mRNA_Ecto-sp13_S_contig15416.4056.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15416.4056.1
Unique NamemRNA_Ecto-sp13_S_contig15416.4056.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.780e-84
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 1 
Query:   25 ILSRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            I SRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMF+DKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSK  SYLGPREWSPLARWTFREFNE+
Sbjct:  182 IASRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFSDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSK--SYLGPREWSPLARWTFREFNEL 322
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 8.570e-83
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 1 
Query:   25 ILSRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            I SRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMF+DKFTIRTQFLQDVRAL+ARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSK  SYLGPREWSPLARWTFREFNE+
Sbjct:  191 IASRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFSDKFTIRTQFLQDVRALKARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSK--SYLGPREWSPLARWTFREFNEL 331
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A836CNL2_9STRA (Autophagy protein Apg9-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL2_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.710e-49
Identity = 91/146 (62.33%), Postives = 111/146 (76.03%), Query Frame = 1 
Query:   31 SRIMRKENYLIAMLNKEILKLSLPLPFFGS-----RGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            SRIMR+ENY+IA++NK +L+L +P+P  GS     R R    A      LTKSLEWS+ FCVL+H+FN KFT+R  FL+D  AL+ R + VGLA + L+PFLLLFMV+YFFLQNAQEWH+SK   YLGPREWSPLA WTFREFNE+
Sbjct:  365 SRIMRRENYIIALVNKRVLQLGVPIPSLGSILGGGRARAHTHAHARTPRLTKSLEWSLRFCVLSHLFNHKFTLRRDFLEDRAALQRRFLAVGLAQLALMPFLLLFMVMYFFLQNAQEWHASK--DYLGPREWSPLANWTFREFNEL 508
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A7S3XNV8_HETAK (Autophagy-related protein 9 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNV8_HETAK)

HSP 1 Score: 152 bits (385), Expect = 6.140e-41
Identity = 81/154 (52.60%), Postives = 108/154 (70.13%), Query Frame = 1 
Query:    1 PPPRPPS--HILSRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKF-TIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            P P PP+   +  R++R+ENYL+A++N  +L LS+PLPF G+ GRGT  A T   YLT++LEWS+H C+L+ MF      +R  F +DV ALR RL   GL H++LLPF L+F+  + FL++AQEWH+    SYLGPREWS  ARW FREFNE+
Sbjct:  314 PAPTPPTAQDVAGRVLRRENYLVALVNCGVLDLSVPLPFLGAVGRGTWAARTEGFYLTRTLEWSIHHCLLHQMFAPGARALRRAFAEDVGALRRRLRTAGLVHLLLLPFALVFLATHTFLRHAQEWHAEG--SYLGPREWSNYARWAFREFNEL 465
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: F0YN89_AURAN (Autophagy-related protein 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN89_AURAN)

HSP 1 Score: 152 bits (385), Expect = 1.310e-40
Identity = 78/143 (54.55%), Postives = 101/143 (70.63%), Query Frame = 1 
Query:   25 ILSRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            I  RIMRKENYLIAMLN   L L+LPLP   +    +L     R  LTK+LEWS+H C+L+H+F+ +F +R  FL++  ALR R V  GL HV L+PF+ +FM ++FFL +AQEWH  K   YLGPREWSP+A+W+FRE NE+
Sbjct:  168 IACRIMRKENYLIAMLNANTLDLTLPLPTLFTGRVSSLDTIAARARLTKTLEWSIHSCLLDHIFSRRFVVRRAFLENEMALRRRFVRAGLVHVALVPFVAVFMTMHFFLLHAQEWHDKK--HYLGPREWSPVAQWSFRELNEL 308
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: W7TMH9_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.240e-38
Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 1 
