prot_Ecto-sp13_S_contig1544.4068.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1544.4068.1
Unique Nameprot_Ecto-sp13_S_contig1544.4068.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1544.4068.1 vs. uniprot
Match: A0A6H5KIR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR6_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 3.470e-89
Identity = 161/194 (82.99%), Postives = 169/194 (87.11%), Query Frame = 0 
Query:    1 MSCVTGAYDTSEGWRLILSKSRNAAGRGGSNSRKRELRSCL----------------WLRDHDPCTVDGLLESALVGDDKKTRLAAAGTLLAVTDALEKALWPIKEDGLSPARGATTRPGPPSSVRQVAAAAKSASDELRVLSGLAVSLAERFVPVLTAIAEGIPPPPSRVLPPQQQRNAPATGAEVDAATAAA 178
            MSC TGA+DTSEGWRLILSK RNAA RGGSNSRKRELRSCL                WLRDHD CTVDGLLESALVGDDKKTRLAA GTLLAVTD+LEK LWPIKEDGLSPARGATTRPGPPSSVRQVAAAA+SASDE+RVLSGLAVSLAERFVP+LTAIAEG+PPPPSRVLPPQQQRNA  TGA ++AATAAA
Sbjct:    1 MSCATGAHDTSEGWRLILSKIRNAADRGGSNSRKRELRSCLNRQGLQIVPVIRRAVRWLRDHDSCTVDGLLESALVGDDKKTRLAAVGTLLAVTDSLEKGLWPIKEDGLSPARGATTRPGPPSSVRQVAAAARSASDEVRVLSGLAVSLAERFVPLLTAIAEGMPPPPSRVLPPQQQRNASGTGAGMEAATAAA 194
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BLAST of mRNA_Ecto-sp13_S_contig1544.4068.1 vs. uniprot
Match: D7G4H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H8_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 6.450e-57
Identity = 99/108 (91.67%), Postives = 105/108 (97.22%), Query Frame = 0 
Query:    1 MSCVTGAYDTSEGWRLILSKSRNAAGRGGSNSRKRELRSCLWLRDHDPCTVDGLLESALVGDDKKTRLAAAGTLLAVTDALEKALWPIKEDGLSPARGATTRPGPPSS 108
            MSC TGA+D SEGWRLILSK+RNAAGRGGSNSRKR+LRSCLWLRDHDPCTVDGLLE+ALVGDDKKTRLAAAGTLLAVTDALEKALWPI++ GLSPARGATTRPGPPSS
Sbjct:    1 MSCATGAHDNSEGWRLILSKTRNAAGRGGSNSRKRDLRSCLWLRDHDPCTVDGLLEAALVGDDKKTRLAAAGTLLAVTDALEKALWPIEKGGLSPARGATTRPGPPSS 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1544.4068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIR6_9PHAE3.470e-8982.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4H8_ECTSI6.450e-5791.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1544contigEcto-sp13_S_contig1544:1137..2580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1544.4068.1mRNA_Ecto-sp13_S_contig1544.4068.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1544 1137..2595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1544.4068.1 ID=prot_Ecto-sp13_S_contig1544.4068.1|Name=mRNA_Ecto-sp13_S_contig1544.4068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MSCVTGAYDTSEGWRLILSKSRNAAGRGGSNSRKRELRSCLWLRDHDPCT
VDGLLESALVGDDKKTRLAAAGTLLAVTDALEKALWPIKEDGLSPARGAT
TRPGPPSSVRQVAAAAKSASDELRVLSGLAVSLAERFVPVLTAIAEGIPP
PPSRVLPPQQQRNAPATGAEVDAATAAAGAGDKTPSPTAAVAKTT
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