mRNA_Ecto-sp13_S_contig15435.4065.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15435.4065.1
Unique NamemRNA_Ecto-sp13_S_contig15435.4065.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: D7FVK1_ECTSI (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK1_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 5.620e-133
Identity = 192/196 (97.96%), Postives = 194/196 (98.98%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCR+RGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVA SQDPAL+PLPVIGNGDILSWRDHEERLEQARELQSQQGEG GSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR
Sbjct:  436 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRKRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAVSQDPALRPLPVIGNGDILSWRDHEERLEQARELQSQQGEGEGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 631          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A835ZAB5_9STRA (Dus domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAB5_9STRA)

HSP 1 Score: 241 bits (616), Expect = 6.110e-76
Identity = 116/197 (58.88%), Postives = 145/197 (73.60%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGS-VARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
             +DFVDINMGCPIDLVC +GMG+ALM + RK+RGI+ GM+S L  P+TVKMRVGWD+K P A  ++  +Q          F G  V  VMIHGRSRLQRY+K ADW+Y+R+ AAS+   L+PLPVIGNGDI+SW+DH++ L++           GG   STC M+ RGALIKPWLPTE+KEKRDWDIS++ERLDI +
Sbjct:   87 SVDFVDINMGCPIDLVCKQGMGSALMNKQRKVRGILMGMTSILEVPVTVKMRVGWDDKTPTAHKIIPMIQ---------NFSGKGVCAVMIHGRSRLQRYTKSADWNYIREAAASEQSWLRPLPVIGNGDIMSWQDHKQHLDE-----------GGKNMSTCAMVGRGALIKPWLPTEIKEKRDWDISATERLDILK 263          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2S388_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S388_9STRA)

HSP 1 Score: 211 bits (538), Expect = 4.060e-65
Identity = 104/195 (53.33%), Postives = 136/195 (69.74%), Query Frame = 1
Query:    4 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            +DFVD+N+GCP+D++CDKG GA+LM R +KL+ I+ G+++ L+CP+T+KMR GWDE KP A  +V  +Q         GF G V  VMIHGRSRLQRY+KLA+W Y+  VA SQ   L  +P+IGNGDI S+ D+EE++                  +T  MLARGALIKPWLPTE+KE+R WDIS+SERLDI +
Sbjct:   34 VDFVDLNLGCPLDIMCDKGAGASLMLRDKKLKDIVEGVTNTLSCPVTIKMRTGWDESKPIAHKLVSKIQ-------SWGFDG-VGAVMIHGRSRLQRYTKLANWKYIEVVANSQSDDLPKIPLIGNGDIFSYTDYEEKI-------------ANDSINTTAMLARGALIKPWLPTEIKERRHWDISASERLDILK 207          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: B7G230_PHATC (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G230_PHATC)

HSP 1 Score: 212 bits (540), Expect = 8.080e-63
Identity = 108/196 (55.10%), Postives = 139/196 (70.92%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
             +DFVD+N+GCP+D+VC+KG GAALM R ++LR  + G+   LTCP+++KMR GW+  KP A  +V+ +Q         G  G ++ VMIHGRSRLQRY+K ADWDY+  VA SQD +L  +PVIGNGDI S++D EE++  ARE       G  S    C MLARGALIKPWLPTE+KE+R WDIS+SERLDI +
Sbjct:  268 NVDFVDLNLGCPLDIVCNKGSGAALMMRDKRLRSSVEGILETLTCPISIKMRTGWEMTKPFAHNLVQKIQ-------SWGLDG-ISAVMIHGRSRLQRYAKEADWDYISMVAKSQDMSLTTIPVIGNGDIFSYQDFEEKI--ARE-------GVNS----CAMLARGALIKPWLPTEIKERRHWDISASERLDILK 442          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2PN00_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PN00_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.190e-61
Identity = 106/197 (53.81%), Postives = 139/197 (70.56%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQR-EADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            ++DFVD+N+GCPIDL+CDKG G+ALM R +KL+  + G+S  L+CP TVKMR GW+EK P A  +V  +Q  + D          +A VM+HGRSRLQRYS+LA+WDY+ +VA  Q+  L  +P+IGNGDI S+ D+EE++  ARE         G Q     MLARGALIKPWLPTE+KEKR WDIS+SER+D+ +
Sbjct:  250 EVDFVDLNLGCPIDLICDKGAGSALMLRDKKLKASLMGISDALSCPFTVKMRTGWNEKDPIAHKLVNKIQSWQID---------GLAAVMVHGRSRLQRYSRLANWDYISKVATGQNQDLPQIPLIGNGDIFSYTDYEEKV--ARE---------GIQ--ATAMLARGALIKPWLPTEIKEKRHWDISASERMDVLK 424          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A1Z5JMB7_FISSO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMB7_FISSO)

HSP 1 Score: 208 bits (530), Expect = 1.320e-61
Identity = 104/196 (53.06%), Postives = 135/196 (68.88%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            K+DFVD+N+GCP+D++ DKG GAALM R  K++  I G++  L+CP+T+KMR GWD  KP A  +V  +Q+           G V  VMIHGRSRLQRYSK ADWDY+ + A +QD +L  + VIGNGDI S++D+EE         S++G       S+C ML RGALIKPWLPTE+KEKR WDIS++ERLDI +
Sbjct:  302 KVDFVDLNLGCPLDIINDKGAGAALMLRQNKVKDAIKGITQTLSCPVTIKMRTGWDMAKPFAHELVAKIQKWG--------MGGVGAVMIHGRSRLQRYSKEADWDYISRAALNQDESLPKIAVIGNGDIFSYKDYEEST-------SREG------ISSCAMLGRGALIKPWLPTEIKEKRQWDISATERLDILK 476          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: B8BWN9_THAPS (Dus domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN9_THAPS)

HSP 1 Score: 204 bits (520), Expect = 1.510e-61
Identity = 100/196 (51.02%), Postives = 138/196 (70.41%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            ++DFVD+N+GCPIDLVC+KG GA+LM R RKL+G + G++  L CP+T+K+R GW+E +P A  +V+T+Q         G+ G +  VMIHGRSRLQRYS+LA+WDY+ +VA  Q   L  +PVIGNGD+ S+ D+E+ +     L+        +  S   ML RGALIKPWLPTE+KE+R WDIS++ERLD+ +
Sbjct:   96 EVDFVDMNLGCPIDLVCEKGAGASLMLRERKLKGSVEGLTKTLNCPVTIKIRTGWNENEPIAHKLVQTIQAW-------GYDG-IGAVMIHGRSRLQRYSRLANWDYIAEVAKCQAANLHQIPVIGNGDLFSYTDYEQNV-----LKRVNDCDDSNCLSPTAMLGRGALIKPWLPTEIKERRHWDISATERLDMLK 278          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2RFF3_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFF3_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.820e-61
Identity = 107/197 (54.31%), Postives = 135/197 (68.53%), Query Frame = 1
Query:    1 KMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKP-LPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            K+DFVD+NMGCPIDLVC+ G GAALM R  K++ I+ G+++ L+CP+T+KMR GW+E+ P A  ++RT +            G +A  M+HGRSRLQRYSKLADW Y+ +VA   + A  P +P+IGNGDI S  + EE               GG   STCCMLARGALIKPWLPTE+KE+R WDIS+SERLDI R
Sbjct:  322 KVDFVDVNMGCPIDLVCNVGAGAALMQRPNKVKQIVRGLTATLSCPITLKMRTGWNERHPMAHNLMRTAEELGQ--------GRIAAFMLHGRSRLQRYSKLADWSYIGEVAKGFEGAPAPSIPIIGNGDIFSHTEWEEHKAM-----------GGI--STCCMLARGALIKPWLPTEIKERRAWDISASERLDILR 497          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S0GCX0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCX0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 7.200e-61
Identity = 104/201 (51.74%), Postives = 139/201 (69.15%), Query Frame = 1
Query:    7 DFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQ---DPALKPLPVIGNGDILSWRDHEERLEQARE-LQSQQGEGGG---SQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            DFVD N+GCPIDLVC+KG GA+LM R ++L+ I+  ++  L CP+TVK+R GWD  KP A  +V  +Q         G  G +A VMIHGRSRLQRYS++ADWDY+R+V+  Q   +P L P+P+IGNGDI S+ D++ ++   +E L+  + E      +  ST  M+ARGALIKPWLPTE+KE R WDISSSER D+ +
Sbjct:    1 DFVDCNLGCPIDLVCEKGAGASLMLREKRLKEILTSITGVLRCPVTVKIRTGWDGNKPIAHSLVPKIQGW-------GLEG-IAAVMIHGRSRLQRYSRVADWDYIRRVSKEQSIINPTLPPIPIIGNGDIYSYTDYQTQVMHHQETLEKSENEETPPIINPLSTTAMIARGALIKPWLPTEIKESRHWDISSSERFDMLQ 193          
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Match: A0A7S2XP93_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP93_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.760e-61
Identity = 106/195 (54.36%), Postives = 138/195 (70.77%), Query Frame = 1
Query:    4 MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQGEGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR 588
            +DFVD+N+GCP+DLVC+KG GAALM R ++L+  +  ++S LTCP T+K+R GWDE KP A  ++  VQ+        G  G  A VMIHGRSRLQRYSKLA+WDY+ QVA SQD  L  +P+IGNGDI S+ ++EE++  ARE             +   MLARGAL+KPWLPTE+KE+R WDIS+SERLD+ +
Sbjct:  327 VDFVDLNLGCPLDLVCNKGAGAALMLRDKRLKECLEEITSALTCPFTIKIRTGWDESKPVAHQLIPKVQKW-------GIDGLSA-VMIHGRSRLQRYSKLANWDYIAQVANSQDSELPRIPIIGNGDIFSFSEYEEKV--AREG-----------INATAMLARGALVKPWLPTEIKERRHWDISASERLDLLK 500          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15435.4065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK1_ECTSI5.620e-13397.96tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 T... [more]
A0A835ZAB5_9STRA6.110e-7658.88Dus domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2S388_9STRA4.060e-6553.33Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B7G230_PHATC8.080e-6355.10tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (Frag... [more]
A0A7S2PN00_9STRA1.190e-6153.81tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A1Z5JMB7_FISSO1.320e-6153.06tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
B8BWN9_THAPS1.510e-6151.02Dus domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S2RFF3_9STRA2.820e-6154.31tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A7S0GCX0_9STRA7.200e-6151.74Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2XP93_9STRA9.760e-6154.36tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15435contigEcto-sp13_S_contig15435:217..3657 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score397.1
Seed ortholog evalue4.7e-108
Seed eggNOG ortholog2880.D7FVK1
Preferred namedus3l
Model size588
KEGG koko:K05544
Hectar predicted targeting categoryother localisation
GOsGO:0002943,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
Exons5
EggNOG free text desc.tRNA dihydrouridine synthase activity
EggNOG OGsCOG0042@1,KOG2333@2759
EC1.3.1.89
Cds size585
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15435.4065.1prot_Ecto-sp13_S_contig15435.4065.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15435 220..3657 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462820.0217621-UTR-Ecto-sp13_S_contig15435:216..2191681462820.0217621-UTR-Ecto-sp13_S_contig15435:216..219Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15435 217..219 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462820.0357168-CDS-Ecto-sp13_S_contig15435:219..3271681462820.0357168-CDS-Ecto-sp13_S_contig15435:219..327Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15435 220..327 +
1681462820.0452962-CDS-Ecto-sp13_S_contig15435:983..10641681462820.0452962-CDS-Ecto-sp13_S_contig15435:983..1064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15435 984..1064 +
1681462820.055292-CDS-Ecto-sp13_S_contig15435:2068..22061681462820.055292-CDS-Ecto-sp13_S_contig15435:2068..2206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15435 2069..2206 +
1681462820.0650892-CDS-Ecto-sp13_S_contig15435:3060..32271681462820.0650892-CDS-Ecto-sp13_S_contig15435:3060..3227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15435 3061..3227 +
1681462820.0747728-CDS-Ecto-sp13_S_contig15435:3566..36571681462820.0747728-CDS-Ecto-sp13_S_contig15435:3566..3657Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15435 3567..3657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15435.4065.1

>prot_Ecto-sp13_S_contig15435.4065.1 ID=prot_Ecto-sp13_S_contig15435.4065.1|Name=mRNA_Ecto-sp13_S_contig15435.4065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKM
RVGWDEKKPNADVVVRTVQREADRCRQRGFPGSVARVMIHGRSRLQRYSK
LADWDYVRQVAASQDPALKPLPVIGNGDILSWRDHEERLEQARELQSQQG
EGGGSQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYR
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mRNA from alignment at Ecto-sp13_S_contig15435:217..3657+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15435.4065.1 ID=mRNA_Ecto-sp13_S_contig15435.4065.1|Name=mRNA_Ecto-sp13_S_contig15435.4065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3441bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15435:217..3657+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGATGGACTTCGTGGACATCAACATGGGCTGTCCGATAGACCTGGTCTG CGACAAGGGCATGGGCGCGGCTCTCATGGGCCGAAGTCGAAAGCTCCGCG GCATCATTGCGGTGAGACCTTGCTTTTCGACCGTTCCAGGAACAGTTCCC GGAACGTTTCCTTCGCAATTCCTTGCCCTCCAGTCAAACTCGGAGGGTGC AATTTTCGACTTGTCGCGCGAGTTTACGGCGGAGACGAGGGTGATGGGGC CGACGAAGCACGTCGTGGTGTTGTCCCGCAGGCTGAAATATATATTTGCA TCGATGAGAGGCCCCGTGGACTGGAAAAAGGTGATAGCACCAACGGGAGC CCCGCAATTAGAAAGGAGTCGCACCGGCGAAAGGCCACGTGGGCTGCGAA AAAGTGATAGTACCAACGGAAGGCCCCGTGGACTGCGAAAAGGTGGCACT AAAACGCTCTTCGCGAGATATATGCAGCAAGAGATACGTGTAATCCATTT GGCCTGTAGTGCCCGTCTCTTGCCCACACATATTTCATTTTCTCGTCATG CTTGGTTTGTGTTGAACAGGGCGTGGCTCCCGCGGCTATTCATGTGTCCA TTACCTCTTTGAAGGTAGCGGCCCGTTTGTTCTTTGCCGTGGAGAGGAAA GTATAAGTGTAGGTCACTGTTGTCTTAACCCTTGCACAACTTTGGAAGGG AATCTCTCAACCGACCGGCCTCCCGCGCCCACGCGTCTTGCGACCCCCCC CCTTGGCGCGCGAGCAGGGCATGTCTTCTCAGCTGACGTGCCCCCTGACG GTGAAGATGAGGGTCGGCTGGGACGAAAAGAAGCCCAACGCGGACGTCGT GAGTGAAAACAACGAACAGAAATAGCCCTTACTAAACCAACCACAGACGG TGGTGTCAGGACCCATCGGCAGGAGGCGTCTGGTGCTAACCCCCCGGTGG TGGCGAGTGAATCGGGGGTCGTGCCGATGGCCTGTGCGCCTGAAAGGTTA TGAGTCCGGCGTATTTAGTTTATTTCCCTCGCTCCAACTCGAGCACCGTG AGCGCACCACAACAGCCGTCTGTTTTTTATTCGCCTGGAAGAGTTGTGAG TCTACTTGCTCGTTGCAACAGTCGTCCGGTTCGTGTTTTTTTTTTCGCCG CTTGACCCTGATGCCGAATGTATGCATGTGTTAACCAGAGCCAGTCGATC GCGCGGAGTCGCTTATTAACCACCGGGGTTCAGAACAAAATGCGGTAGAA