Query:   25 ILSRIMRKENYLIAMLNKEILKLSLPLP------------FFGSRGR-GTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            I +RIMR+EN+L+A++++ +L L LP P              G  GR G +      ++LT++L+WS+H CVLN MF +KFT+R  FL D   LR R V VG+A + L+PFLL+FMV+ FFLQNAQ W   K  +YLGPR+WSPLA+W FRE+NE+
Sbjct:  315 IAARIMRRENFLVALIHRRVLDLVLPRPAVLVSEVAAAGGMAGPGGREGRVPPRPQEEFLTRNLQWSLHVCVLNDMFTEKFTLRRDFLSDEAGLRRRFVWVGVAQLALMPFLLVFMVIQFFLQNAQAWQQKK--NYLGPRQWSPLAQWRFREYNEL 468
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A4D9D5X3_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5X3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.650e-38
Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 1 
Query:   25 ILSRIMRKENYLIAMLNKEILKLSLPLP------------FFGSRGR-GTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            I +RIMR+EN+L+A++++ +L L LP P              G  GR G +      ++LT++L+WS+H CVLN MF +KFT+R  FL D   LR R V VG+A + L+PFLL+FMV+ FFLQNAQ W   K  +YLGPR+WSPLA+W FRE+NE+
Sbjct:  311 IAARIMRRENFLVALIHRRVLDLVLPRPAVLVSEVAAAGGMAGPGGREGRVPPRPQEEFLTRNLQWSLHVCVLNDMFTEKFTLRRDFLSDEAGLRRRFVWVGVAQLALMPFLLVFMVIQFFLQNAQAWQQKK--NYLGPRQWSPLAQWRFREYNEL 464
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A7S1ZF57_TRICV (Autophagy-related protein 9 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF57_TRICV)

HSP 1 Score: 135 bits (341), Expect = 2.600e-37
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 1 
Query:   37 IMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            IMRKEN++I+ +N+++L LSLP P              GRQY +KSLEWS++FCVL +MFN K+ IR  F  D  +L+ R  L  + H + +PFLLLFM ++F +Q+  +W +SK   YLGPREWS +A W FREFNE+
Sbjct:   38 IMRKENFMISFMNRQMLDLSLPYPML-----------RGRQYFSKSLEWSIYFCVLTYMFNHKYKIRPAFFIDSDSLKRRFTLCAIVHAIFMPFLLLFMTLHFSMQHVYDWKASK--RYLGPREWSSVALWKFREFNEL 163
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A7S1ZTJ2_9STRA (Autophagy-related protein 9 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTJ2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.240e-35
Identity = 68/143 (47.55%), Postives = 100/143 (69.93%), Query Frame = 1 
Query:   25 ILSRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            +  RI+RKEN+++A +NK+++ L +PLPF G+            Q  +KSLE S++FC+L++MFN K+ +R  F  D  +L+ R V+ G+AH V +PFLLLFM+++FF+ +  +W SS  R YLGPREWS  A+WTFREFNE+
Sbjct:  154 VTQRILRKENFMVAFINKDLIDLKVPLPFVGNI-----------QCFSKSLEVSIYFCILSYMFNHKYQVRPTFYMDPTSLKRRFVVCGVAHAVFMPFLLLFMMLHFFMSHMYDWRSS--RQYLGPREWSDYAKWTFREFNEL 283
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BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Match: A0A7S4JPS5_9STRA (Autophagy-related protein 9 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPS5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.260e-35
Identity = 69/139 (49.64%), Postives = 100/139 (71.94%), Query Frame = 1 
Query:   37 IMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNEV 453
            IMRKEN+++A +N+ +L L+LPLP         +    G+++ +KSLEWSM+F +L++MFN K+ IR  F  +  +LR R V+  +AH V LPFLLLFM+++F +Q+  +W SSK+  YLGPREWS +A+WTFREFNE+
Sbjct:  126 IMRKENFMVAFVNRSMLDLTLPLPL-------NVGPLRGKEFFSKSLEWSMYFSILSYMFNHKYKIRPAFYMEPTSLRRRFVVCAVAHAVFLPFLLLFMMLHFSMQHLYDWKSSKM--YLGPREWSHVAKWTFREFNEL 255
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15416.4056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9U8_9PHAE3.780e-8496.50Autophagy-related protein 9 n=1 Tax=Ectocarpus sp.... [more]
D7FZF2_ECTSI8.570e-8395.80Autophagy-related protein 9 n=1 Tax=Ectocarpus sil... [more]
A0A836CNL2_9STRA4.710e-4962.33Autophagy protein Apg9-domain-containing protein n... [more]
A0A7S3XNV8_HETAK6.140e-4152.60Autophagy-related protein 9 (Fragment) n=1 Tax=Het... [more]
F0YN89_AURAN1.310e-4054.55Autophagy-related protein 9 n=1 Tax=Aureococcus an... [more]
W7TMH9_9STRA2.240e-3849.36Autophagy-related protein 9 n=1 Tax=Nannochloropsi... [more]
A0A4D9D5X3_9STRA3.650e-3849.36Autophagy-related protein 9 n=1 Tax=Nannochloropsi... [more]
A0A7S1ZF57_TRICV2.600e-3748.92Autophagy-related protein 9 (Fragment) n=1 Tax=Tri... [more]
A0A7S1ZTJ2_9STRA1.240e-3547.55Autophagy-related protein 9 n=1 Tax=Ditylum bright... [more]
A0A7S4JPS5_9STRA2.260e-3549.64Autophagy-related protein 9 n=1 Tax=Odontella auri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15416contigEcto-sp13_S_contig15416:2633..4088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score272.3
Seed ortholog evalue1.3e-70
Seed eggNOG ortholog2880.D7FZF2
Preferred nameATG9A
Model size453
KEGG koko:K02349,ko:K17907,ko:K19672
KEGG TC9.A.15.1
KEGG Pathwayko04136,ko04137,ko04138,ko04140,map04136,map04137,map04138,map04140
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000045,GO:0000139,GO:0000272,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000407,GO:0000421,GO:0000422,GO:0001817,GO:0001818,GO:0001894,GO:0001932,GO:0001934,GO:0002165,GO:0002376,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006914,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007552,GO:0007586,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009251,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010498,GO:0010562,GO:0010604,GO:0010623,GO:0010646,GO:0010647,GO:0010648,GO:0010669,GO:0012501,GO:0012505,GO:0012506,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016052,GO:0016192,GO:0016236,GO:0016237,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019954,GO:0022411,GO:0022600,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030054,GO:0030154,GO:0030163,GO:0030277,GO:0030587,GO:0030659,GO:0031090,GO:0031152,GO:0031153,GO:0031224,GO:0031288,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032258,GO:0032268,GO:0032270,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032588,GO:0032648,GO:0032688,GO:0032872,GO:0032874,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034497,GO:0034599,GO:0034613,GO:0034727,GO:0035069,GO:0035096,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042592,GO:0042594,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0043632,GO:0043933,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0044804,GO:0044805,GO:0045087,GO:0045937,GO:0046328,GO:0046330,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051603,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055037,GO:0055114,GO:0060033,GO:0060249,GO:0060255,GO:0060729,GO:0061709,GO:0061723,GO:0061726,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070302,GO:0070304,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071704,GO:0071840,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090382,GO:0090702,GO:0097708,GO:0098542,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0098805,GO:0098827,GO:0098852,GO:0099120,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902532,GO:1902533,GO:1903008,GO:1905037
Exons3
EggNOG free text desc.process utilizing autophagic mechanism
EggNOG OGsKOG2173@1,KOG2173@2759
EC2.7.7.7
Cds size453
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029,ko03036,ko03400,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462819.3438928-CDS-Ecto-sp13_S_contig15416:2632..26961681462819.3438928-CDS-Ecto-sp13_S_contig15416:2632..2696Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15416 2633..2696 -
1681462819.3620265-CDS-Ecto-sp13_S_contig15416:3214..33781681462819.3620265-CDS-Ecto-sp13_S_contig15416:3214..3378Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15416 3215..3378 -
1681462819.3759527-CDS-Ecto-sp13_S_contig15416:3863..40881681462819.3759527-CDS-Ecto-sp13_S_contig15416:3863..4088Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15416 3864..4088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15416.4056.1prot_Ecto-sp13_S_contig15416.4056.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15416 2633..4088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15416.4056.1

>prot_Ecto-sp13_S_contig15416.4056.1 ID=prot_Ecto-sp13_S_contig15416.4056.1|Name=mRNA_Ecto-sp13_S_contig15416.4056.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=151bp
PPPRPPSHILSRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATT
GRQYLTKSLEWSMHFCVLNHMFNDKFTIRTQFLQDVRALRARLVLVGLAH
VVLLPFLLLFMVVYFFLQNAQEWHSSKVRSYLGPREWSPLARWTFREFNE
V
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mRNA from alignment at Ecto-sp13_S_contig15416:2633..4088-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15416.4056.1 ID=mRNA_Ecto-sp13_S_contig15416.4056.1|Name=mRNA_Ecto-sp13_S_contig15416.4056.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15416:2633..4088- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCCCCCCCGCCCGCCCTCCCACATTCTCAGCCGAATTATGCGCAAGGA
GAACTACCTGATCGCGATGCTGAACAAGGAGATACTGAAGCTCTCCCTGC
CGCTACCGTTCTTCGGGAGCCGCGGTCGAGGGACCCTGTGGGCCACGACG
GGGCGGCAGTACCTGACCAAGAGCCTGGAGTGGAGCATGCACTTCTGCGT
GCTAAACCACATGTTTAACGACAAGGTGATGTGCAGATGGACGAACGAAG
TTGCTTTGCGATTGTACGAGTGAAAGAGATCTCTGTGAGTGTGTGTGTGT
GTGTCGTCTTTTTTTTATTAGCATCGACCGCGCTCACAGATGACCAACGA
GCAGACGTTAGTCTCAGGTACGGCTGGTTTGTGTGCGTGTGTCTTTTTTG
TTAAATAGCATCAACCACGCTAACTGGCTGGCGTATGAAAAGACGTCAAT
CCCAGAAGTGAGTGCGGCTGAAGATATGAAATGCTTCGGAACGCCATGTT
CTGGGACCCCCGTTAGTCGGCGTGTGTGTGTGCGTGTGTATCTTCTTTGT
TGTAGCATCGACCGCGCCAACCGACTGACGCAGGAAGCGCGTGTGTGTGA
GTGTCTTTTTCTTAGAACCATCGACCGCGCTGACCAATGACAAGATACAA
TGACGATGTTCGTCTTGCCTCGCCGTGCTTTGTTTTCTCGCTGCGCGTGG
AACGAATCAGTTCACCATCCGGACACAGTTCCTCCAGGATGTCCGGGCGC
TCAGGGCCAGGCTTGTCCTGGTGGGCCTCGCGCACGTGGTGCTGCTGCCG
TTCCTGCTGCTCTTCATGGTGGTGTACTTCTTCCTGCAGAACGCCCAAGA
GTGGCACTCTAGCAAGGTCAGATCGTATGGCGCCTACGCAAGATAAACAC
AACCCCCGCATCATAAGATATATGCACACTCACGCGAGTACCACGCCCGC
TGGTAGGTCTTTTTAGAGGTTGGCATGAATCCAAAGCATGAATCTACCCT
CAGATCAAGTAACAGGCGACATGAGATACGTACCATCCACACAGTGGACG
CGCAAAAACAGTTTTTGTTTGCTTCAGAGGCCAAAATGTTAGATACCGCA
GGAGAGGGGAGGGGGGAGTTCTTGCGTCATGTACGGTAGCCCACTGGCTC
CGGGTTTGTGTTAGGTACACAGCTCCGAGTGTGTCTGTCTCTCACCACTA
CACGGCCTTAAACATGCCCCCCTTAGTTGTTTGCACGATGCGTCTTTCGT
CACGAGTCGAAACTTGCGTGTGAGTGCGGCATAGTACATGTCGCTTCGGG
AGAGAACCCGTTGCACTTGACCATGCTTGAGCCTCCCCCTCCCCTCTCTC
ATTTATCGCTCTTTCGACGAAACCGTACCGAAAACGACAGAGCTATCTTG
GGCCGCGCGAGTGGAGCCCGCTGGCGAGGTGGACATTCCGGGAGTTCAAC
GAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15416:2633..4088-

>mRNA_Ecto-sp13_S_contig15416.4056.1 ID=mRNA_Ecto-sp13_S_contig15416.4056.1|Name=mRNA_Ecto-sp13_S_contig15416.4056.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=453bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15416:2633..4088- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCCCCCCCGCCCGCCCTCCCACATTCTCAGCCGAATTATGCGCAAGGA
GAACTACCTGATCGCGATGCTGAACAAGGAGATACTGAAGCTCTCCCTGC
CGCTACCGTTCTTCGGGAGCCGCGGTCGAGGGACCCTGTGGGCCACGACG
GGGCGGCAGTACCTGACCAAGAGCCTGGAGTGGAGCATGCACTTCTGCGT
GCTAAACCACATGTTTAACGACAAGTTCACCATCCGGACACAGTTCCTCC
AGGATGTCCGGGCGCTCAGGGCCAGGCTTGTCCTGGTGGGCCTCGCGCAC
GTGGTGCTGCTGCCGTTCCTGCTGCTCTTCATGGTGGTGTACTTCTTCCT
GCAGAACGCCCAAGAGTGGCACTCTAGCAAGGTCAGATCCTATCTTGGGC
CGCGCGAGTGGAGCCCGCTGGCGAGGTGGACATTCCGGGAGTTCAACGAG
GTA
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