prot_Ecto-sp13_S_contig15447.4074.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15447.4074.1
Unique Nameprot_Ecto-sp13_S_contig15447.4074.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15447.4074.1 vs. uniprot
Match: D8LIF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF9_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 6.470e-49
Identity = 92/97 (94.85%), Postives = 97/97 (100.00%), Query Frame = 0 
Query:    1 MSVLVSALEPSRWALGYRSVEQAVAGAHVSGSPFRLVVVEGAVAANASLAFGVGIDSPLAGGVFGTSAFTVRARDSMGNRVSSGSTGDFNVEVFLAD 97
            MSVLVS+LEPSRWALGYRSVEQA+AGAHVSGSPFRL+VVEGAVAANASLAFGVGIDSPLAGGVFGTSAFT+RARDSMGNRVSSGSTGDFNVE+FLAD
Sbjct: 1693 MSVLVSSLEPSRWALGYRSVEQAMAGAHVSGSPFRLLVVEGAVAANASLAFGVGIDSPLAGGVFGTSAFTIRARDSMGNRVSSGSTGDFNVELFLAD 1789
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15447.4074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF9_ECTSI6.470e-4994.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15447contigEcto-sp13_S_contig15447:857..2203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15447.4074.1mRNA_Ecto-sp13_S_contig15447.4074.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15447 857..2226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15447.4074.1 ID=prot_Ecto-sp13_S_contig15447.4074.1|Name=mRNA_Ecto-sp13_S_contig15447.4074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MSVLVSALEPSRWALGYRSVEQAVAGAHVSGSPFRLVVVEGAVAANASLA
FGVGIDSPLAGGVFGTSAFTVRARDSMGNRVSSGSTGDFNVEVFLAD
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