prot_Ecto-sp13_S_contig15430.4064.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15430.4064.1
Unique Nameprot_Ecto-sp13_S_contig15430.4064.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15430.4064.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.560e-17
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0 
Query:   42 RVPRRVGIPTIDQVSIRPCNRRSCSQLVTWSVESFAAAGAVCYHM 86
            RVP R+GIPTIDQ SIRPCNRRSCSQLVTWSVESFA AGA CYHM
Sbjct: 1237 RVPWRLGIPTIDQASIRPCNRRSCSQLVTWSVESFATAGAGCYHM 1281
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15430.4064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJB7_ECTSI1.560e-1788.89GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15430contigEcto-sp13_S_contig15430:342..599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15430.4064.1mRNA_Ecto-sp13_S_contig15430.4064.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15430 342..600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15430.4064.1 ID=prot_Ecto-sp13_S_contig15430.4064.1|Name=mRNA_Ecto-sp13_S_contig15430.4064.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
SRHFLCFRRTYEESLENVCSSAPATTPGKALYLLRADPNSRRVPRRVGIP
TIDQVSIRPCNRRSCSQLVTWSVESFAAAGAVCYHM
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