prot_Ecto-sp13_S_contig15435.4065.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15435.4065.1
Unique Nameprot_Ecto-sp13_S_contig15435.4065.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: D7FVK1_ECTSI (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK1_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 4.300e-132
Identity = 191/195 (97.95%), Postives = 193/195 (98.97%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCR+RGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVA SQDPAL+PLPVIGNGDILSWRDHEERLEQARELQSQQGEG GSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR
Sbjct:  437 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRKRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAVSQDPALRPLPVIGNGDILSWRDHEERLEQARELQSQQGEGEGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 631          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A835ZAB5_9STRA (Dus domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAB5_9STRA)

HSP 1 Score: 241 bits (615), Expect = 8.320e-76
Identity = 116/196 (59.18%), Postives = 145/196 (73.98%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGS-VARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVDINMGCPIDLVC +GMG+ALM + RK+RGI+ GM+S L  P+TVKMRVGWD+K P A  ++  +Q          F G  V  VMIHGRSRLQRY+K ADW+Y+R+ AAS+   L+PLPVIGNGDI+SW+DH++ L++           GG   STC M+ RGALIKPWLPTE+KEKRDWDIS++ERLDI +
Sbjct:   88 VDFVDINMGCPIDLVCKQGMGSALMNKQRKVRGILMGMTSILEVPVTVKMRVGWDDKTPTAHKIIPMIQ---------NFSGKGVCAVMIHGRSRLQRYTKSADWNYIREAAASEQSWLRPLPVIGNGDIMSWQDHKQHLDE-----------GGKNMSTCAMVGRGALIKPWLPTEIKEKRDWDISATERLDILK 263          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2S388_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S388_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.910e-65
Identity = 104/195 (53.33%), Postives = 136/195 (69.74%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+N+GCP+D++CDKG GA+LM R +KL+ I+ G+++ L+CP+T+KMR GWDE KP A  +V  +Q         GF G V  VMIHGRSRLQRY+KLA+W Y+  VA SQ   L  +P+IGNGDI S+ D+EE++                  +T  MLARGALIKPWLPTE+KE+R WDIS+SERLDI +
Sbjct:   34 VDFVDLNLGCPLDIMCDKGAGASLMLRDKKLKDIVEGVTNTLSCPVTIKMRTGWDESKPIAHKLVSKIQ-------SWGFDG-VGAVMIHGRSRLQRYTKLANWKYIEVVANSQSDDLPKIPLIGNGDIFSYTDYEEKI-------------ANDSINTTAMLARGALIKPWLPTEIKERRHWDISASERLDILK 207          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: B7G230_PHATC (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G230_PHATC)

HSP 1 Score: 212 bits (539), Expect = 1.090e-62
Identity = 108/195 (55.38%), Postives = 139/195 (71.28%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+N+GCP+D+VC+KG GAALM R ++LR  + G+   LTCP+++KMR GW+  KP A  +V+ +Q         G  G ++ VMIHGRSRLQRY+K ADWDY+  VA SQD +L  +PVIGNGDI S++D EE++  ARE       G  S    C MLARGALIKPWLPTE+KE+R WDIS+SERLDI +
Sbjct:  269 VDFVDLNLGCPLDIVCNKGSGAALMMRDKRLRSSVEGILETLTCPISIKMRTGWEMTKPFAHNLVQKIQ-------SWGLDG-ISAVMIHGRSRLQRYAKEADWDYISMVAKSQDMSLTTIPVIGNGDIFSYQDFEEKI--ARE-------GVNS----CAMLARGALIKPWLPTEIKERRHWDISASERLDILK 442          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2PN00_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PN00_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.260e-61
Identity = 106/196 (54.08%), Postives = 138/196 (70.41%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQR-EADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+N+GCPIDL+CDKG G+ALM R +KL+  + G+S  L+CP TVKMR GW+EK P A  +V  +Q  + D          +A VM+HGRSRLQRYS+LA+WDY+ +VA  Q+  L  +P+IGNGDI S+ D+EE++  ARE         G Q     MLARGALIKPWLPTE+KEKR WDIS+SER+D+ +
Sbjct:  251 VDFVDLNLGCPIDLICDKGAGSALMLRDKKLKASLMGISDALSCPFTVKMRTGWNEKDPIAHKLVNKIQSWQID---------GLAAVMVHGRSRLQRYSRLANWDYISKVATGQNQDLPQIPLIGNGDIFSYTDYEEKV--ARE---------GIQ--ATAMLARGALIKPWLPTEIKEKRHWDISASERMDVLK 424          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: B8BWN9_THAPS (Dus domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN9_THAPS)

HSP 1 Score: 204 bits (518), Expect = 2.900e-61
Identity = 100/195 (51.28%), Postives = 137/195 (70.26%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+N+GCPIDLVC+KG GA+LM R RKL+G + G++  L CP+T+K+R GW+E +P A  +V+T+Q         G+ G +  VMIHGRSRLQRYS+LA+WDY+ +VA  Q   L  +PVIGNGD+ S+ D+E+ +     L+        +  S   ML RGALIKPWLPTE+KE+R WDIS++ERLD+ +
Sbjct:   97 VDFVDMNLGCPIDLVCEKGAGASLMLRERKLKGSVEGLTKTLNCPVTIKIRTGWNENEPIAHKLVQTIQAW-------GYDG-IGAVMIHGRSRLQRYSRLANWDYIAEVAKCQAANLHQIPVIGNGDLFSYTDYEQNV-----LKRVNDCDDSNCLSPTAMLGRGALIKPWLPTEIKERRHWDISATERLDMLK 278          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S0GCX0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCX0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 6.940e-61
Identity = 104/201 (51.74%), Postives = 139/201 (69.15%), Query Frame = 0
Query:    2 DFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQ---DPALKPLPVIGNGDILSWRDHEERLEQARE-LQSQQGEGGG---SQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            DFVD N+GCPIDLVC+KG GA+LM R ++L+ I+  ++  L CP+TVK+R GWD  KP A  +V  +Q         G  G +A VMIHGRSRLQRYS++ADWDY+R+V+  Q   +P L P+P+IGNGDI S+ D++ ++   +E L+  + E      +  ST  M+ARGALIKPWLPTE+KE R WDISSSER D+ +
Sbjct:    1 DFVDCNLGCPIDLVCEKGAGASLMLREKRLKEILTSITGVLRCPVTVKIRTGWDGNKPIAHSLVPKIQGW-------GLEG-IAAVMIHGRSRLQRYSRVADWDYIRRVSKEQSIINPTLPPIPIIGNGDIYSYTDYQTQVMHHQETLEKSENEETPPIINPLSTTAMIARGALIKPWLPTEIKESRHWDISSSERFDMLQ 193          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2XP93_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP93_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.400e-61
Identity = 106/195 (54.36%), Postives = 138/195 (70.77%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+N+GCP+DLVC+KG GAALM R ++L+  +  ++S LTCP T+K+R GWDE KP A  ++  VQ+        G  G  A VMIHGRSRLQRYSKLA+WDY+ QVA SQD  L  +P+IGNGDI S+ ++EE++  ARE             +   MLARGAL+KPWLPTE+KE+R WDIS+SERLD+ +
Sbjct:  327 VDFVDLNLGCPLDLVCNKGAGAALMLRDKRLKECLEEITSALTCPFTIKIRTGWDESKPVAHQLIPKVQKW-------GIDGLSA-VMIHGRSRLQRYSKLANWDYIAQVANSQDSELPRIPIIGNGDIFSFSEYEEKV--AREG-----------INATAMLARGALVKPWLPTEIKERRHWDISASERLDLLK 500          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A1Z5JMB7_FISSO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMB7_FISSO)

HSP 1 Score: 206 bits (524), Expect = 9.860e-61
Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+N+GCP+D++ DKG GAALM R  K++  I G++  L+CP+T+KMR GWD  KP A  +V  +Q+           G V  VMIHGRSRLQRYSK ADWDY+ + A +QD +L  + VIGNGDI S++D+EE         S++G       S+C ML RGALIKPWLPTE+KEKR WDIS++ERLDI +
Sbjct:  303 VDFVDLNLGCPLDIINDKGAGAALMLRQNKVKDAIKGITQTLSCPVTIKMRTGWDMAKPFAHELVAKIQKWG--------MGGVGAVMIHGRSRLQRYSKEADWDYISRAALNQDESLPKIAVIGNGDIFSYKDYEEST-------SREG------ISSCAMLGRGALIKPWLPTEIKEKRQWDISATERLDILK 476          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2RFF3_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFF3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.050e-60
Identity = 106/196 (54.08%), Postives = 134/196 (68.37%), Query Frame = 0
Query:    1 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKP-LPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 195
            +DFVD+NMGCPIDLVC+ G GAALM R  K++ I+ G+++ L+CP+T+KMR GW+E+ P A  ++RT +            G +A  M+HGRSRLQRYSKLADW Y+ +VA   + A  P +P+IGNGDI S  + EE               GG   STCCMLARGALIKPWLPTE+KE+R WDIS+SERLDI R
Sbjct:  323 VDFVDVNMGCPIDLVCNVGAGAALMQRPNKVKQIVRGLTATLSCPITLKMRTGWNERHPMAHNLMRTAEELGQ--------GRIAAFMLHGRSRLQRYSKLADWSYIGEVAKGFEGAPAPSIPIIGNGDIFSHTEWEEHKAM-----------GGI--STCCMLARGALIKPWLPTEIKERRAWDISASERLDILR 497          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK1_ECTSI4.300e-13297.95tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 T... [more]
A0A835ZAB5_9STRA8.320e-7659.18Dus domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2S388_9STRA3.910e-6553.33Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B7G230_PHATC1.090e-6255.38tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (Frag... [more]
A0A7S2PN00_9STRA2.260e-6154.08tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
B8BWN9_THAPS2.900e-6151.28Dus domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S0GCX0_9STRA6.940e-6151.74Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2XP93_9STRA9.400e-6154.36tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A1Z5JMB7_FISSO9.860e-6152.82tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A7S2RFF3_9STRA2.050e-6054.08tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..182
e-value: 5.5E-43
score: 149.1
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 2..185
e-value: 1.6E-32
score: 112.8
NoneNo IPR availablePANTHERPTHR45846FAMILY NOT NAMEDcoord: 2..195
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 2..192
IPR018517tRNA-dihydrouridine synthase, conserved sitePROSITEPS01136UPF0034coord: 4..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15435contigEcto-sp13_S_contig15435:220..3657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15435.4065.1mRNA_Ecto-sp13_S_contig15435.4065.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15435 217..3657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15435.4065.1 ID=prot_Ecto-sp13_S_contig15435.4065.1|Name=mRNA_Ecto-sp13_S_contig15435.4065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKM
RVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSK
LADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQG
EGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
IPR018517tRNA_hU_synthase_CS