGVGMSSVPWTVNAEIYPLHVRSACTALATSVNWAGNVLVSASFLTLASPAWLQPHGAFWLYAAVGCAGWVWLWARMPETRGLGLEEIVARFRGE 144
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A7S4QAY8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QAY8_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.460e-36 Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 223 ALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGD 573
A RY YM V M+AYL +FG+GM LPWT+N+EIYP RS S ST NW+GN+VVS+TFLT+AS + L GAFWLY ++A GW WL+C MPETKGL L EIELLF ++ D
Sbjct: 443 ACENRYGYMSVFFMVAYLLSFGIGMGPLPWTINSEIYPLTHRSRAVSLSTATNWIGNLVVSSTFLTIASPSILTTYGAFWLYTALAFLGWCWLYCVMPETKGLSLEEIELLFRKDED 559
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A7S1ZU92_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZU92_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.970e-36 Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 223 ALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGD 573
A RY YM V M+AYL +FG+GM LPWT+N+EIYP RS S ST NW+GN+VVS+TFLT+AS + L GAFWLY ++A GW WL+C MPETKGL L EIELLF ++ D
Sbjct: 592 ACENRYGYMSVFFMVAYLLSFGIGMGPLPWTINSEIYPLTHRSRAVSLSTATNWIGNLVVSSTFLTIASPSILTTYGAFWLYTALAFLGWCWLYCVMPETKGLSLEEIELLFRKDED 708
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A1E7FZW1_9STRA (General substrate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZW1_9STRA) HSP 1 Score: 144 bits (362), Expect = 8.030e-36 Identity = 94/272 (34.56%), Postives = 123/272 (45.22%), Query Frame = 1
Query: 1 TVLSMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHLYDDAVAVDESALAKR-----------------YAYMVVGT----------------------------------------------------------------MMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGD 573
++ MAG+ + ++WL+ TA AQ VG+ I ++K GRRTL L SLG V+ +LV GL Y + E A Y Y VG M+ YL FG+GM +PWT+N+EIY RSL S ST NW+GN+++SATFLTL+S +AL GAF LY S+A+ GW+WL+ +PETKGL L EIE LF R GD
Sbjct: 274 SIYEMAGYDELTAVWLSGFTALAQVVGIATSIVLVDKAGRRTLVLFSLGFVTLSLV--GLAGSFYLSRITSGEIVFASSDGGCDYQPATIWDGITTYCYDCVGIPGCGYCNGVCFPGDVLGPVIVEDTSSFQSSCGSSNNSNTAGTTAVGNWEYDACSGGGSSISVIFMVLYLLAFGIGMGGMPWTINSEIYCLKYRSLAVSFSTATNWIGNLIISATFLTLSSPSALTAYGAFGLYGSVALFGWIWLYYKLPETKGLSLEEIEELFQRPGD 543
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A6U0HHS3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HHS3_9STRA) HSP 1 Score: 133 bits (335), Expect = 9.840e-36 Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 232 KRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGD 573
R+ M V M+AYL FG+GM LPWT+N+EIYP RSL S ST NW+ N++VSATFL++AS AL GAFWLY SIA GW WL+ ++PETKGL L EIE LF + D
Sbjct: 11 NRFGVMSVFFMVAYLLAFGIGMGPLPWTINSEIYPLTHRSLAVSLSTATNWISNLLVSATFLSIASPGALTTYGAFWLYTSIAFLGWCWLYYALPETKGLSLEEIENLFRKGED 124
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Match: A0A8J9X216_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X216_PHATR) HSP 1 Score: 140 bits (352), Expect = 1.020e-35 Identity = 65/114 (57.02%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 232 KRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWMWLFCSMPETKGLPLGEIELLFAREGD 573
+ ++ V M+AYLF FGVGM LPWT+N+EIYP RSL S ST NW+GN++V+ATFL+L+S A L GAFWLYAS+A+ G +WL+ ++PETKGL L +IE LF R GD
Sbjct: 199 NAFGWLSVFFMVAYLFAFGVGMGGLPWTINSEIYPLRHRSLAVSCSTATNWIGNLIVAATFLSLSSPATLTTYGAFWLYASVAIVGLLWLYFALPETKGLSLEDIEKLFRRPGD 312 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15461.4081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15461.4081.1 >prot_Ecto-sp13_S_contig15461.4081.1 ID=prot_Ecto-sp13_S_contig15461.4081.1|Name=mRNA_Ecto-sp13_S_contig15461.4081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp MAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTAback to top mRNA from alignment at Ecto-sp13_S_contig15461:3242..4030- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15461.4081.1 ID=mRNA_Ecto-sp13_S_contig15461.4081.1|Name=mRNA_Ecto-sp13_S_contig15461.4081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15461:3242..4030- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15461:3242..4030- >mRNA_Ecto-sp13_S_contig15461.4081.1 ID=mRNA_Ecto-sp13_S_contig15461.4081.1|Name=mRNA_Ecto-sp13_S_contig15461.4081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15461:3242..4030- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |