mRNA_Ecto-sp13_S_contig1542.4059.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1542.4059.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI) HSP 1 Score: 1273 bits (3295), Expect = 0.000e+0 Identity = 2196/2761 (79.54%), Postives = 2263/2761 (81.96%), Query Frame = 1
Query: 1 VGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFGS-KAKIEVPDADVSVPDVAGNVXXXXXXXXXXXXDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSADVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDIDAPSXXXXXXXXXXAGXXXXXEGGVSGELPSGDVSVTASDVEVEGGDSSLTAGLAAGGSAVVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLSFKKPSLKTKAKVPDVDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVDASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----VSGNASVEVSGVSVEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGSKVXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGGLFGSSKAKIEVSDGDVSVPDVSAXXXXXXXXXXXXXXXXXXXVSVPXXSVPDVXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSVDXXXXXXXXXXXXXXXXXXXLAGKMPSAEGGVGGELPSGDVSVTAPDVEVEGGDTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELSSGDVDASVAVPDVPSVDVKKPKKGLFGGLFGSSKAKIEVPDADVAVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDAPSXXXXXXXXXXXXXMPXXXXXXXXXXXXXXSGDVSVTAPDVEVDGGDTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELPSVDADASISVPDVPSADVKKPKKGLFGGLFGSKAKIEVPDADVSVPDVSGEXXXXXXXXXXXXXXX---------TATVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDIDAPSXXXXXXXXXLAGKMPSAEGGVGGELPSGDVSVTAPDVEVEGGDTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELPSGDVDASASVPDVPSVDVKKPKRGLFGGLSFKKPSRKGKAKVPDVDVAAPDVTVEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDADVTMPXXXXXXXXXXXXXXXXXGVAVAMPSIGAEASADMPTVDAEXXXXXXXXXXXXXXXXXXAPSGSVEVPSVDLAGKMXXXEGGVGGELPSGDVSVTTPDVEVEGGNTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAEAPSLGESLTAPEIPSVDVKNPKKNKFGLRKPSFRRKGKTSTQEIPGVDASVDLPSVSGEAAVDLPTASVEAPSIDXXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLSTDVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGGLSFKKPSGKTSIEVRRTXXXXXXXXXXXXXXSAEASVPDVSGSGPDVSVXXXXXXXXXXXXXXXXXXXXGSIKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------DMDAPSXXXXXXXXXXSGKMPEMPSVEGGVGGELPSGDVSATAPDVKAEGGDSSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELPSGDVDATVSVPDVPSVDVEKPKKGLFGGLFGSSKAKIEVPDXXXXXXXXXXXXXXXXAPSGEVDASLPSVGDLSADVGAKMXXXXXXXXXXXXXIAAKAPDVPVPDFSADVSVPGVTVSAPNVSGDVSVXDVAVXXXXXXXXXXXVS----GSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDAPSXXXXXXXXXXSGKMPEMPSVEGGVGGELPSGDVSATAPDVKAEGGDSSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAEVRYVDATVSVPDVPSVDVEKPKKGLFGGLEKCFGSTQPVRGYSLSPDLLECKRVMNIAPPLPLPQVPDVDATVPEVSVXX-VSVDAPSGEVDASLPS----------------------------------VGDLSADVGAKMXXXXXXXXXXXXXI-----------AAKAPDVPVPDFSADVSVP------GVTVSAPNVSGDVSVXDV 7971
VGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFGS K KIEVPDADVSVPDV+ V XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX SADVS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVD+DAPSXXXXXXXXXX G EGGV GELPSGDVSVTA DV+VEGGD+SLTAGLAAGG A VGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLSFKKPSLK KAKVPDVDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVDASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VSG P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGSKVXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFG +FGSSK KIEV D DVSVPDVS XXXXXXXXXXXXXXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXSGSVDXXXXXXX XXXXXXXXXX GGDTSLTAGLAAGG AAVGAIGAAVGLSGDKPDAEL S DVDASV+ PDVPSVDV KPKKGLFGGLFGSSKAKIEVPDADVAVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXX K XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD+DAPSXXXXXXXXXXX MP SGDVSVTAPDV+V+GGDTSLTAGLAAGG AAVGAIGAAVGLSGDKPDAELPS D DAS+S+PDVPS DVKKPKKGLFGGLFGSKAKIEVPDADVSVPDVS + XXXXXXXXXXXXXX + VPDV XXXXXXXXX XXXXXXXXX SV +S XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDIDAPSXXXXXXXXX AGKMPS EGGVGGELPSGDVSVTAPDV+VEG DTSLTAGLAAGG AAVGAIGAAVGLSGDKPDAELPSGDVDAS SVPDVPSVDVKKPKRGLFGGLSFKKP KGKAKVPDVDVAAPDVTV+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDM SVEVKKPK+GLFGGLSFKKPSGKTSIEVPDADVT+P X GV VAMPSIGAEASA MPTV XXXXXXXXXXXXXXXXXXAPSGSVEVPSVDLAGKMXXX GGVGGELPSGDVSVT PDV+VEGG+TSLTAGLAAGG AAVGAIGAAVGLSGDKPDAE PS+ SLTAP+IPSVDVK PKK+KFGL+KPSF +KGKTST EIPGVDASVD+PSV G+AAVDLPTASVEAPS+ XXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLS DVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAP++PSVEVKKPKKGLFGGLSFKKPSGKTS+E PDV S PDV XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+DAPS XXXXXXXXX+GK +PSVEGGVGGELPSGDVS TAPDVK EGG++SLTAGLAAGG AAVGAIGAAVGLSGDKPDAELPSGDVDA+VSVPDVPSV+VEKPKKGLFGGLFGSSKAKIEVPD APSGEV ASLPSV DLSADVGAK+ XIAAKAPD+ VP SA SGDV X XXXXXXXXXXX GSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD+DAPS XXXXXXXXX+GK MPSVEGGVGGELPSGDVS TAPDVK EGGD+SLTAGLAAGG AAVGAIGAAVGLSGDKPDAE VDA+++ PD+PSVDV+KPKK FG L+K P ++ + P++P VD ++ SV +VD P+ V+A PS VGDLSAD+GAK+XXXXXXXXXXXXX +AKAPD+P S +V P G++ P+ V V DV
Sbjct: 2253 VGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFGSSKGKIEVPDADVSVPDVSAGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSVDMDAPSXXXXXXXXXXXGKMPSVEGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLSFKKPSLKGKAKVPDVDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVDASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVSGXXXXXXXXXXXXXPLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGSKVXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGSIFGSSKGKIEVPDADVSVPDVSXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVSVPXXXXXXXSGSVDXXXXXXXAPXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSVDVDASVSAPDVPSVDVNKPKKGLFGGLFGSSKAKIEVPDADVAVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDAPSXXXXXXXXXXXGKMPSVEGGVGGELP---SGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSLPDVPSVDVKKPKKGLFGGLFGSKAKIEVPDADVSVPDVSADVXXXXXXXXXXXXXXXXXXXXXSGSLKVPDVG-DXXXXXXXXXLPDVSGPEVXXXXXXXXXSGDVSVXXVSXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDIDAPSXXXXXXXXXXAGKMPSVEGGVGGELPSGDVSVTAPDVKVEGDDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKRGLFGGLSFKKPPLKGKAKVPDVDVAAPDVTVDA----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMSSVEVKKPKRGLFGGLSFKKPSGKTSIEVPDADVTVPDVSASDXAVPDV-----GVDVAMPSIGAEASAAMPTVXXXXXXXXXXXXXXXXXXXXXAPSGSVEVPSVDLAGKMXXXXGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAETPSVDASLTAPDIPSVDVKKPKKSKFGLKKPSFMKKGKTSTPEIPGVDASVDVPSVIGDAAVDLPTASVEAPSMXXXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSVEG-----------------------PDVGASVPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDAPSGXXXXXXXXXAGK---IPSVEGGVGGELPSGDVSVTAPDVKVEGGNTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVEVEKPKKGLFGGLFGSSKAKIEVPDVDATVPEVSVPDVSVDAPSGEVGASLPSVDDLSADVGAKVGDLKADLEAKVDXIAAKAPDLSVPGVSAXXXXXXXXXXXXXXSGDVXXXXXXXXXXXXXXXXXXXXXXXXGSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDAPSGXXXXXXXXXAGK---MPSVEGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAEAPSVDASLTAPDIPSVDVKKPKKSKFG-LKK--------------PSFMKKGKTST-------PEIPGVDTSIDVPSVSGDAAVDLPTASVEA--PSMXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXVGDLSADIGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMP----SVEVKKPKKGLFGGLSFKKPSGKTSVEVPDV 4899
BLAST of mRNA_Ecto-sp13_S_contig1542.4059.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE) HSP 1 Score: 577 bits (1486), Expect = 6.190e-162 Identity = 1102/1523 (72.36%), Postives = 1125/1523 (73.87%), Query Frame = 1
Query: 652 SVDIDAPSXXXXXXXXXXAGXXXXXEGGVSGELPSGDVSVTASDVEVEGGDSSLTAGLAAGGSAVVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLSFKKPSLKTKAKVPDVDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVDASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNASVEVSGVSVEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------VGDLSADVGSKVXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGGLFGSSKAKIEVSDGDVSVPDVSAXXXXXXXXXXXXXXXXXXXVSVPXXSVPDVXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSVDXXXXXXXXXXXXXXXXXXXLAGKMPSAEGGVGGELPSGDVSVTAPDVEVEGGDTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELSSGDVDASVAVPDVPSVDVKKPKKGLFGGLFGSSKAKIEVPDADVAVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDAPSXXXXXXXXXXXXXMPXXXXXXXXXXXXXXSGDVSVTAPDVEVDGGDTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELPSVDADASISVPDVPSADVKKPKKGLFGGLFGSKAKIE------------VPDADVSVPDVSGEXXXXXXXXXXXXXXXTATVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC---------SVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------SVDIDAPSXXXXXXXXXLAGKMP---SAEGGVGGELPSGDVSVTAPDVEVEGGDTSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELPSGDVDASASVPDVPSVDVKKPKRGLFGGLSFKKPSRKGKAKVPDVDVAAPDVTVEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDADVTMP 4680
SVDIDAPSXXXXXXXXX AG EGGV GELPSGDVSVTA DV+VEGGD+SLTAGLAA G A VGA+GAAV LSGDKPDA+LPSGDVDASVSVPDVPS+DVKKP+KGLFGGLSFKKPSLK KA VPDVDVAA XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX D XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V DLSADVGSKV XXXXXXXXXXXXXSA PEVPSVEVKKPKKGLFGGLFGSSKAKIEV D DVSVPDV+AXXXXXXXXXXXXXXXXXXX XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGSVD LAGKMP +PSG VSVTAPDV+VEGGD+SLTAGLAAGG AAVGAIGAAVGLSGDKPDAEL SGDVDASV VPDVPSVDVKKPKKGLFGGLFGSSKAK+EVPDADVA+PDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMDAPSXXXXXXXXXX MP SGDVSVT PDV+V+GGDTSLTAGLAAGG AAVGAIGAAVGLSGDKPDAELPS D DAS+SVPDVPS DVKKPKKGLFGGLFGSKAKIE VPDADVSVPD S XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVD+DAPSXXXXXXXXXLAGKMP S EGGVGGELPSGDVSVTAPDV+ EGGDTSLTAGLAAGG AAVGAIGAAVGLSGDKPDAELPSGDVDA+ SVPDVPSVDVKKPKRGLFGGLSFKKPS KGKAKVPDVDVA PDVTV+APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX VG LSADVGA XXXXXXXXXXXXXXXXXXXXXXXXXSA AP +PSVEVKKPKKGLFGGLSFKKPSGKTSIEVPD V++P
Sbjct: 1696 SVDIDAPSXXXXXXXXXLAGKMPSVEGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAASGVAAVGAVGAAVDLSGDKPDAKLPSGDVDASVSVPDVPSLDVKKPRKGLFGGLSFKKPSLKGKAMVPDVDVAAPNXXXXXXXXXXXXXXXXXXXEVSVPDVSVTXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXSGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSDLSADVGSKVGXXXXXXXXXXXXXSANTPEVPSVEVKKPKKGLFGGLFGSSKAKIEVPDADVSVPDVAAXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPDVSGSVDAPSGSVEVPSVD-------LAGKMPG--------MPSGGVSVTAPDVKVEGGDSSLTAGLAAGGMAAVGAIGAAVGLSGDKPDAELPSGDVDASVTVPDVPSVDVKKPKKGLFGGLFGSSKAKMEVPDADVAMPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV---------------------------DMDAPSXXXXXXXXXXAGKMPSVEGGFGGELP---SGDVSVTTPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFGSKAKIEASSSLKRRRARRVPDADVSVPDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDMDAPSXXXXXXXXXLAGKMPEMPSVEGGVGGELPSGDVSVTAPDVKFEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDANVSVPDVPSVDVKKPKRGLFGGLSFKKPSFKGKAKVPDVDVATPDVTVDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADASLXXXXXXXXXXXXXXXXXXXS--------------VGGLSADVGATXXXXXXXXXXXXXXXXXXXXXXXXXXSATAPGVPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDVGVSVP 3148
BLAST of mRNA_Ecto-sp13_S_contig1542.4059.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.140e-41 Identity = 208/487 (42.71%), Postives = 234/487 (48.05%), Query Frame = 1
Query: 5080 DAEAPSLGESLTAPEIPSVDVKNPKKNKFGLRKPSFRRKGKTSTQEIPGVDASVDLPSVSGEAAVDLPTASVEAPSIDXXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLSTDVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGGLSFKKPSGKTSIEVRRTXXXXXXXXXXXXXXSAEASVPDVSGSGPDVSVXXXXXXXXXXXXXXXXXXXXGSIKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDAPSXXXXXXXXXXSGKMPEMPSVEGGVGGELPSGDVSATAPDVKAEGGDSSLTAGLAAGGAAAVGAIGAAVGLSGDKPDAELPSGDVDATVSVPDVPSVDVEKPKKGLFGGL 6540
DAEAP + SLT PE+PSVDVK P+K+KFG + P F ++GKTST EIPGVDAS+D+PS+SG +V++P SV+ PSID XXXXXXXXXXX XXXXXXXXXXXXXXX VGDLS DVGAK XXXXXXXXXXXXXXXXXXXXXXXXXSAKAP V SVEV+KPKK + GGLS KKPSGK SI VPD MPEMPS+EGG GGEL VS TAPDV+ EGGD+SLTAGLAA G A VGAIGAAVGLSGDKPDAE+PSG V ++S+P+ SVD+ KP+K LFGGL
Sbjct: 541 DAEAPLVDASLTYPEVPSVDVKKPQKSKFGQKNPQFMKEGKTSTPEIPGVDASIDVPSISGNTSVEVPGVSVDTPSIDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGDLSADVGAKAXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPGVKSVEVRKPKKDVLGGLSLKKPSGKISI-----------------------GVPD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPEMPSLEGGAGGELSPSGVSVTAPDVQVEGGDTSLTAGLAASGVAIVGAIGAAVGLSGDKPDAEVPSGVVHVSLSIPEA-SVDIRKPRKVLFGGL 820