ACGCGGGCTGAACCCGCGTCGCCACTCTACTGTTCCTCCTTTCACTATTA TAAGCGTGGTGTGAATAGCACAATATAGTCAAGAGTTGCGCCGAACGGCG GCGTTCCGCTTCTCCTTGTAGCCGATCTCCCGAGTGATTGAGAGCGGGGC GATGTGGTTTTGTTAGCACACGGACTTGAAACCGTGGCAAGCGAGGGCGT GTGTTGGAGTATCGGATATCGCTTCCGTGCGCCTCGATTCGCAGGGACAC TAGAGTCTAGGCGACGGATGAGTAGGCCCTCCAACAGTGATTTCGTTTGA CCTCCTCGAGTGATTTGGCACCAGTATCAAGTGTTTAACGTACGACCTAA ACGCGAAAAATGCACTACTTTATCCGTTTCATTCAGCTGCCTTCCTCTTG TGGCTTTCCCCTAGCGGGGTAGGAGCGGTTCGAGGGTTTGTGAGCGCTGT AAAGCCAGCAGCCGGTTTAACCGCGTGAAAAAACAAAAACTGCTTTGTGT TGTGCCTCCCATGTATGAACTACCATTTTTTCGGTTTGAACCTCCCGTCC GCGCAAACGCCCCGACGCTGATGTCGACCCCGCATCTCCCCCTGTTGTCA AGGTTGTTCGCACGGTACAGCGGGAGGCGGACCGGTGCCGGCAGAGGGGG TTCCCGGGTTCGGTAGCGCGGGTCATGATCCACGGCCGCTCTCGCCTCCA GCGGTATAGCAAGCTGGCTGACTGGGACTATGTCCGTCAGGTACATCGTG TTGTTGTTGGTGTTGTTTTAGTTGGTGGTGCTGCTGTGGTGTTCGTGTGG GTGGAAGTGTTGTTGCGTCGTTGTCACGTGCGCGTTCGTATCTATTTTGT ATTGTTGCGTATCCACAATATATGTCCTGCTCAGCGTACGTCTTCTTGGA CCCTGACTCCCGCGCAAGCTCCCGGCCATCGGACCTTGTCTCCTTCGCCG GTAGTCTTTTTTTTAGTTTTTTTCCCCATTTTAGCCCGCCGCCCGCAGGT TCCAGCTACTATATGACCTTGACGCTCGCCTTTGAATAGTTTTTCGCAAC GTCCCCATACAGAAGGACTCGAGAACTCAATGTACCGTACGACCTGTGTT TCCCTTTTGAACGATCCTTTGCCACATCCATGGTAAGGATGGCGAGCAAA GTGAACACGTGAGACGTTTCGAGACGTTTCAATTGGTAGCCCTGAATGGG TTTGGTCTTGTTTCCACGACGTCTCAGTGGCGTTCATTACCCAATGTGGA TTCCCTTCGGTGTCCGTGCTTGGCTACGGCGGCGCGTAGGGCGTGCATTG CCCCCTGCGCGTGCCCTTTGGTTTTCGGATTTGACCTAAACCTCGAGAAG CGACCGCGCTCTTGGACCTATGAATGCAACGCTCCGTTCAACGACCGGGA GTTATGATGGGATTGAACAAATGTTATGGCAACAAATCGTGTCATGTTAG ACGCCCCACCCGTTTTCTCAAAATCATGCTTTTTGCGGTAGGTCTGCGGC CTAACGCTTTGCAATCCCTACGCCACCCGGCCCGCCGCCGCTCATTTTTG GCCATTGTTTCCACCCCGCAACATCTACCACGCACCCCTCACAGGTGGCT GCGTCTCAAGACCCCGCTCTGAAGCCGCTACCGGTGATAGGCAACGGCGA CATCTTGTCTTGGAGGGACCACGAGGAGCGGCTTGAGCAGGCGAGGGAGC TGCAGTCGCAGCAGGGGGAGGGGGGAGGGAGCCAGTGGAGCACGTGCTGC ATGCTCGCTAGGTGGGTCGAGTGCGTTGAGGGGGTTGTCTGCTGTCGTTC ATGTTCCTTGTTTTATTCGCCTTTGACCTGGCCCGTCCAGAGGAGGGCCC TACCACTGGGAATCATGGACACCCCCAGGATGATTTTTTGTACACACCGG AGTAGGATCTAGTCTGGCAAAGTGAAACCTATCATGTACCTGGTATGTTT TTTTGTGTAGGATCACTCACGAACATGCTTGTACACGGCCCGTCCCGTTG TCCTCTCCTCCCCGTCCCCTGCCCCCTTATTCCTGTCCCCTGTTCTTGGT CTTTTTCCGTCTTTTTTTTTGGAATTATTCGTTTTGTGGATGTGCTGCAG GGGTGCCTTGATTAAGCCGTGGCTACCGACCGAGGTGAAGGAGAAGAGGG ACTGGGACATCTCCTCCTCGGAGAGGCTTGACATCTACAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15435:217..3657+

>mRNA_Ecto-sp13_S_contig15435.4065.1 ID=mRNA_Ecto-sp13_S_contig15435.4065.1|Name=mRNA_Ecto-sp13_S_contig15435.4065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15435:217..3657+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACTTCGTGGACATCAACATGGGCTGTCCGATAGACCTGGTCTGCGA
CAAGGGCATGGGCGCGGCTCTCATGGGCCGAAGTCGAAAGCTCCGCGGCA
TCATTGCGGGCATGTCTTCTCAGCTGACGTGCCCCCTGACGGTGAAGATG
AGGGTCGGCTGGGACGAAAAGAAGCCCAACGCGGACGTCGTTGTTCGCAC
GGTACAGCGGGAGGCGGACCGGTGCCGGCAGAGGGGGTTCCCGGGTTCGG
TAGCGCGGGTCATGATCCACGGCCGCTCTCGCCTCCAGCGGTATAGCAAG
CTGGCTGACTGGGACTATGTCCGTCAGGTGGCTGCGTCTCAAGACCCCGC
TCTGAAGCCGCTACCGGTGATAGGCAACGGCGACATCTTGTCTTGGAGGG
ACCACGAGGAGCGGCTTGAGCAGGCGAGGGAGCTGCAGTCGCAGCAGGGG
GAGGGGGGAGGGAGCCAGTGGAGCACGTGCTGCATGCTCGCTAGGGGTGC
CTTGATTAAGCCGTGGCTACCGACCGAGGTGAAGGAGAAGAGGGACTGGG
ACATCTCCTCCTCGGAGAGGCTTGACATCTACAGG
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