BLAST of mRNA_Ecto-sp13_S_contig1542.4059.1 vs. uniprot
Match: D8LGV2_ECTSI (Similar to AHNAK nucleoprotein isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV2_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 4.210e-7 Identity = 89/256 (34.77%), Postives = 112/256 (43.75%), Query Frame = 1
Query: 4933 ELP-SGD---VSVTTPDVEV-EGG--------NTSLTAGLAAGGAAAV--GAIGAAVGL---SGDKPDAE--APSLGESLTAP-EIPSVDVKNPKKNKFGLRKPSFRRKGKTSTQEIPGVDASVDLPSVSGEAAVDLPTASVEAPSIDXXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLSTDVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGGLSFKKPS---GKTSIEV 5628
E+P SGD +SV P+ V EGG + + AGL G AAA GA+ AVG +G DAE P + L A + PS K KK+KFGLRKPSF ++ K+ST E+P DAS + S +G+ L +AS+E PS S PS VGD +T+ G S E KKPK+GLFGGLS KK S GK +EV
Sbjct: 134 EVPFSGDTPPLSVAIPEKGVAEGGXXXXXXDASIATAAGLDLGDAAAAVSGAVNDAVGAGQSNGQPDDAERQTPLVDAGLAATSDAPSSASKKGKKSKFGLRKPSFLKRTKSSTSEVPASDASGGVLSSAGDTP--LSSASLETPS---------GYVHASTPSSSAQSV----------VGDPTTEEGTSTGA-------------------------------SAEAKKPKRGLFGGLSLKKKSSSKGKGKLEV 337
BLAST of mRNA_Ecto-sp13_S_contig1542.4059.1 vs. uniprot
Match: A0A6H5JBA2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA2_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 1.170e-5 Identity = 88/243 (36.21%), Postives = 109/243 (44.86%), Query Frame = 1
Query: 4930 GELPSGDVSVTTPDV-EVEGGNTSLTAGLAA---GGAAAVGAIGAAVGLSGDKPD---AEAPSLGESLTAP-EIPSVDVKNPKKNKFGLRKPSFRRKGKTSTQEIPGVDASVDLPSVSGEAAVDLPTASVEAPSIDXXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLSTDVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPEVPSVEVKKPKKGLFGGLSFKKPS--GKTSIEV 5628
G++P V++ V EV GG + A A GGAA A+ A G S D+PD + P + L A + PS K KK+KFG R PSF RK K+ST E+P DAS +PS +G+ T XXXXXXXXXXX S S GD +T+ GA S E KKPK+GLFGGLS KK S GK+ +EV
Sbjct: 1261 GDIPPLSVAIREKGVAEVGGGGDASDATAAVLDLGGAAINDAV--AAGQSNDQPDDAERQTPLVDAGLAATFDAPSSASKKGKKSKFGFRTPSFLRKSKSSTSEVPASDASGGVPSSAGD------TXXXXXXXXXXXXXXXXXXXXSSAQSVG---------------GDPTTEEGASTGA-------------------------------SAEAKKPKRGLFGGLSLKKSSSKGKSKLEV 1449 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1542.4059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1542.4059.1 >prot_Ecto-sp13_S_contig1542.4059.1 ID=prot_Ecto-sp13_S_contig1542.4059.1|Name=mRNA_Ecto-sp13_S_contig1542.4059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2860bp VGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFGSKAKIEback to top mRNA from alignment at Ecto-sp13_S_contig1542:2..16712- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1542.4059.1 ID=mRNA_Ecto-sp13_S_contig1542.4059.1|Name=mRNA_Ecto-sp13_S_contig1542.4059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=16711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1542:2..16712- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1542:2..16712- >mRNA_Ecto-sp13_S_contig1542.4059.1 ID=mRNA_Ecto-sp13_S_contig1542.4059.1|Name=mRNA_Ecto-sp13_S_contig1542.4059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=8580bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1542:2..16712- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |